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2023-04-25gnu: scribus: Fix build with latest poppler.Ricardo Wurmus
* gnu/packages/patches/scribus-1.5.8-poppler-22.03.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.04.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.09.0.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.2.0-1.patch, gnu/packages/patches/scribus-1.5.8-poppler-22.2.0-2.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/scribus.scm (scribus)[source]: Add patches. [arguments]: Enable WANT_CPP17 option.
2023-04-24gnu: gnucash: Update help installation prefix.Maxim Cournoyer
The help installation prefix was changed upstream to match the XDG 'help-spec' specification (see: https://www.freedesktop.org/wiki/Specifications/help-spec/). * gnu/packages/gnucash.scm (gnucash) [arguments]: Adjust install-docs phase.
2023-04-24gnu: python-tlsh: Fix build.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-tlsh) [build-system]: Switch to python-build-system. [arguments]: Remove #:out-of-source. Remove install phase override. Add a configure, chdir and adjust the check phase override. [inputs]: Delete field. [native-inputs]: New field.
2023-04-24gnu: sicp: Fix build.Maxim Cournoyer
* gnu/packages/scheme.scm (sicp) [build-system]: Use copy-build-system. [native-inputs]: Remove source input. [arguments]: Remove #:modules and #:builder arguments. Add #:install-plan and #:phases arguments. Patch out obsolete call.
2023-04-24gnu: python-pdbpp: Update to 0.10.3-0.e1c2e34.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-pdbpp): Update to 0.10.3-0.e1c2e34. [arguments]: Add pretend-version phase.
2023-04-24gnu: docker-compose: Use python-jsonschema-3 to fix build.Maxim Cournoyer
* gnu/packages/docker.scm (docker-compose) [inputs]: Replace python-jsonschema with python-jsonschema-3.
2023-04-24gnu: Add python-jsonschema-3.Maxim Cournoyer
* gnu/packages/python-xyz.scm (python-jsonschema-3): New variable.
2023-04-24Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-04-24gnu: emacs-git-timemachine: Update to 4.11-0-13769fb6.Janneke Nieuwenhuizen
This fixes #62932; command-execute: Symbol’s function definition is void: define-transient-command * gnu/packages/emacs-xyz.scm (emacs-git-timemachine)[source]: Update outdated source URI. Update to commit "13769fb603ae88c64566529eae4525ce88026e86". The 4.11 latest release is four years old.
2023-04-24gnu: python-plotly-2.4.1: Patch for Python 3.10 changes.Ricardo Wurmus
* gnu/packages/graph.scm (python-plotly-2.4.1)[arguments]: Add phase 'python-compatibility.
2023-04-24gnu: multiqc: Update to 1.14.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.14. [build-system]: Use pyproject-build-system. [arguments]: Simplify check phase; restore sanity-check phase. [propagated-inputs]: Add python-rich-click. [native-inputs]: Update test data.
2023-04-24gnu: Add python-rich-click.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-rich-click): New variable.
2023-04-24gnu: macs: Patch version check for Python.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (macs)[source]: Patch check for Python > 3.6.
2023-04-24gnu: salmon: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (salmon): Update to 1.10.1. [inputs]: Replace cereal-1.3.0 with cereal; add htscodecs. [native-inputs]: Update hash of pufferfish sources.
2023-04-24gnu: Add htscodecs.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (htscodecs): New variable.
2023-04-24gnu: cereal-1.3.0: Update doctest.h.Ricardo Wurmus
* gnu/packages/serialization.scm (cereal-1.3.0)[native-inputs]: Add gcc-10 and the sources of the cereal package. [arguments]: Add a phase to replace the included doctest.h with the variant from the cereal sources; disable -Werror. [source]: Delete included doctest.h.
2023-04-24gnu: cereal: Use GCC 10.Ricardo Wurmus
* gnu/packages/serialization.scm (cereal)[native-inputs]: Add gcc-10.
2023-04-24guix-install.sh: Fix GUIX_ALLOW_OVERWRITE condition.Maxim Cournoyer
Before this change, the "Overwriting existing installation!" would be displayed erroneously. * etc/guix-install.sh (sys_create_store): Fix overwrite conditional.
2023-04-24gnu: python-check-manifest: Update to 0.49.John Kehayias
* gnu/packages/python-xyz.scm (python-check-manifest): Update to 0.49. [propagated-inputs]: Remove python-tomli.
2023-04-24gnu: python-eventlet: Skip two failing tests.John Kehayias
* gnu/packages/python-xyz.scm (python-eventlet)[arguments]: In 'check' phase, skip two more tests which are failing with Python 3.10 and have upstream bug reports.
2023-04-24Add mumi config.Arun Isaac
* .mumi/config: New file. * .gitignore: Add .mumi/current-issue.
2023-04-24gnu: mumi: Add bash-minimal to inputs.Arun Isaac
* gnu/packages/mail.scm (mumi)[inputs]: Add bash-minimal.
2023-04-24gnu: mumi: Update to 0.0.5-2.85d5efb.Arun Isaac
* gnu/packages/mail.scm (mumi): Update to 0.0.5-2.85d5efb.
2023-04-24gnu: mumi: Move to Savannah.Arun Isaac
* gnu/packages/mail.scm (source, home-page): Move to Savannah.
2023-04-24gnu: dezyne: Update to 2.17.2.Janneke Nieuwenhuizen
* gnu/packages/dezyne.scm (dezyne): Update to 2.17.2.
2023-04-24gnu: python-shiboken-2: Do not rely on _Py_Mangle being available.Josselin Poiret
* gnu/packages/patches/python-shiboken-2-compat.patch: Fix the patch according to upstream. Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-04-24gnu: openshot: Update to 3.1.0.Andy Tai
* gnu/packages/audio.scm (libopenshot-audio): Update to 0.3.1. * gnu/packages/video.scm (libopenshot): Update to 0.3.1. (openshot): Update to 3.1.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24gnu: eid-mw: Update to 5.1.10.Raphaël Mélotte
* gnu/packages/security-token.scm (eid-mw): Update to 5.1.10 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24gnu: fatrace: Update to 0.17.0.Raphaël Mélotte
* gnu/packages/monitoring.scm (fatrace): Update to 0.17.0 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24gnu: openmpi: Update to 4.1.5.Ludovic Courtès
* gnu/packages/mpi.scm (openmpi): Update to 4.1.5.
2023-04-24read-print: 'pretty-print-with-comments' keeps newlines on long strings.Ludovic Courtès
* guix/read-print.scm (printed-string)[preserve-newlines?]: New procedure. Use it to preserve newlines on long strings. * tests/read-print.scm: Add test.
2023-04-24gnu: python-magic: Update to 0.4.27.Liliana Marie Prikler
* gnu/packages/patches/python-magic-python-bytecode.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. * gnu/packages/python-xyz.scm (python-magic): Update to 0.4.27. [source]<patches>: Remove field. [#:phases]<check>: Do not invoke ‘tests.py’. Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-04-24gnu: openldap-for-linphone: Hide it.Ricardo Wurmus
We don't want this to show up when searching for "openldap". * gnu/packages/openldap.scm (openldap-for-linphone): Wrap in HIDDEN-PACKAGE and add a comment.
2023-04-24gnu: inspekt3d: Adjust to changes in libfive.Ricardo Wurmus
* gnu/packages/engineering.scm (inspekt3d)[arguments]: Use G-expression; patch file to avoid loading removed extension; adjust name of libfive library.
2023-04-24gnu: inspekt3d: Simplify snippet.Ricardo Wurmus
* gnu/packages/engineering.scm (inspekt3d)[source]: Simplify snippet.
2023-04-24gnu: libfive: Update to 0-5.b1ea998.Ricardo Wurmus
* gnu/packages/engineering.scm (libfive): Update to 0-5.b1ea998. [arguments]: Set HOME variable to fix autocompilation; set GUILE_CCACHE_DIR to override default target directory for compiled Guile files; add phases 'fix-library-location and 'install-scm-files.
2023-04-24gnu: python-sure: Update to 2.0.1.John Kehayias
* gnu/packages/python-xyz.scm (python-sure): Update to 2.0.1. [native-inputs]: Add python-rednose.
2023-04-24gnu: python-boltons: Update to 23.0.0.John Kehayias
* gnu/packages/python-xyz.scm (python-boltons): Update to 23.0.0.
2023-04-23gnu: python-pynndescent: Update to 0.5.10.John Kehayias
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.10.
2023-04-23gnu: python-configargparse: Update to 1.5.3.John Kehayias
* gnu/packages/python-xyz.scm (python-configargparse): Update to 1.5.3. [build-system]: Switch to pyproject-build-system. [arguments]: Remove previous 'check' phase. [native-inputs]: Add python-mock and python-pytest, remove python-pyyaml.
2023-04-23gnu: python-scikit-learn: Update to 1.2.2.Leo Famulari
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.2.2.
2023-04-23gnu: python-joblib: Update to 1.1.1.Leo Famulari
* gnu/packages/python-xyz.scm (python-joblib): Update to 1.1.1.
2023-04-23gnu: python-ecdsa: Fix faulty commit.John Kehayias
Fix previous commit, which did not properly add the test to be skipped and repeated the existing skipped test. There is only one new test to be skipped. * gnu/packages/python-crypto.scm (python-ecdsa)[arguments]: In the 'check' phase, properly format the string for skipped tests.
2023-04-23gnu: python-ecdsa: Skip two failing tests.John Kehayias
* gnu/packages/python-crypto.scm (python-ecdsa)[arguments]: In 'check' phase, skip a couple more tests.
2023-04-23gnu: libmediainfo and mediainfo: Update to 23.03.Leo Famulari
* gnu/packages/video.scm (libmediainfo, mediainfo): Update to 23.03.
2023-04-23gnu: libmediainfo and mediainfo: Fix build.Leo Famulari
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Add a shebang to the autogen.sh script in the 'change-to-build-dir' phases.
2023-04-23gnu: eyed3: Update to 0.9.7.Leo Famulari
* gnu/packages/mp3.scm (eyed3): Update to 0.9.7. [propagated-inputs]: Remove python-grako, python-magic, and python-pathlib.
2023-04-23gnu: OpenImageIO: Use the correct source hash.Leo Famulari
This is a followup to commit 5fda088fb17f0f5ad5cbb47314bada5f25afdb68 * gnu/packages/graphics.scm (openimageio)[source]: Fix the hash.
2023-04-23gnu: OpenImageIO: Update to 2.2.21.0.Leo Famulari
This fixes the build with GCC 11. * gnu/packages/graphics.scm (openimageio): Update to 2.2.21.0.
2023-04-23gnu: OpenColorIO: Fix build with GCC 11.Leo Famulari
* gnu/packages/patches/opencolorio-fix-build-with-gcc11.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image-processing.scm (opencolorio)[source]: Use it.
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