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2024-12-03gnu: grep: Fix build for the 64bit Hurd.Janneke Nieuwenhuizen
* gnu/packages/base.scm (grep)[arguments]: When building for the 64bit Hurd, add patch-sigsegv.h stage. Change-Id: I795a591ef8282ee5b760fec43bd4ad849007f602
2024-12-03gnu: elfutils: Fix build for 64bit Hurd.Janneke Nieuwenhuizen
* gnu/packages/elf.scm (elfutils)[arguments]: When building for a 64bit Hurd, set #:make-flags. Change-Id: I00abf360a7de5b1f78c1e912f0dcf27c62c1af68
2024-12-03gnu: bash-minimal: Support [cross-]build with gcc-14.Janneke Nieuwenhuizen
* gnu/packages/bash-minimal.scm (bash)[arguments]: When building for the 64bit hurd, or cross-building, use "CFLAGS=-g -O2 -Wno-implicit-function-declaration". Change-Id: I1356c0aeac303bdf0254c28815716c83884008a0
2024-12-03gnu: cross-libc: Support cross-building for the 64bit Hurd.Janneke Nieuwenhuizen
* gnu/packages/base.scm (glibc)[arguments]: When building for the Hurd, in phase "create-machine-symlink", do not assume CPU is i386, also cater for x86_64. * gnu/packages/cross-base.scm (cross-libc*)[arguments]: Likewise. Change-Id: Ib009b7bd301b543b8629382330cca9d963b7a812
2024-12-03gnu: Add basic support for x86_64-pc-gnu target, aka 64bit Hurd.Janneke Nieuwenhuizen
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Update comment on where to find shared linker name. (make-raw-bag): Also use raw-build-guile3 when building for the 64bit Hurd. * gnu/packages/cross-base.scm (cross-kernel-headers*): Use target-hurd? instead of custom "i586..." matching to also use xhurd-core-headers for target-hurd64. * gnu/packages/make-bootstrap.scm (package-with-relocatable-glibc) [native-inputs]: Move final-inputs before cross-packages. (%binutils-static)[arguments]: When building for the 64bit Hurd, add "lt_cv_prog_compiler_static_works=yes", "lt_cv_prog_compiler_static_works_CXX=yes" to #:make-flags to convince to actually link the binaries statically. (make-guile-static)[arguments]: When building for the 64bit Hurd, add "lt_cv_prog_compiler_static_works=yes" to #:configure-flags to convince libtool to actually link guile statically. * guix/platforms/x86.scm (x86_64-gnu): New exported variable. * guix/utils.scm (target-hurd64? system-hurd64?): New procedures.
2024-12-03gnu: hurd: Update to 0.9.git20240714.Janneke Nieuwenhuizen
* gnu/packages/hurd.scm (hurd-headers): Update to 0.9.git20240714. (hurd)[arguments]: Remove rumpdisk build hack from "prepare-addons" stage. Instead, when cross-compiling, add stage "fixup-cross-configure" to enable rumpdisk. * gnu/system.scm (hurd-multiboot-modules): Remove "--x-xattr-translator-records" option that has been removed and is now the default. Change-Id: I4609b5a959c1ece98e2fe1aedbb1d31d6edadcca
2024-12-03gnu: mig: Update to 1.8+git20231217.Janneke Nieuwenhuizen
* gnu/packages/hurd.scm (mig): Update to 1.8+git20231217. Change-Id: I0e531ecc7fdcfbefe2e0e24d7b2fb5e0fe8a3ae2
2024-12-03gnu: gnumach: Update to v1.8+git20240714.Janneke Nieuwenhuizen
* gnu/packages/patches/gnumach-version.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/hurd.scm (gnumach-headers): Update to v1.8+git20240714 and use it. * gnu/packages/commencement.scm (gnumach-headers-boot0)[origin]: Reset patches. Change-Id: I147c64021c2ee79dfc4cd4fd9a29529eef8890c5
2024-12-03system: Add "installer" sub-command.Janneke Nieuwenhuizen
* guix/scripts/system/installer.scm: New file. * Makefile.am (MODULES)[ENABLE_INSTALLER]: Register it. (MODULES_NOT_COMPILED)[!ENABLE_INSTALLER]: Likewise. * guix/scripts/system.scm (show-help): Add help for "installer" sub-command. (actions): Register "installer". (guix-system): Invoke `guix-system-installer' sub-command. * doc/guix.texi (Invoking guix system): Document it. * gnu/installer.scm (run-installer): Remove "./pre-inst env". Change-Id: I5a05b941c060682c17d45d871df3cf34e3f8643a
2024-12-03gnu: python-falcon: Fix tests.Ricardo Wurmus
* gnu/packages/python-web.scm (python-falcon)[native-inputs]: Add python-orjson. [arguments]: Do not patch test file; respect test-flags in custom 'check phase; provide test-flags to ignore examples and benchmarks. [build-system]: Use pyproject-build-system. Change-Id: Ic173e2d940a2bb9c7f81ea3e70475f8bfff36dfb Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-03gnu: python-fakeredis: Update to 2.26.1.Ricardo Wurmus
* gnu/packages/databases.scm (python-fakeredis): Update to 2.26.1. [arguments]: Do not run slow tests; add phases 'poetry-compatibility and 'start-redis. [propagated-inputs]: Add python-typing-extensions. [native-inputs]: Add redis. Change-Id: I18ed122d9e5307d3d723cfc9ef0d51f120b4ccb5 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-03gnu: python-redis: Update to 5.2.0.Ricardo Wurmus
* gnu/packages/databases.scm (python-redis): Update to 5.2.0. [arguments]: Update list of tests to skip; add phase 'relax-requirements. [native-inputs]: Add python-numpy. Change-Id: I789c511fb4a516e6cdad06dba695af9bb89f562d Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-02gnu: libgit2: Update to 1.8.3.Ashish SHUKLA
* gnu/packages/version-control.scm (libgit2-1.8): Update to 1.8.3. Change-Id: Iff5b1f341a480d06e1f618bc306f0ff0c3a62713 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02gnu: libreoffice: Update to 24.8.3.2.Nicolas Graves
* gnu/packages/libreoffice.scm (libreoffice): Update to 24.8.3.2. [source]<uri>: Add secondary uri. [arguments]<#:phases>: Fix build issue related to issue 43579 in phase 'prepare-src. [configure-flags]: Add optimising flags --disable-cve-tests, --enable-readonly-installset, --disable-dependency-tracking. [native-inputs]: Add gcc-toolchain-12. [inputs]: Add argon2, zxcvbn-c. Change-Id: I72e0ebb4d075c47ea168b181f969a97f9249150a Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02gnu: povray: Fix test run requiring interaction.Ivan Vilata i Balaguer
[[PGP Signed Part:No public key for 3DECC105F5DD2382 created at 2024-10-23T14:00:24+0200 using RSA]] The test render required pressing a key after it was done, which caused the package build to get stuck. Also disable the render display window, which did not cause issues but was pointless. * gnu/packages/graphics.scm (povray)[args]: Patch test render not to pause nor display a window. Change-Id: Ia9527b3a67896972b399464b97dda464365d41ea Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02gnu: freedict-tools: Fix non-determinism of dictzip compressed file headers.Runciter
Reset .dict file mtime to start of the epoch before compressing with dictzip. * gnu/packages/patches/freedict-tools-fix-determinism.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/dictionaries.scm (freedict-tools): Use it. Signed-off-by: Runciter <runciter@whispers-vpn.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02gnu: Add freedict-dictionaries.Runciter
* gnu/packages/dictionaries (freedict-dictionaries): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02gnu: Add freedict-tools.Runciter
* gnu/packages/dictionaries.scm (freedict-tools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I141d30aea0e2c492b272be2ab9359e6b7569f932
2024-12-02gnu: Add dictd.Runciter
* gnu/packages/dictd.scm (dictd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: Id1dbe8c77186574e7ad98ce3f7c8fa14b99b4db4
2024-12-02gnu: Add (gnu packages dictd).Runciter
* gnu/packages/dictd.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I3b68fbbed0a7a44287a6eda6c1e66e068fa17b8f
2024-12-02tests: Adjust ‘guix build -P1’ test to new packages.Ludovic Courtès
Fixes a bug introduced in 794e079437c8687f49d294322dab3b7a8a6abacf whereby the grep patterns used in this test would also match /gnu/store/…-rust-libgit2-sys-0.17.0+1.8.1.drv, thus getting 5 matches instead of 4. * tests/guix-build.sh: Refine grep patterns for ‘guix build -P1’ test. Reported-by: Janneke Nieuwenhuizen <janneke@gnu.org> Change-Id: Iae35e6ee44b8eca0ef66c1d8ab7f9ff65a59d8d0
2024-12-02gnu: homer: Install config.txt.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (homer)[native-inputs]: Add config.txt. [arguments]: Update 'configure phase to place config.txt in expected location; patch configuration code to optionally load a user's configuration file. Change-Id: Ib05c828e751c6568524bbef45997a42fade4545a
2024-12-02gnu: homer: Install homer executable.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (homer)[arguments]: Update 'install phase to also install "homer" to the bin directory. Change-Id: Ia2d23fce493f9c10cc43ac126cd83956b4b9bb05
2024-12-02Merge remote-tracking branch 'origin/rust-team'Efraim Flashner
Change-Id: I6d5c28252f060eeb69eb02fd281e7268bb885b29
2024-12-02gnu: zstd: Fix cross-building to mingw32.Efraim Flashner
* gnu/packages/compression.scm (zstd)[arguments]: Adjust the custom 'adjust-library-locations phase to have separate logic for targeting mingw32. Adjust the make-flags to add some extra flags when targeting mingw32. Change-Id: Ifd32a6bd9157af93c7338dacc96467e2756b9314
2024-12-02gnu: redis: Add comment about upcoming license change.Efraim Flashner
* gnu/packages/databases.scm (redis): Add a note with the package to be aware of the upcoming non-free license change. Change-Id: I60ef9bce81b6650d88f567e98c5bcf543a13082e
2024-12-02packages: 'package-input-rewriting/spec' optionally replace hidden.Greg Hogan
Commit eee95b5a879b7096dffd533f24107cf8926b621e changed package rewriting to ignore hidden packages. This patch permits the previous use by adding an option to rewrite hidden packages. * guix/packages.scm (package-input-rewriting/spec)[rewrite]: When P is hidden, return it as-is unless #:replace-hidden? has been enabled. * tests/packages.scm ("package-input-rewriting/spec, replace hidden package"): New test. * doc/guix.texi (Defining Package Variants): Update. Change-Id: I0a7988cac70e0c6b88b0fe6e27c1036fa723e030 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02pack: Add ‘--file=FILE’ with the same meaning as for ‘guix build’.Arne Babenhauserheide
* guix/scripts/pack.scm (%options): add --file=FILE, but no shorthand (that’s already taken for format). * doc/guix.texi (Invoking guix pack): Document it. Change-Id: I87797fccdf218ead3b7f471a84034e8a8d566245 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-12-02maint: Run ‘etc/upgrade-manifest.scm’ in a UTF-8 locale.Ludovic Courtès
* etc/upgrade-manifest.scm: Add calls to ‘setlocale’ to force a UTF-8 locale. Change-Id: Ia567a1e08124d9eab7fb32f3363681a8f37431b1
2024-12-02gnu: python-pairtools: Update to 1.1.0-fix.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pairtools): Update to 1.1.0-fix. [build-system]: Use pyproject-build-system. [arguments]: Add phase 'patch-setup.py. [native-inputs]: Add python-pytest-cov, python-setuptools, and python-wheel. Change-Id: Ifa3c12de228420d8fdd7b0053bb9da80b9b3efe4
2024-12-02gnu: Add macs-3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (macs-3): New variable. Change-Id: I4bc417e90a1e9d6d28226ea4f66ddc035826c2c4
2024-12-02gnu: python-hmmlearn: Update to 0.3.3.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-hmmlearn): Update to 0.3.3. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase; add phases 'set-core-count and 'build-extensions. [propagated-inputs]: Remove pybind11 and python-setuptools-scm. [native-inputs]: Add pybind11, python-setuptools-scm, and util-linux. [properties]: Add hints for the updater. Change-Id: I1acb69c74ae9c4a508fe28cdaf834d258e7778ff
2024-12-02import/crate: Fix typo.Ricardo Wurmus
guix/import/crate.scm (lookup-crate): Fix typo in docstring. Change-Id: I5492387b93b27ab42999d5984fa7f02e8bee11e2
2024-12-02gnu: Add python-cykhash.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-cykhash): New variable. Change-Id: I7f46da1f53b10957c102ca21e74f144955676730
2024-12-02gnu: emacs-gnosis: Update to 0.4.8.Thanos Apollo
* gnu/packages/emacs-xyz.scm (emacs-gnosis): Update to 0.4.8. [home-page]: Add ending slash. [synopsis]: Remove ending period. [description]: Use two spaces after sentence. Change-Id: Ie80016fc190e66695b7a8ea8e3fded7854ebc872 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-02gnu: librewolf: Update to 133.0-1 [security fixes].Ian Eure
New upstream version. Fixes CVEs: CVE-2024-11691: Out-of-bounds write in Apple GPU drivers via WebGL CVE-2024-11700: Potential Tapjacking Exploit for Intent Confirmation on Android CVE-2024-11692: Select list elements could be shown over another site CVE-2024-11701: Misleading Address Bar State During Navigation Interruption CVE-2024-11702: Inadequate Clipboard Protection in Private Browsing Mode on Android CVE-2024-11693: Download Protections were bypassed by .library-ms files on Windows CVE-2024-11694: CSP Bypass and XSS Exposure via Web Compatibility Shims CVE-2024-11695: URL Bar Spoofing via Manipulated Punycode and Whitespace Characters CVE-2024-11703: Password access without authentication via PIN bypass on Android CVE-2024-11696: Unhandled Exception in Add-on Signature Verification CVE-2024-11697: Improper Keypress Handling in Executable File Confirmation Dialog CVE-2024-11704: Potential Double-Free Vulnerability in PKCS#7 Decryption Handling CVE-2024-11698: Fullscreen Lock-Up When Modal Dialog Interrupts Transition on macOS CVE-2024-11705: Null Pointer Dereference in NSC_DeriveKey CVE-2024-11706: Null Pointer Dereference in PKCS#12 Utility CVE-2024-11708: Data race with PlaybackParams CVE-2024-11699: Memory safety bugs fixed in Firefox 133, Firefox ESR 128.5, and Thunderbird 128.5 * gnu/packages/librewolf.scm (librewolf): Update to 133.0-1. Change-Id: I611505daf4d4f0940405190471f443d99102c2b9 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-02gnu: nss-rapid: Update to 3.107.Ian Eure
* gnu/packages/nss.scm (nss-rapid): Update to 3.107. Change-Id: I05c6e9c6633ed222d26b76ae5def35179f31f317 Signed-off-by: Hilton Chain <hako@ultrarare.space>
2024-12-02gnu: redis: Update to 7.2.6.Hilton Chain
* gnu/packages/databases.scm (redis): Update to 7.2.6. [arguments]<#:phases>: Update failing tests. Change-Id: Ife107541697fda4f0928497560871f8ffb07d445
2024-12-01etc: Add upgrade manifest.Ludovic Courtès
* guix/scripts/build.scm (dependents): Export. * etc/upgrade-manifest.scm: New file. * Makefile.am (EXTRA_DIST): Add it. Change-Id: I1b2a2ebd09e559c68da9f25772bf33caacb4c031
2024-12-01transformations: Add #:authenticate? to ‘package-with-upstream-version’.Ludovic Courtès
* guix/transformations.scm (upstream-source-without-signatures): New procedures. (package-with-upstream-version): Add #:authenticate? and honor it. Change-Id: Ib86feb765f57bc1b129e813780abc605c43ed97b
2024-12-01transformations: ‘package-with-upstream-version’ can preserve patches.Ludovic Courtès
* guix/transformations.scm (upstream-fetch): New procedure. (package-with-upstream-version): Add #:preserve-patches? and honor it. Change-Id: Ib56b84957d8bdad2eebe2551e2a6e477506fc55e
2024-12-01guix build: Validate that the file passed to ‘-m’ returns a manifest.Ludovic Courtès
* guix/scripts/build.scm (options->things-to-build)[ensure-manifest]: New procedure. Use it. Change-Id: If64c483d7079f441a296d5bd4e06e67f44cbb7bf
2024-12-01gnu-maintenance: ‘generic-html’ update honors <base href="…">.Ludovic Courtès
This fixes updates of ‘curl’: <https://curl.se/download/> includes <base href="…"> in its head and ignoring it would lead to incorrect download URLs. * guix/gnu-maintenance.scm (html-links): Keep track of <base href="…"> in ‘loop’. Rewrite relative links at the end. Change-Id: I989da78df3431034c9a584f8e10cad87ae6dc920
2024-12-01gnu: git-minimal: Add ‘upstream-name’ property.Ludovic Courtès
* gnu/packages/version-control.scm (git-minimal)[properties]: Add ‘upstream-name’. Change-Id: I2d2516003b7f686852a3531859d06ca7f4e4820d
2024-12-01gnu: gnutls: Change release monitoring URL.Ludovic Courtès
* gnu/packages/tls.scm (gnutls)[properties]: Change release monitoring URL. Add ‘upstream-name’. Change-Id: If6ee941246b130914ddf7ca11c074a9547b9d739
2024-12-01gnu: Update updater properties for GnuPG-related packages.Ludovic Courtès
* gnu/packages/gnupg.scm (libgpg-error)[properties]: Remove. (libgcrypt)[properties]: Remove. (libassuan)[properties]: Remove. (libksba)[properties]: Remove. (npth)[properties]: Remove. (gnupg)[properties]: Remove. (gpgme)[properties]: Remove. (pinentry-tty)[properties]: Change for ‘generic-html’. (gpa)[properties]: Remove. Change-Id: I1eb9d6ad5bb3ecbfbef3d44dbae281a3de7ebac7
2024-12-01gnu-maintenance: ‘gnu-ftp’ updater excludes GnuPG-hosted packages.Ludovic Courtès
Since ftp://ftp.gnupg.org no longer exists, another updater should be used for packages with code fetched from mirror://gnupg. * guix/gnu-maintenance.scm (gnupg-hosted?): New procedure. (%gnu-ftp-updater): Exclude packages that match ‘gnupg-hosted?’. * guix/download.scm (%mirrors): Remove ftp://ftp.gnupg.org. Change-Id: I653877ad843da60281d3a234acc85743bee64856
2024-12-01import: gnome: Keep going upon HTTP errors.Ludovic Courtès
* guix/import/gnome.scm (import-gnome-release): Do not re-raise condition C, emit a warning instead. Change-Id: I9a7c337a17d1f7ed4677398e7b0f383befca7d74
2024-12-01guix build: Add ‘--dependents’.Ludovic Courtès
* guix/scripts/build.scm (show-help, %options): Add ‘--dependents’. (dependents): New procedure. (options->things-to-build): Add ‘store’ parameter; honor ‘dependents’ option. [for-type]: Handle ‘dependents’ type. (options->derivations): Update call to ‘options->things-to-build’. * tests/guix-build.sh: Add test. * doc/guix.texi (Additional Build Options): Document ‘--dependents’. (Invoking guix refresh): Cross-reference it. * doc/contributing.texi (Submitting Patches): Mention it. Change-Id: I00b6d5831e1f1d35dc8b84a82605391d5a8f417c
2024-12-01packages: Factorize ‘all-packages’.Ludovic Courtès
* gnu/packages.scm (all-packages): New procedure. * etc/source-manifest.scm (all-packages): Remove. * guix/scripts/graph.scm (all-packages): Remove. * guix/scripts/refresh.scm (all-packages): Remove. * guix/scripts/weather.scm (all-packages): Remove. Change-Id: I6072952c4b877b541037ce86402cfb7744eeb0a0