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2024-12-01gnu: git-minimal: Add ‘upstream-name’ property....* gnu/packages/version-control.scm (git-minimal)[properties]: Add ‘upstream-name’. Change-Id: I2d2516003b7f686852a3531859d06ca7f4e4820d Ludovic Courtès
2024-12-01gnu: gnutls: Change release monitoring URL....* gnu/packages/tls.scm (gnutls)[properties]: Change release monitoring URL. Add ‘upstream-name’. Change-Id: If6ee941246b130914ddf7ca11c074a9547b9d739 Ludovic Courtès
2024-12-01gnu: Update updater properties for GnuPG-related packages....* gnu/packages/gnupg.scm (libgpg-error)[properties]: Remove. (libgcrypt)[properties]: Remove. (libassuan)[properties]: Remove. (libksba)[properties]: Remove. (npth)[properties]: Remove. (gnupg)[properties]: Remove. (gpgme)[properties]: Remove. (pinentry-tty)[properties]: Change for ‘generic-html’. (gpa)[properties]: Remove. Change-Id: I1eb9d6ad5bb3ecbfbef3d44dbae281a3de7ebac7 Ludovic Courtès
2024-12-01packages: Factorize ‘all-packages’....* gnu/packages.scm (all-packages): New procedure. * etc/source-manifest.scm (all-packages): Remove. * guix/scripts/graph.scm (all-packages): Remove. * guix/scripts/refresh.scm (all-packages): Remove. * guix/scripts/weather.scm (all-packages): Remove. Change-Id: I6072952c4b877b541037ce86402cfb7744eeb0a0 Ludovic Courtès
2024-12-01gnu: ucx: Enable building on riscv64-linux....* gnu/packages/fabric-management.scm (ucx)[supported-systems]: Add riscv64-linux. Change-Id: I84d506c3ebfd8d4d237a6545ba125f4a037fa821 Efraim Flashner
2024-12-01gnu: ucx: Fix building on powerpc64le-linux....* gnu/packages/fabric-management.scm (ucx)[source]: Add snippet to add missing include file. Change-Id: I65a0d6e57a2728013030f3f344305744fa913390 Efraim Flashner
2024-12-01bootloader: u-boot: Add procedure to share installer code....* gnu/bootloader/u-boot.scm (make-u-boot-installer): Add procedure. (install-u-boot-ts7970-q-2g-1000mhz-c-u-boot, install-qemu-riscv64-u-boot): Remove variables. (install-starfive-visionfive2-uEnv.txt, u-boot-ts7970-q-2g-1000mhz-c-bootloader, u-boot-qemu-riscv64-bootloader): Use make-u-boot-installer. Change-Id: I0b0b507925a7c8ca608f7307d442d9588862ae91 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Herman Rimm
2024-12-01bootloader: grub: Add procedure to share EFI installer code....* gnu/bootloader/grub.scm (make-grub-efi-bootloader): Add procedure. (install-grub-efi, install-grub-efi32): Remove variables. (install-grub-efi-removable): Deprecate variable. Change-Id: Ie10b506bb1088179d459ddafe3229fd730ac45aa Signed-off-by: Ludovic Courtès <ludo@gnu.org> Herman Rimm
2024-12-01gnu: openmpi@5: Update to 5.0.6....* gnu/packages/mpi.scm (openmpi-5): Update to 5.0.6. Change-Id: I1aed5f0e76d64a215c4a13f445628ec206e31acf Ludovic Courtès
2024-12-01gnu: rdma-core: Update to 54.0....* gnu/packages/linux.scm (rdma-core): Update to 54.0. Change-Id: I7f10ec57a1cad585abb08bdc30bd9e2aaafe7624 Ludovic Courtès
2024-12-01gnu: ucx: Update to 1.17.0....* gnu/packages/fabric-management.scm (ucx): Update to 1.17.0. * gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Rebase. Change-Id: I2089de93da88f4f81c4b233eb03abae1f41dfe7f Ludovic Courtès
2024-12-01Revert "gnu: ucx: Update to 1.17.0."...This reverts commit 7c36577cdec8185ea7df608eb9a68424e19ee9cb, which broke unit tests running in the chroot build environment. For instance, tests of ‘hdf5-parallel-openmpi’ would fail with: Testing ../../src/h5diff/ph5diff -c 1_vds.h5 2_vds.h5 *FAILED* ====Expected result (expect_sorted) differs from actual result (actual_sorted) *** expect_sorted 2024-12-01 16:41:03.795879595 +0000 --- actual_sorted 2024-12-01 16:41:03.791879542 +0000 *************** *** 1,3 **** --- 1,15 ---- Not comparable: </vds_dset> has rank 3, dimensions [5x18x8], max dimensions [18446744073709551615x18x8] Warning: </vds_dset> or </vds_dset> is a virtual dataset + [1733071262.437780] [localhost:33263:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory + [1733071262.468994] [localhost:33247:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory + [1733071262.479911] [localhost:33242:0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory Change-Id: I9c08d3c5375a2abd7d78344dfbef9b407828d1e0 Ludovic Courtès
2024-12-01gnu: icedove: Update to 115.16.3....* gnu/packages/gnuzilla.scm (icedove): Update to 115.16.3. Change-Id: I076e670a5442a910ac6d5aeb7ed8f64236442062 Jonathan Brielmaier
2024-12-01gnu: openmpi-5: Don't force building with ucx....* gnu/packages/mpi.scm (openmpi-5)[inputs]: Use inherited inputs to only add ucx when it is supported. [arguments]: Only add configure-flag for ucx when it is included as an input. Change-Id: I4a5fc86999ffbafdb99bd68c170fc7a1fa6a33a5 Efraim Flashner
2024-12-01gnu: ucx: Update to 1.17.0....* gnu/packages/mpi.scm (ucx): Update to 1.17.0. [source]: Remove patch. Add snippet to add missing header. [supported-systems]: Add riscv64-linux. * gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Change-Id: I56db18f32ec0baa8439a31a1781763f318e8726e Efraim Flashner
2024-12-01gnu: libfabric: Check for transitive supported packages....* gnu/packages/linux.scm (libfabric)[inputs]: Adjust if-supported function to check the package-transitive-supported-systems. Change-Id: I47d14b08906753d20f6f2a7ab4068a9e84319350 Efraim Flashner
2024-12-01gnu: cassini-headers: Limit supported systems....* gnu/packages/linux.scm (cassini-headers)[supported-systems]: New field. Change-Id: I44efa95de527099774abb57da78410c627fdc968 Efraim Flashner
2024-12-01gnu: Add scenefx....* gnu/packages/wm.scm (scenefx): New variable. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Change-Id: Ia91747cbec59226a83a020b5fedbfd99886c35df Josep Bigorra
2024-12-01gnu: cataclysm-dda: Update to 0-H....* gnu/packages/games.scm (cataclysm-dda): Update to 0.H. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Change-Id: I8f3776b1bbb4ead2d409b2e1a3c4c98537126f12 Lynn Leichtle
2024-12-01gnu: plasma-nm: Add missing inputs....* gnu/packages/kde-plasma.scm (plasma-nm)[inputs]: Add mobile-broadband-provider-info. [arguments]: Stop replace 'check phase. Change-Id: I82b220694e26b48f190c1c5d6609da39e955cc30 Zheng Junjie
2024-12-01gnu: geoclue: Update to 2.7.2....* gnu/packages/gnome.scm (geoclue): Update to 2.7.2. * gnu/packages/patches/geoclue-config.patch: Adjust. Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> Sergey Trofimov
2024-12-01gnu: gimp-next: Update to 3.0.0-RC1....* gnu/packages/gimp.scm (gimp-next): Update to 3.0.0-RC1. [inputs]: Add python-pygobject. Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Liliana Marie Prikler
2024-12-01gnu: gegl: Update to 0.4.50....* gnu/packages/gimp.scm (gegl): Update to 0.4.50. Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Liliana Marie Prikler
2024-12-01gnu: babl: Update to 0.1.110....* gnu/packages/gimp.scm (babl): Update to 0.1.110. Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Liliana Marie Prikler
2024-12-01gnu: r-voltron: Add Python inputs....* gnu/packages/bioinformatics.scm (r-voltron)[inputs]: Add python, python-numpy, python-pandas, python-anndata, python-h5py, python-natsort, python-numcodecs, python-packaging, python-scipy, python-tifffile, and python-zarr. Change-Id: Iab137936550b51d6839d9beaa47f6102a8f3c355 Ricardo Wurmus
2024-12-01gnu: r-voltron: Update to 0.2.0-1.9f9415c....* gnu/packages/bioinformatics.scm (r-voltron): Update to 0.2.0-1.9f9415c. [inputs]: Remove tbb. [propagated-inputs]: Remove r-anndata, r-fastdummies, r-fnn, r-ggforce, r-hdf5r, r-htmltools, r-interp, r-morpho, r-raster, r-s4vectors, r-scales, r-terra, r-umap, and r-xml; add r-basilisk, r-ids, r-rann, r-rcdt, r-rcppannoy, r-rcpparmadillo, r-reticulate, r-s4arrays, and r-sp. [native-inputs]: Add r-testthat. [description]: Update. Change-Id: I8051ade560e03f8e3760560ec7b78d9941c00e08 Ricardo Wurmus
2024-12-01gnu: Add r-rcdt....* gnu/packages/cran.scm (r-rcdt): New variable. Change-Id: I83b00c95f2c3c6f82e9e9cf8f173ba087e1c29e0 Ricardo Wurmus
2024-12-01gnu: Add r-colorsgen....* gnu/packages/cran.scm (r-colorsgen): New variable. Change-Id: I1acb2b0dd2661a5abdb59451522da6dffa85f470 Ricardo Wurmus
2024-12-01gnu: imppg: Disable tests on non x86_64 architectures....Tests regretion after update to the latest version as seen in CI log <https://ci.guix.gnu.org/build/6720267/log/raw>. * gnu/packages/astronomy.scm (imppg) [arguments]<test-flags>: Silent tests on non x86_64 architectures, report upstream as well. Change-Id: I875350ac60dc2f6a72eb1216a614d8943d41f9ed Sharlatan Hellseher
2024-12-01gnu: weechat: Switch to git source....* gnu/packages/irc.scm (weechat)[source]: Use git-fetch. Change-Id: I031d494db1b7c273bc87d0bdb21ee51c2c3ae10b Zheng Junjie
2024-12-01gnu: weechat: Improve style....* gnu/packages/irc.scm (weechat)[native-inputs]: Remove label. [arguments]: Use G-expressions. Change-Id: I08e2f4135760e61acbae915f045fb3838d965b25 Zheng Junjie
2024-12-01gnu: weechat: Update to 4.4.4....* gnu/packages/irc.scm (weechat): Update to 4.4.4. Change-Id: I08c120df160c3ff7095f2418fe9f9553df3abe3c Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Ashish SHUKLA
2024-12-01gnu: lftp: Use G-expressions....* gnu/packages/ftp.scm (lftp)[arguments]: Use G-expressions. Change-Id: I504465e7604d9638442b063753a8cf8abf3616a9 Zheng Junjie
2024-12-01gnu: lftp: Update to 4.9.3....The updated information is sourced from the upstream repository at GitHub: https://github.com/lavv17/lftp * gnu/packages/ftp.scm (lftp): Update to 4.9.3. [source]<origin>: Switch to git upstream. [native-inputs]: Add autoconf, automake, gettext-minimal, bison, gnulib, gperf, and libtool. [arguments]<#:phases>: Add unpack-gnulib phase. Delete existing bootstrap phase. Add new bootstrap phase to invoke it after patch-source-shebangs. [home-page]: Update it. Change-Id: I73771ed7e577da4bc82a8e74550eca83413dc8de Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Ashish SHUKLA
2024-12-01gnu: b4: Fix git binary access....* gnu/packages/version-control.scm (b4)[arguments]<#:phases>: Fix phase 'hardcode-git-bin. Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn> Nicolas Graves
2024-12-01gnu: wget2: Use G-expressions....* gnu/packages/wget.scm (wget2): Use G-expressions. Change-Id: I8fbb5bab0746c5c98d2513fb31936ba56a8b7049 Zheng Junjie
2024-12-01gnu: pigx-scrnaseq: Update to 1.1.10....* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.10. [arguments]: Remove quasiquote. Change-Id: I6cab358addfb376a878929bfb5041edc00cd336a Ricardo Wurmus
2024-12-01gnu: pigx-bsseq: Update to 0.1.10....* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.10. [native-inputs]: Use tzdata-for-tests instead of tzdata. [arguments]: Remove quasiquote. Change-Id: I680b08cda788fc03a8bedb87f241116a051798d6 Ricardo Wurmus
2024-12-01gnu: Add go-jqp....* gnu/packages/golang-xyz.scm (go-jqp): New variable. Change-Id: I736e039a456960e0e5864d7d197b2a6a823bbe58 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: go-github-com-charmbracelet-bubbletea: Update to 1.2.3....* gnu/packages/golang.scm (go-github-com-charmbracelet-bubbletea): Update to 1.2.3. [propagated-inputs]: Add go-github-com-muesli-ansi, go-github-com-muesli-cancelreader, go-github-com-charmbracelet-lipgloss, go-github-com-charmbracelet-x-term, go-github-com-charmbracelet-x-ansi, and go-golang-org-x-sync. Sort inputs alphabetically. [arguments] <phases>: Fix tests that are failing due to newer version of "go-github-com-charmbracelet-x-ansi" package. Change-Id: Ifdb3074f342b34c07c0e7ab47341b159d1eea0c2 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: gojq: Adjust import and unpack paths....* gnu/packages/web.scm (gojq) [arguments]<import-path>: Provide path to the command source. <unpack-path>: Set to "github.com/itchyny/gojq". Change-Id: I6a4d0cbdba385460d7ab43d62fe1897922a7c7e9 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: go-github-com-itchyny-gojq: Install the library....* gnu/packages/web.scm (go-github-com-itchyny-gojq): Install the library files instead of "gojq" binary. [arguments]: Remove <unpack-path>, adjust <import-path>. Change-Id: I72235e0cfeee81b0e7490ebd9d92d0d36ceb1844 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-muesli-ansi....* gnu/packages/golang-xyz.scm (go-github-com-muesli-ansi): New variable. Change-Id: I3dbbd8af04373997fcb3c60872dff14ab1b2b76a Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-charmbracelet-bubbles....* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-bubbles): New variable. Change-Id: I090db91509590ca9a8cab1a209d00bcc12b524e7 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-charmbracelet-lipgloss....* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-lipgloss): New variable. Change-Id: I73050c96830025ed63be7567873f8faf7573453d Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-charmbracelet-x-term....* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-term): New variable. Change-Id: I854febc3a3010f39051ee6fbd4a159993043d41e Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-charmbracelet-x-exp-golden....* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-exp-golden): New variable. Change-Id: I7fa815433d9a83e4562bdc769312dd05e0a298da Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-charmbracelet-x-ansi....* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-ansi): New variable. Change-Id: I1451ae9953bc87475413b83bb636a2df14ddc70c Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-sahilm-fuzzy....* gnu/packages/golang-xyz.scm (go-github-com-sahilm-fuzzy): New variable. Change-Id: Iebf4f8c3848e1e08b2860ac69a5a8d816ac260df Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-12-01gnu: Add go-github-com-kylelemons-godebug-pretty....* gnu/packages/golang.scm (go-github-com-kylelemons-godebug-pretty): New variable. Change-Id: Icd7d5fd70cf56d1ca74e9a2cfb929a3344128ba7 Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov