| Age | Commit message (Expand) | Author |
|---|
| 2023-10-17 | gnu: python-trimesh: Update to 3.23.5....* gnu/packages/python-science.scm (python-trimesh): Update to 3.23.5.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience |
| 2023-10-17 | gnu: python-pyvista: Update to 0.42.3....* gnu/packages/python-science.scm (python-pyvista): Update to 0.42.3.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience |
| 2023-10-08 | gnu: python-distributed: Disable failing tests....* gnu/packages/python-science.scm (python-distributed): Disable failing tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Nicolas Graves |
| 2023-09-30 | gnu: Add python-numpoly....* gnu/packages/python-science.scm (python-numpoly): New variable.
| Vinicius Monego |
| 2023-08-05 | gnu: python-pytensor: Update to 2.14.2....* gnu/packages/python-science.scm (python-pytensor): Update to 2.14.2.
[native-inputs]: Add python-pytest-mock.
| Vinicius Monego |
| 2023-07-29 | gnu: Add python-scikit-fem....* gnu/packages/python-science.scm (python-scikit-fem): New variable.
| Vinicius Monego |
| 2023-07-15 | gnu: python-distributed: Update to 2023.7.0....* gnu/packages/python-science.scm (python-distributed): Update to 2023.7.0.
| Ricardo Wurmus |
| 2023-07-13 | gnu: Add python-plotnine....* gnu/packages/python-science.scm (python-plotnine): New variable.
| Ricardo Wurmus |
| 2023-06-29 | gnu: python-pandas-flavor: Update to 0.5.0....* gnu/packages/python-science.scm (python-pandas-flavor): Update to 0.5.0.
[propagated-inputs]: Add python-lazy-loader and python-packaging.
[home-page]: Update.
| Arun Isaac |
| 2023-06-29 | gnu: python-distributed: Disable timeout test....* gnu/packages/python-science.scm (python-distributed)[arguments]: Disable
test_nanny_timeout, because it times out.
| Ricardo Wurmus |
| 2023-06-25 | gnu: python-trimesh: Update to 3.22.1....* gnu/packages/python-science.scm (python-trimesh): Update to 3.22.1.
[arguments]<#:phases>: Update path in 'fix-build' phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
| 2023-06-25 | gnu: Add python-pytensor....* gnu/packages/python-science.scm (python-pytensor): New variable.
| Vinicius Monego |
| 2023-06-25 | gnu: Add python-xarray-einstats....* gnu/packages/python-science.scm (python-xarray-einstats): New variable.
| Vinicius Monego |
| 2023-06-25 | gnu: python-xarray: Update to 2023.6.0....* gnu/packages/python-science.scm (python-xarray): Update to 2023.6.0.
[build-system]: Switch to pyproject-build-system.
[arguments]: Do not override the check phase.
| Vinicius Monego |
| 2023-06-25 | gnu: Add python-einops....* gnu/packages/python-science.scm (python-einops): New variable.
| Vinicius Monego |
| 2023-06-20 | gnu: python-pyvista: Update to 0.39.1....* gnu/packages/python-science.scm (python-pyvista): Update to 0.39.1.
[propagated-inputs]: Add python-pooch, remove python-appdirs.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience |
| 2023-05-11 | gnu: python-distributed: Update to 2023.4.1....* gnu/packages/python-science.scm (python-distributed): Update to 2023.4.1.
[source]: Remove snippet.
[arguments]: Update build phase 'versioneer; restore 'sanity-check phase;
simplify custom 'check phase; add 'fix-pytest-config phase; use #:test-flags.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-importlib-metadata.
| Ricardo Wurmus |
| 2023-05-10 | gnu: python-scikit-optimize: Fix build with newer numpy and sklearn....* gnu/packages/patches/python-scikit-optimize-1148.patch,
gnu/packages/patches/python-scikit-optimize-1150.patch: New patches.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/python-science.scm (python-scikit-optimize)[source]: Fetch with
git and apply patches.
| Ricardo Wurmus |
| 2023-05-08 | gnu: python-bottleneck: Honor #:tests? flag....* gnu/packages/python-science.scm (python-bottleneck)[arguments]: Adjust
custom 'check phase to honor the #:tests? flag.
| Efraim Flashner |
| 2023-05-08 | gnu: python-bottleneck: Update to 1.3.7....* gnu/packages/python-science.scm (python-bottleneck): Update to 1.3.7.
| Efraim Flashner |
| 2023-04-26 | gnu: python-distributed: Fix build....* gnu/packages/python-science.scm (python-distributed)[build-system]: Use
pyproject-build-system.
[arguments]: Hide deprecation warnings from tornado, because they break almost
all tests; disable three more tests.
| Ricardo Wurmus |
| 2023-04-14 | Merge branch 'master' into core-updates....Conflicts:
gnu/local.mk
gnu/packages/build-tools.scm
gnu/packages/certs.scm
gnu/packages/check.scm
gnu/packages/compression.scm
gnu/packages/cups.scm
gnu/packages/fontutils.scm
gnu/packages/gnuzilla.scm
gnu/packages/guile.scm
gnu/packages/ibus.scm
gnu/packages/image-processing.scm
gnu/packages/linux.scm
gnu/packages/music.scm
gnu/packages/nss.scm
gnu/packages/pdf.scm
gnu/packages/python-xyz.scm
gnu/packages/qt.scm
gnu/packages/ruby.scm
gnu/packages/shells.scm
gnu/packages/tex.scm
gnu/packages/video.scm
gnu/packages/vulkan.scm
gnu/packages/web.scm
gnu/packages/webkit.scm
gnu/packages/wm.scm
| Maxim Cournoyer |
| 2023-04-11 | gnu: python-scipy: Update to 1.10.1....* gnu/packages/python-science.scm (python-scipy): Update to 1.10.1.
[build-system]: Use pyproject-build-system.
[arguments]: Add #:build-backend argument.
Remove loosen-requirements, build and install phases.
[native-inputs]: Remove python-pypa-build.
| Maxim Cournoyer |
| 2023-03-24 | gnu: python-scikit-allel: Use pyproject-build-system....* gnu/packages/python-science.scm (python-scikit-allel): Move up to create
alphabetic order.
[build-system]: Use pyproject-build-system.
[arguments]: Provide test flags instead of overriding 'check phase; split out
build step into new 'build-ext phase. Disable roh_mhmm tests.
| Ricardo Wurmus |
| 2023-03-24 | gnu: Add python-scikit-optimize....* gnu/packages/python-science.scm (python-scikit-optimize): New variable.
| Ricardo Wurmus |
| 2023-03-21 | gnu: Add python-libneuroml....* gnu/packages/python-science.scm (python-libneuroml): New variable.
| Lars-Dominik Braun |
| 2023-03-21 | gnu: Add python-pylems....* gnu/packages/python-science.scm (python-pylems): New variable.
| Lars-Dominik Braun |
| 2023-01-08 | gnu: Add python-pydicom....* gnu/packages/python-science.scm (python-pydicom): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Antero Mejr |
| 2022-12-05 | gnu: python-sgp4: Move to astronomy....* gnu/packages/astronomy.scm: (python-sgp4): Move here from python-science.scm.
[description]: Expand description, annotate acronyms, add link to CelesTrak.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Sharlatan Hellseher |
| 2022-12-05 | gnu: python-sgp4: Update to 2.21....The latest version passes build on aarch64-linux system.
* gnu/packages/python-science.scm (python-sgp4): Update to 2.21.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Sharlatan Hellseher |
| 2022-12-02 | gnu: python-msgpack-numpy: Update to 0.4.8....* gnu/packages/python-science.scm (python-msgpack-numpy): Update to 0.4.8.
| Navid Afkhami |
| 2022-11-11 | gnu: Add python-tspex....* gnu/packages/python-science.scm (python-tspex): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| Navid Afkhami |
| 2022-11-04 | gnu: Add python-pyts....* gnu/packages/python-science.scm (python-pyts): New variable.
| Ricardo Wurmus |
| 2022-10-18 | gnu: Add python-simple-pid....* gnu/packages/python-science.scm (python-simple-pid): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| jgart |
| 2022-09-29 | Merge branch 'master' into staging | Marius Bakke |
| 2022-09-28 | gnu: Add python-simplespectral....* gnu/packages/python-science.scm (python-simplespectral): New variable.
| Guillaume Le Vaillant |
| 2022-09-27 | Merge branch 'master' into staging....With resolved conflicts in:
gnu/local.mk
gnu/packages/crates-io.scm
| Maxim Cournoyer |
| 2022-09-25 | gnu: Add python-vaex-core....* gnu/packages/python-science.scm (python-vaex-core): New variable.
| Ricardo Wurmus |
| 2022-09-18 | gnu: python-cython: Remove duplicate version....* gnu/packages/python-xyz.scm (python-cython-0.29.32): Remove variable.
* gnu/packages/python-science.scm (python-pandas)[native-inputs]: Change from
PYTHON-CYTHON-0.29.32 to PYTHON-CYTHON.
| Marius Bakke |
| 2022-09-18 | gnu: python-pandas: Update to 1.4.4....* gnu/packages/python-science.scm (python-pandas): Update to 1.4.4.
[native-inputs]: Change from PYTHON-CYTHON to PYTHON-CYTHON-0.29.32.
| Marius Bakke |
| 2022-09-16 | gnu: python-scipy: Update to 1.9.1....* gnu/packages/python-science.scm (python-scipy): Update to 1.9.1.
[source]: Switch to GIT-FETCH.
[outputs]: Remove.
[arguments]: Don't disable Pythran. Don't configure OpenBLAS which is now
discovered by pkg-config. Do a "manual" PEP 517 style build. Make
install-doc phase conditional on the presence of Sphinx. Simplify tests.
[propagated-inputs]: Add PYTHON-PYTHRAN.
[native-inputs]: Remove PERL, WHICH, PYTHON-NUMPYDOC,
PYTHON-PYDATA-SPHINX-THEME, PYTHON-SPHINX, and PYTHON-SPHINX-PANELS. Add
GCC, PKG-CONFIG, PYTHON-PYPA-BUILD and PYTHON-MESON.
| Marius Bakke |
| 2022-09-14 | gnu: python-pingouin: Don't pin scikit-learn version....* gnu/packages/python-science.scm (python-pingouin)[arguments]: Add phase.
| Marius Bakke |
| 2022-09-11 | gnu: python-pingouin: Update to 0.5.2....* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.2.
[arguments]: Adjust outdated substitution.
| Marius Bakke |
| 2022-09-10 | gnu: Add comments to the bottom of a few package modules....This will hopefully discourage patches which add new packages to the bottom of
files, as this increases the likelihood of conflicts when applying patches.
If there are more specific ways that packages should be arranged in specific
modules, this message can be updated accordingly.
* gnu/packages/bioconductor.scm: Add comment discouraging adding packages to
the bottom of the file.
* gnu/packages/bioinformatics.scm: ditto.
* gnu/packages/cran.scm: ditto.
* gnu/packages/crates-io.scm: ditto.
* gnu/packages/emacs-xyz.scm: ditto.
* gnu/packages/golang.scm: ditto.
* gnu/packages/guile-xyz.scm: ditto.
* gnu/packages/haskell-xyz.scm: ditto.
* gnu/packages/java.scm: ditto.
* gnu/packages/julia-xyz.scm: ditto.
* gnu/packages/lisp-xyz.scm: ditto.
* gnu/packages/ocaml.scm: ditto.
* gnu/packages/perl.scm: ditto.
* gnu/packages/python-science.scm: ditto.
* gnu/packages/python-xyz.scm: ditto.
* gnu/packages/ruby.scm: ditto.
* gnu/packages/tex.scm: ditto.
| Christopher Baines |
| 2022-09-07 | gnu: python-pyvista: Update to 0.36.1....* gnu/packages/python-science.scm (python-pyvista): Update to 0.36.1.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Paul A. Patience |
| 2022-08-02 | gnu: python-pyvista: Update to 0.35.2....* gnu/packages/python-science.scm (python-pyvista): Update to 0.35.2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Paul A. Patience |
| 2022-08-02 | gnu: Add python-geosketch....* gnu/packages/python-science.scm (python-geosketch): New variable.
| Ricardo Wurmus |
| 2022-08-02 | gnu: Add python-fbpca....* gnu/packages/python-science.scm (python-fbpca): New variable.
| Ricardo Wurmus |
| 2022-07-15 | gnu: python-pyvista: Update to 0.35.1....* gnu/packages/python-science (python-pyvista): Update to 0.35.1.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience |
| 2022-07-08 | gnu: Add python-opt-einsum....* gnu/packages/python-science.scm (python-opt-einsum): New variable.
| Ricardo Wurmus |
