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2023-10-31gnu: r-htmltable: Update to 2.4.2....* gnu/packages/cran.scm (r-htmltable): Update to 2.4.2. [arguments]: Replace minified JavaScript. [native-inputs]: Add esbuild and js-jquery. Change-Id: Iacc17957c2a773ca651d3a9e980a3e4281874829 Ricardo Wurmus
2023-10-31gnu: r-rsqlite: Update to 2.3.2....* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.2. Change-Id: I97532cd5834e0aad84d7072f7f93bae612ad93bf Ricardo Wurmus
2023-10-31gnu: b43-tools: Use make-flags....* gnu/packages/firmware.scm (b43-tools)[arguments]: Add make-flags. Use make-flags in custom 'build and 'install phases. Remove trailing #t from phases. Change-Id: I8576351ecd571d191598943a2d143ab3e3e9da09 Efraim Flashner
2023-10-31gnu: python-radio-beam: Update to 0.3.6....* gnu/packages/astronomy.scm (python-radio-beam): Update to 0.3.6. [native-inputs]: Add python-setuptools-scm. Change-Id: I3be87a22b701119699d37104f8df4f3fab44d0c8 Maxim Cournoyer
2023-10-31gnu: python-spectral-cube: Update to 0.6.3....* gnu/packages/astronomy.scm (python-spectral-cube): Update to 0.6.3. [native-inputs]: Add python-setuptools-scm. Change-Id: I8b701081d2c8ea2fd8f25ca845e8e26760fdc094 Maxim Cournoyer
2023-10-31gnu: Add python-spectral-cube....* gnu/packages/astronomy.scm (python-spectral-cube): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Sharlatan Hellseher
2023-10-31gnu: Add python-aplpy....* gnu/packages/astronomy.scm (python-aplpy): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Sharlatan Hellseher
2023-10-31gnu: Add python-pyregion....* gnu/packages/astronomy.scm (python-pyregion): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Sharlatan Hellseher
2023-10-31gnu: Add python-pyavm....* gnu/packages/astronomy.scm (python-pyavm): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Sharlatan Hellseher
2023-10-31gnu: Add python-radio-beam....* gnu/packages/astronomy.scm (python-radio-beam): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Sharlatan Hellseher
2023-10-29gnu: opensmtpd: Update to 7.4.0p0 (bis)....This time fixing a segfault reported & debugged entirely by graywolf. See: <https://github.com/OpenSMTPD/OpenSMTPD/issues/1233> So, what went wrong here? Mostly me being entirely convinced, to the point of not even looking, that we have no opensmtpd system test. We do. Instead, I tested the update on my own mail server, which for entirely unhysterical raisins happens to link OpenSMTPd against OpenSSL and so just happens to sidestep this bug. Aiya. * gnu/packages/mail.scm (opensmtpd): Update to 7.4.0p0. [native-inputs]: Add pkg-config. [inputs]: Add libbsd. [arguments]: Add "--with-libbsd" to #:configure-flags. Co-authored-by: graywolf in #guix Change-Id: I5536b828eecd16f041ed9381b16bd7aa54158155 Tobias Geerinckx-Rice
2023-10-31gnu: Add r-radiogx....* gnu/packages/bioconductor.scm (r-radiogx): New variable. Change-Id: I8fd06a18bd68f9a3baa2cc129d62aef06528bc97 Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-coregx....* gnu/packages/bioconductor.scm (r-coregx): New variable. Change-Id: Ib54ba3c7bebdcc90748d4e4b0b2ce63b7f0fc1b8 Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-piano....* gnu/packages/bioconductor.scm (r-piano): New variable. Change-Id: I1bc2387563510c47614748423a3b510adc0486aa Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-bench....* gnu/packages/cran.scm (r-bench): New variable. Change-Id: I9948ff12729b08dd4016df272777651a6b6de2e0 Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-profmem....* gnu/packages/cran.scm (r-profmem): New variable. Change-Id: If99cf8e963601e9f0a664f12ef263a064b59b0d6 Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-relations....* gnu/packages/cran.scm (r-relations): New variable. Change-Id: I4bf67353aa7f7221592d274d61c74b83191a6281 Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-magicaxis....* gnu/packages/cran.scm (r-magicaxis): New variable. Change-Id: I9843dcf90cd6d85799fab688d6dccfcfacfad672 Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-celestial....* gnu/packages/cran.scm (r-celestial): New variable. Change-Id: I9ab9c6b6c79f2fb12d7391a75e7214bbeba675fc Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-nistunits....* gnu/packages/cran.scm (r-nistunits): New variable. Change-Id: I66328b54045a3125e5f3033605be88e3a1b2646a Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-r4rna....* gnu/packages/bioconductor.scm (r-r4rna): New variable. Change-Id: I1bde2a17b0ba4a97fa54161744f048dbfaf2217a Mădălin Ionel Patrașcu
2023-10-31gnu: Add r-r3cseq....* gnu/packages/bioconductor.scm (r-r3cseq): New variable. Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84 Mădălin Ionel Patrașcu
2023-10-31gnu: lvm2: Remove systemd rule....Fixes <https://issues.guix.gnu.org/65177>. Reported by Adrien 'neox' Bourmault <neox@gnu.org>. * gnu/packages/patches/lvm2-no-systemd.patch: New file. * gnu/packages/linux.scm (lvm2)[source]: Apply patch. * gnu/local.mk: Register new patch. Signed-off-by: Simon Tournier <zimon.toutoune@gmail.com> Change-Id: I6b9d583f5914cc127c067829b5891827c04608cb Yann Dupont
2023-10-31gnu: coturn: Update to 4.6.2....* gnu/packages/telephony.scm (coturn): Update to 4.6.2. Change-Id: If0b46af1a034a72a49c00b1e2a871ea636d203f2 Ricardo Wurmus
2023-10-29Revert "gnu: opensmtpd: Update to 7.4.0p0."...This reverts commit b6e8d587c4551f0fd28fcef96f33909a8ab8e9df pending investigation of a segfault reported by graywolf in #guix. Tobias Geerinckx-Rice
2023-10-29Revert "gnu: linux-libre@6: Enable Coreboot framebuffer support (again)."...This reverts commit 6d7e181ba18d11c92409a93936025fb46b9c8171. Tobias Geerinckx-Rice
2023-10-30gnu: Add python-ml-collections....* gnu/packages/machine-learning.scm (python-ml-collections): New variable. Change-Id: I9299fe4221f13d979266fccc7b9cdd96a8d6e678 Ricardo Wurmus
2023-10-30gnu: python-dm-tree: Use static abseil-cpp....* gnu/packages/python-xyz.scm (python-dm-tree)[inputs]: Replace abseil-cpp with static-abseil-cpp. [arguments]: Reference static libraries. Change-Id: I11b58ad907a3e59b98c28d6c2f6fb7bcc15be742 Ricardo Wurmus
2023-10-30gnu: Add static-abseil-cpp....* gnu/packages/cpp.scm (static-abseil-cpp): New variable. (make-static-abseil-cpp): New procedure. Change-Id: I0b0b17b31461baf1189d7c818a82c99baad253c1 Ricardo Wurmus
2023-10-30gnu: transmission: Update to 4.0.4....* gnu/packages/bittorrent.scm (transmission): Update to 4.0.4. [synopsis]: Remove "marketing phrases". Change-Id: Ibecdf14198ba926eea66ff5ba29ec05fbd27fde2 Signed-off-by: Christopher Baines <mail@cbaines.net> Leo Famulari
2023-10-30gnu: cockatrice: Update to 2.9.0....* gnu/packages/games.scm (cockatrice): Update to 2.9.0. Change-Id: Ia963a45ff49af40295329fd99db0dd039e314b77 Signed-off-by: Christopher Baines <mail@cbaines.net> Liliana Marie Prikler
2023-10-30gnu: labwc: Update to 0.6.5....* gnu/packages/wm.scm (labwc): Update to 0.6.5. [inputs]: Add librsvg. Change-Id: I2812e78aa5ee6e2a19ed5e8756aac0e0f83610db Signed-off-by: Christopher Baines <mail@cbaines.net> Ahmad Draidi
2023-10-30gnu: ansible: Update to 8.5.0....* gnu/packages/admin.scm (ansible): Update to 8.5.0. Change-Id: I38ac84a0945f3ba10e13246cf8ae95c3795b52b3 Signed-off-by: Christopher Baines <mail@cbaines.net> Jack Hill
2023-10-30gnu: Remove python-resolvelib@0.5....* gnu/packages/python-xyz.scm (python-resolvelib-0.5): Delete variable. This was only used by ansible-core which can now use the newer version. Change-Id: Ic40e21561807ed5faae466e13193892e4f9aa6ae Signed-off-by: Christopher Baines <mail@cbaines.net> Jack Hill
2023-10-30gnu: ansible-core: Update to 2.15.5 and fix tests....* gnu/packages/admin.scm (ansible-core): Update to 2.15.5. [#:phases]<check>: Enable tests that now pass and choose the right ansible-test to invoke. [propagated-inputs]: Replace python-resolvelib-0.5 with python-resolvelib. Change-Id: Ibda3222a16fefb1484affdb62e38a3a07ce61986 Signed-off-by: Christopher Baines <mail@cbaines.net> Jack Hill
2023-10-30gnu: Add r-consort....* gnu/packages/consort.scm (r-consort): New variable. Signed-off-by: Christopher Baines <mail@cbaines.net> Change-Id: I37bae26b3271f2c8e4d73bb72e11bc475168b0f7 Sebastian Gibb
2023-10-30gnu: Add online-judge-tools....* gnu/packages/python-xyz.scm (online-judge-tools): New variable. * gnu/packages/patches/online-judge-tools.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch file. Signed-off-by: Christopher Baines <mail@cbaines.net> Change-Id: I78315db15ca8205dff607e98388c404ede64fb60 gemmaro
2023-10-30gnu: Add python-online-judge-api-client....* gnu/packages/python-xyz.scm (python-online-judge-api-client): New variable. * gnu/packages/patches/python-online-judge-api-client-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch file. Signed-off-by: Christopher Baines <mail@cbaines.net> Change-Id: If407a070a52e66c723d042217a5ff6e1589efce1 gemmaro
2023-10-30gnu: Add aerich....* gnu/packages/databases.scm (aerich): New variable. Change-Id: I322d619dc80c943d50e28a96ba74d276784ab8da Signed-off-by: Christopher Baines <mail@cbaines.net> Giacomo Leidi
2023-10-30gnu: Add python-ddlparse....* gnu/packages/python-xyz.scm (python-ddlparse): New variable. Signed-off-by: Christopher Baines <mail@cbaines.net> Giacomo Leidi
2023-10-30gnu: Add ffmpeg-normalize....* gnu/packages/video.scm (ffmpeg-normalize): New variable. Signed-off-by: Christopher Baines <mail@cbaines.net> Vinicius Monego
2023-10-30gnu: Add ffmpeg-progress-yield....* gnu/packages/video.scm (ffmpeg-progress-yield): New variable. Signed-off-by: Christopher Baines <mail@cbaines.net> Vinicius Monego
2023-10-30gnu: Add r-voltron....* gnu/packages/bioinformatics.scm (r-voltron): New variable. Change-Id: I5f70cf613bf2c26c4ca119483c9ad3b0beba6502 Ricardo Wurmus
2023-10-30gnu: dezyne: Update to 2.17.7....* gnu/packages/dezyne.scm (dezyne): Update to 2.17.7. Change-Id: I278e4e17f49b15600689cebda04298de6bbc8a65 Janneke Nieuwenhuizen
2023-10-30gnu: nghttp2: Replace with 1.57.0....This release mitigates CVE-2023-44487. * gnu/packages/web.scm (nghttp2-1.57): New variable. (nghttp2)[replacement]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Philip McGrath
2023-10-30gnu: file-systems: Add xenfs to %pseudo-file-system-types....* gnu/system/file-systems.scm (%pseudo-file-system-types): Add xenfs. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Skyler Ferris
2023-10-30gnu: cuirass: Update to 1.2.0....* gnu/packages/ci.scm (cuirass): Update to 1.2.0. Change-Id: Iada634a9d66ea3bf1035084970cf560ff5303c28 Ludovic Courtès
2023-10-29gnu: passff-host: Fix builder issues....* gnu/packages/browser-extensions.scm (passff-host)[arguments]: Use `patch-shebang` instead of wrong `substitute*`, add newline after substitution. Change-Id: I6cd1d681e9e84bdeb24943dfe1d85d996f1a262b Clément Lassieur
2023-10-29gnu: emacs-julia-mode: Update to 0.4-0.7a8c868....* gnu/packages/emacs-xyz.scm (emacs-julia-mode): Update to 0.4-0.7a8c868. [arguments]: Convert to list of G-Expressions. Change-Id: I3d06dbe824ce989400d801118e8bca496ae4b3e2 Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> Simon Tournier
2023-10-29gnu: emacs-julia-mode: Exclude tests that fail with Emacs 29....* gnu/packages/emacs-xyz.scm (emacs-julia-mode)[#:phases]: Add ‘fix-tests’. Change-Id: I1da1077a7e7e077392458243b2d3cd44592ebd45 Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> Simon Tournier