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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 070148cb76..e0e8ce81b9 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1184,6 +1184,33 @@ high-throughput sequence analysis. The package is primarily useful to developers of other R packages who wish to make use of HTSlib.") (license license:lgpl2.0+)))) +(define-public r-scdesign2 + (let ((commit "554f2c4b1a7ee6cc04969a287df9b3b77d7bb2fe") + (revision "1")) + (package + (name "r-scdesign2") + (version (git-version "1.0.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/JSB-UCLA/scDesign2") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "09zkz6qdcx54092ab6761ja3pclax9xzana8dk8qvxrdbjshb8p7")))) + (properties `((upstream-name . "scDesign2"))) + (build-system r-build-system) + (propagated-inputs (list r-mass r-pscl)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/JSB-UCLA/scDesign2") + (synopsis "Statistical simulator for scRNA-seq with gene correlation") + (description + "This package offers a flexible statistical simulator for scRNA-seq data. +It can generate data that captures gene correlation. Additionally, it allows +for varying the number of cells and sequencing depth.") + (license license:expat)))) + (define-public r-scenic (let ((commit "cedf8490a634da550cea2c831544e5f7f14467d2") (revision "1")) |