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authorMaxim Cournoyer <maxim.cournoyer@gmail.com>2023-10-20 01:05:23 -0400
committerLudovic Courtès <ludo@gnu.org>2024-08-31 10:42:29 +0200
commit6bcc2f6571a632c4baaa47b5fc0fd2943b721f24 (patch)
treefeb748e0c447f12c7d771901841bfe901554596b /gnu
parentbff03561c4df2325165f8583989e4165dcec2eb2 (diff)
downloadguix-6bcc2f6571a632c4baaa47b5fc0fd2943b721f24.tar.gz
guix-6bcc2f6571a632c4baaa47b5fc0fd2943b721f24.zip
gnu: mafft: Add bash-minimal to inputs.
* gnu/packages/bioinformatics.scm (mafft): Delete trailing #t. [inputs]: Add bash-minimal. Change-Id: Id30d22dc37ee57591f17dc116de81500b09adf3c
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 3 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f62f83c221..5797993500 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8810,8 +8810,7 @@ selection, etc.).")
(("^rm -f mafft-distance mafft-distance.exe") ")#")
;; do not install MAN pages in libexec folder
(("^\t\\$\\(INSTALL\\) -m 644 \\$\\(MANPAGES\\) \
-\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))
- #t))
+\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))))
(add-after 'enter-dir 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* '("pairash.c"
@@ -8819,8 +8818,7 @@ selection, etc.).")
(("perl") (which "perl"))
(("([\"`| ])awk" _ prefix)
(string-append prefix (which "awk")))
- (("grep") (which "grep")))
- #t))
+ (("grep") (which "grep")))))
(delete 'configure)
(add-after 'install 'wrap-programs
(lambda* (#:key inputs outputs #:allow-other-keys)
@@ -8833,7 +8831,7 @@ selection, etc.).")
`("PATH" ":" prefix (,path))))
(find-files bin))))))))
(inputs
- (list perl ruby gawk grep coreutils))
+ (list bash-minimal perl ruby gawk grep coreutils))
(home-page "https://mafft.cbrc.jp/alignment/software/")
(synopsis "Multiple sequence alignment program")
(description