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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-05-05 23:43:43 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-05-06 00:14:40 +0200 |
| commit | 70d04dc1838685b3b4ed1c4e827ed3a1da8ae5bb (patch) | |
| tree | dfb93f6fd1b4172ea841f78e47d4ce559fca52bb /gnu/packages | |
| parent | 4540727a21e7c467270da9fd4ae73f11541d2087 (diff) | |
| download | guix-70d04dc1838685b3b4ed1c4e827ed3a1da8ae5bb.tar.gz guix-70d04dc1838685b3b4ed1c4e827ed3a1da8ae5bb.zip | |
gnu: r-scater: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 4 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f09fccb8f1..367fadb8cc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10570,28 +10570,27 @@ libraries.") (define-public r-scater (package (name "r-scater") - (version "1.10.1") + (version "1.12.0") (source (origin (method url-fetch) (uri (bioconductor-uri "scater" version)) (sha256 (base32 - "0rijhy7g5qmcn927y1wyd63la1fhyar9fv1hccsqd23jd98yc55a")))) + "0qwwkas9va4gsnn1ghg9wznqgr0wq5y3pnf7ym4h6q9qvhky41vk")))) (build-system r-build-system) (propagated-inputs `(("r-beachmat" ,r-beachmat) ("r-biocgenerics" ,r-biocgenerics) + ("r-biocneighbors" ,r-biocneighbors) ("r-biocparallel" ,r-biocparallel) + ("r-biocsingular" ,r-biocsingular) ("r-delayedarray" ,r-delayedarray) ("r-delayedmatrixstats" ,r-delayedmatrixstats) ("r-dplyr" ,r-dplyr) ("r-ggbeeswarm" ,r-ggbeeswarm) ("r-ggplot2" ,r-ggplot2) ("r-matrix" ,r-matrix) - ("r-plyr" ,r-plyr) ("r-rcpp" ,r-rcpp) - ("r-reshape2" ,r-reshape2) - ("r-rhdf5lib" ,r-rhdf5lib) ("r-s4vectors" ,r-s4vectors) ("r-singlecellexperiment" ,r-singlecellexperiment) ("r-summarizedexperiment" ,r-summarizedexperiment) |