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authorRicardo Wurmus <rekado@elephly.net>2019-05-05 23:42:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-05-06 00:14:39 +0200
commit4540727a21e7c467270da9fd4ae73f11541d2087 (patch)
tree7d7b6f8e81faba05264e80dc2472865717fbed4f /gnu/packages
parentf2a63d158850cc541a69807c8974fcf51634e92f (diff)
downloadguix-4540727a21e7c467270da9fd4ae73f11541d2087.tar.gz
guix-4540727a21e7c467270da9fd4ae73f11541d2087.zip
gnu: r-scran: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0. [propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 5 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 11c9db5d7a..f09fccb8f1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10606,29 +10606,31 @@ quality control.")
(define-public r-scran
(package
(name "r-scran")
- (version "1.10.2")
+ (version "1.12.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "scran" version))
(sha256
(base32
- "07mgilr3gq3lnrm1fjm9zhz4w7970bjhsykln1drqy9gkzj5sn7g"))))
+ "19cyjjzgmhswni6js4bhbj5djp976sl9n648kk7viazgkspql884"))))
(build-system r-build-system)
(propagated-inputs
`(("r-beachmat" ,r-beachmat)
+ ("r-bh" ,r-bh)
("r-biocgenerics" ,r-biocgenerics)
("r-biocneighbors" ,r-biocneighbors)
("r-biocparallel" ,r-biocparallel)
+ ("r-biocsingular" ,r-biocsingular)
("r-delayedarray" ,r-delayedarray)
("r-delayedmatrixstats" ,r-delayedmatrixstats)
+ ("r-dqrng" ,r-dqrng)
("r-dynamictreecut" ,r-dynamictreecut)
("r-edger" ,r-edger)
("r-igraph" ,r-igraph)
("r-limma" ,r-limma)
("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp)
- ("r-rhdf5lib" ,r-rhdf5lib)
("r-s4vectors" ,r-s4vectors)
("r-scater" ,r-scater)
("r-singlecellexperiment" ,r-singlecellexperiment)