diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2021-12-05 19:17:41 +0100 |
---|---|---|
committer | Ricardo Wurmus <rekado@elephly.net> | 2021-12-05 19:17:41 +0100 |
commit | 9bc0f45df5d6aed217020b1183dca54989844fb0 (patch) | |
tree | d927e89949ff7f65b5059bc94273c53fd43d0763 /gnu/packages/statistics.scm | |
parent | 6db3c536e89deb8a204e756f427614925a7d2582 (diff) | |
parent | 10554e0a57feeea470127a1d0441957d1776b0bd (diff) | |
download | guix-9bc0f45df5d6aed217020b1183dca54989844fb0.tar.gz guix-9bc0f45df5d6aed217020b1183dca54989844fb0.zip |
Merge remote-tracking branch 'origin/master' into core-updates-frozen
Diffstat (limited to 'gnu/packages/statistics.scm')
-rw-r--r-- | gnu/packages/statistics.scm | 75 |
1 files changed, 43 insertions, 32 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index b09076106f..dc1dc6a66a 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1501,13 +1501,13 @@ from knitr Rmarkdown.") (define-public r-microbenchmark (package (name "r-microbenchmark") - (version "1.4-7") + (version "1.4.9") (source (origin (method url-fetch) (uri (cran-uri "microbenchmark" version)) (sha256 (base32 - "1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6")))) + "1lpzpffnjiwnxxl0jhrvyj88fvxqksnpccbpq953xwqf6ypjqga4")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/microbenchmark/") (synopsis "Accurate timing functions for R") @@ -1563,13 +1563,13 @@ you call it again with the same arguments it returns the pre-computed value.") (define-public r-crayon (package (name "r-crayon") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (cran-uri "crayon" version)) (sha256 (base32 - "1ir963s6zk9l32fw257y54p7898cd7z7yazkn9h6j2cdfhpf9dh8")))) + "0mxq87qsvz5znfncrb6yjchzv6iwpn9lr386i02y6xiycizkjd7f")))) (build-system r-build-system) (home-page "https://github.com/gaborcsardi/crayon") (synopsis "Colored terminal output for R") @@ -1683,14 +1683,14 @@ like tidy evaluation.") (define-public r-tibble (package (name "r-tibble") - (version "3.1.5") + (version "3.1.6") (source (origin (method url-fetch) (uri (cran-uri "tibble" version)) (sha256 (base32 - "1ryv1r3cah1s8dyqdhcb0yl81r384jvgc4d1q9zwsrrsd2x8fqys")))) + "14l2i6ri3v5y0h8g0ahc4kz0pdqsp5yabxk2w8wavss6y44xjcsv")))) (build-system r-build-system) (propagated-inputs `(("r-ellipsis" ,r-ellipsis) @@ -1999,6 +1999,16 @@ inference for statistical models.") (define-public python2-statsmodels (let ((stats (package-with-python2 python-statsmodels))) (package/inherit stats + ;; Version 0.11.1 and later does not work with Python 2. It may build + ;; fine but loading modules fails. + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "statsmodels" version)) + (sha256 + (base32 + "0fxs8a7sp4d7jvqlm36yi45i2d28kjfvraf9q8i9jr1chhxgjqb4")))) (propagated-inputs `(("python2-pytz" ,python2-pytz) ("python2-numpy" ,python2-numpy) @@ -2145,14 +2155,14 @@ limited to R.") (define-public r-backports (package (name "r-backports") - (version "1.2.1") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "backports" version)) (sha256 (base32 - "1mf2nz78l97lbxyagv55bcxrny51ds8g28h307cfa1g3ayylp0x2")))) + "0bc14x4gyw4gnvm4hrvg5cmmrq449kfza3l14wdgp642ra8iw8sg")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/backports") (synopsis "Reimplementations of functions introduced since R 3.0.0") @@ -2428,13 +2438,13 @@ functions make it easy to control additional request components.") (define-public r-git2r (package (name "r-git2r") - (version "0.28.0") + (version "0.29.0") (source (origin (method url-fetch) (uri (cran-uri "git2r" version)) (sha256 (base32 - "1wjmbs9cmm16pm3g0rmqp7cxxyh95m5lgx4fx5bpgj6j466i8vff")))) + "13nlrhma6kavvhranb43w3003vadfkyrn2f4l3r63iqavj0s3xzq")))) (build-system r-build-system) (inputs `(("libgit2" ,libgit2) @@ -2558,13 +2568,13 @@ time-of-day values, based on the @code{difftime} class.") (define-public r-readr (package (name "r-readr") - (version "2.0.2") + (version "2.1.0") (source (origin (method url-fetch) (uri (cran-uri "readr" version)) (sha256 (base32 - "05bnvcc55i0xjilfrqx3700mwiz8sgihq1wxlbvvr8nxa7bmxc4q")))) + "03d7y4k9w5vcm7fwlcaw715ff7d953i92jwbp7ynrqcr09kw6zm0")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -2651,13 +2661,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.10.7.0.0") + (version "0.10.7.3.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "1x35xb5yfslsdpaz9msl5p9f7gilnbkhwvq7pbycwasvkp2fma01")))) + "0qk25x8naci76fqcd8jkv8gnba6sj61vkv9yf8498fwff1kvf41p")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) (propagated-inputs @@ -3074,13 +3084,13 @@ multiple breakpoints are allowed.") (define-public r-snow (package (name "r-snow") - (version "0.4-3") + (version "0.4-4") (source (origin (method url-fetch) (uri (cran-uri "snow" version)) (sha256 (base32 - "1n3n8pva9s34fvlw32yng0x416lmbv7q1fsd0ywa4kikmxym64l5")))) + "1j8kvf3imxijsqkdjz4i9s7qggfxqrpas46y5wz6za92y937yn44")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/snow") (synopsis "Support for simple parallel computing in R") @@ -3499,13 +3509,13 @@ using the multicore functionality of the parallel package.") "datatables-extensions/Select")))) (package (name "r-dt") - (version "0.19") + (version "0.20") (source (origin (method url-fetch) (uri (cran-uri "DT" version)) (sha256 (base32 - "04rv1rprqlc56hycxpqkbmwmq4wjvmanq2lwxrflmf2s46pbv9ms")) + "17xs18i439p15agyk7z2xyyrwgrpn5pw09kd3jwxn7qhxi4pyvf6")) (modules '((guix build utils))) (snippet '(for-each delete-file @@ -3650,13 +3660,13 @@ analysis of large sparse or dense matrices.") (define-public r-glmnet (package (name "r-glmnet") - (version "4.1-2") + (version "4.1-3") (source (origin (method url-fetch) (uri (cran-uri "glmnet" version)) (sha256 - (base32 "1kfd8kfhapx2cxw6qnkbs502c3kya4pd9qmf0mk76cdlq1c2paq6")))) + (base32 "0nij8v44b5dvp1vc843sfkl9ds83n6g687m2p37q1rdn82m3bg34")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran) @@ -3664,6 +3674,8 @@ analysis of large sparse or dense matrices.") (propagated-inputs `(("r-foreach" ,r-foreach) ("r-matrix" ,r-matrix) + ("r-rcpp" ,r-rcpp) + ("r-rcppeigen" ,r-rcppeigen) ("r-shape" ,r-shape) ("r-survival" ,r-survival))) (home-page "https://www.jstatsoft.org/article/view/v033i01") @@ -5103,14 +5115,14 @@ models, generalized linear models and model-based clustering.") (define-public r-mclust (package (name "r-mclust") - (version "5.4.7") + (version "5.4.8") (source (origin (method url-fetch) (uri (cran-uri "mclust" version)) (sha256 (base32 - "08scl72llpinfijiyx14yqvmx8lma9jvh8h92v9ynnzfr9kadxa5")))) + "0j79a1nidwxl62x8j97k09qjxladp9irw5z1x1q5gyy6zxskvh8i")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran) @@ -5273,14 +5285,14 @@ generally.") (define-public r-robust (package (name "r-robust") - (version "0.5-0.0") + (version "0.6-1") (source (origin (method url-fetch) (uri (cran-uri "robust" version)) (sha256 (base32 - "1ks5scp8bnicl9j1r8yrmz668fjs6ifdmi540zw6d2ck500bbw42")))) + "0z8i0qqlsa6vpl457qir3dlsynhjfn2g22436d776vxwyqjx4vs9")))) (build-system r-build-system) (propagated-inputs `(("r-fit-models" ,r-fit-models) @@ -5519,14 +5531,14 @@ expected shortfall risk are also included.") (define-public r-nloptr (package (name "r-nloptr") - (version "1.2.2.2") + (version "1.2.2.3") (source (origin (method url-fetch) (uri (cran-uri "nloptr" version)) (sha256 (base32 - "0whkilb85k4wixvr3k7rygfw1rcs1fs9h8c18kz4p3y1k9hsj3p8")))) + "1zznk9f2w2g02zqzay21k8xqzfvc6icxfzp6bx2wpd77sm7vf25g")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr) ; for building vignettes @@ -5629,13 +5641,13 @@ Companion to Applied Regression, Third Edition, Sage.") (define-public r-car (package (name "r-car") - (version "3.0-11") + (version "3.0-12") (source (origin (method url-fetch) (uri (cran-uri "car" version)) (sha256 - (base32 "0b2l35656bi75hfvnjhzhlnrnbpjn0vv7nvny8gn65gm0rr94b5k")))) + (base32 "00kk8l71508f73kyn21is1mx6kjbrzdq3ls94c5ajhiqmvpsd6dq")))) (build-system r-build-system) (propagated-inputs `(("r-abind" ,r-abind) @@ -5647,8 +5659,7 @@ Companion to Applied Regression, Third Edition, Sage.") ("r-nlme" ,r-nlme) ("r-nnet" ,r-nnet) ("r-pbkrtest" ,r-pbkrtest) - ("r-quantreg" ,r-quantreg) - ("r-rio" ,r-rio))) + ("r-quantreg" ,r-quantreg))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://r-forge.r-project.org/projects/car/") @@ -5915,14 +5926,14 @@ easy and fun.") (define-public r-fdrtool (package (name "r-fdrtool") - (version "1.2.16") + (version "1.2.17") (source (origin (method url-fetch) (uri (cran-uri "fdrtool" version)) (sha256 (base32 - "1aap4k1l3a9m43374xq688mqnzkgqx8l021li262r3h1xr4adpp7")))) + "1pf554vb902vavgqc4c0kgghywbgcvr3lkkr414bxngavcd60lil")))) (build-system r-build-system) (home-page "http://strimmerlab.org/software/fdrtool/") (synopsis "Estimation of false discovery rates and higher criticism") |