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# GNU Guix --- Functional package management for GNU
# Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
# Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
# Copyright © 2018 Chris Marusich <cmmarusich@gmail.com>
#
# This file is part of GNU Guix.
#
# GNU Guix is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 3 of the License, or (at
# your option) any later version.
#
# GNU Guix is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

#
# Test 'guix system', mostly error reporting.
#

set -e

guix system --version

tmpfile="t-guix-system-$$"
errorfile="t-guix-system-error-$$"

# Note: This directory is chosen outside $builddir so that relative file name
# canonicalization doesn't mess up with 'current-source-directory', used by
# 'local-file' ('load' forces 'relative' for
# %FILE-PORT-NAME-CANONICALIZATION.)
tmpdir="${TMPDIR:-/tmp}/t-guix-system-$$"
mkdir "$tmpdir"

trap 'rm -f "$tmpfile" "$errorfile" "$tmpdir"/*; rmdir "$tmpdir"' EXIT

# Reporting of syntax errors.

cat > "$tmpfile"<<EOF
;; This is line 1, and the next one is line 2.
   (operating-system)
;; The 'T' is at column 3.
EOF

if guix system vm "$tmpfile" 2> "$errorfile"
then
    # This must not succeed.
    exit 1
else
    cat "$errorfile"
    grep "$tmpfile:2:3:.*missing.* initializers" "$errorfile"
fi


cat > "$tmpfile"<<EOF
;; This is line 1, and the next one is line 2.
   (operating-system
;; This is line 3, and there is no closing paren!
EOF

if guix system vm "$tmpfile" 2> "$errorfile"
then
    # This must not succeed.
    exit 1
else
    cat "$errorfile"

    # Guile 3.0.6 gets line/column numbers for 'read-error' wrong
    # (zero-indexed): <https://bugs.gnu.org/48089>.
    grep "$tmpfile:4:1: missing closing paren" "$errorfile" || \
    grep "$tmpfile:3:0: missing closing paren" "$errorfile"
fi


# Reporting of module not found errors.

cat > "$tmpfile" <<EOF
;; Line 1.
(use-modules (gnu))
  (use-service-modules openssh)
EOF

if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else
    grep "$tmpfile:3:2: .*module .*openssh.*not found" "$errorfile"
    grep "Try.*use-service-modules ssh" "$errorfile"
fi

cat > "$tmpfile" <<EOF
;; Line 1.
(use-modules (gnu))
  (use-package-modules qemu)
EOF

if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else
    grep "$tmpfile:3:2: .*module .*qemu.*not found" "$errorfile"
    grep "Try.*use-package-modules virtualization" "$errorfile"
fi

# Reporting of unbound variables.

cat > "$tmpfile" <<EOF
(use-modules (gnu))                                   ; 1
(use-service-modules networking)                      ; 2

(operating-system                                     ; 4
  (host-name "antelope")                              ; 5
  (timezone "Europe/Paris")                           ; 6
  (locale "en_US.UTF-8")                              ; 7

  (bootloader (GRUB-config (targets (list "/dev/sdX"))))        ; 9
  (file-systems (cons (file-system
                        (device (file-system-label "root"))
                        (mount-point "/")
                        (type "ext4"))
                      %base-file-systems)))
EOF

if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else
    if test "`guile -c '(display (effective-version))'`" = 3.0
    then
	# FIXME: With Guile 3.3.0 the error is reported on line 11.
	# See <https://bugs.gnu.org/38388>.
	grep "$tmpfile:[0-9]\+:[0-9]\+:.*GRUB-config.*[Uu]nbound variable" "$errorfile"
    elif test "`guile -c '(display (effective-version))'`" = 2.2
    then
	# FIXME: With Guile 2.2.0 the error is reported on line 4.
	# See <http://bugs.gnu.org/26107>.
	grep "$tmpfile:[49]:[0-9]\+:.*GRUB-config.*[Uu]nbound variable" "$errorfile"
    else
	grep "$tmpfile:9:[0-9]\+:.*GRUB-config.*[Uu]nbound variable" "$errorfile"
    fi
fi

cat > "$tmpfile" <<EOF
(use-modules (gnu))                                    ; 1

(operating-system                                      ; 3
  (file-systems (cons (file-system                     ; 4
                        (device (file-system-label "root"))
                        (mount-point "/")              ; 6
                        (type "ext4"))))               ; 7 (!!)
                      %base-file-systems)
EOF

if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else
    # Here '%base-file-systems' appears as if it were a field specified of the
    # enclosing 'operating-system' form due to parenthesis mismatch.
    grep "$tmpfile:3:[0-9]\+:.*%base-file-system.*invalid field specifier" \
	 "$errorfile"
fi

OS_BASE='
  (host-name "antelope")
  (timezone "Europe/Paris")
  (locale "en_US.UTF-8")

  (bootloader (bootloader-configuration
               (bootloader grub-bootloader)
               (targets (list "/dev/sdX"))))
  (file-systems (cons (file-system
                        (device (file-system-label "root"))
                        (mount-point "/")
                        (type "ext4"))
                      %base-file-systems))
'

# Reporting of duplicate service identifiers.

cat > "$tmpfile" <<EOF
(use-modules (gnu))
(use-service-modules networking)

(operating-system
  $OS_BASE
  (services (cons* (service dhcp-client-service-type)
                   (service dhcp-client-service-type) ;twice!
                   %base-services)))
EOF

if guix system vm "$tmpfile" 2> "$errorfile"
then
    # This must not succeed.
    exit 1
else
    grep "service 'networking'.*more than once" "$errorfile"
fi

# Reporting unmet shepherd requirements.

cat > "$tmpfile" <<EOF
(use-modules (gnu) (gnu services shepherd))
(use-service-modules networking)

(define buggy-service-type
  (shepherd-service-type
    'buggy
    (lambda _
      (shepherd-service
        (provision '(buggy!))
        (requirement '(does-not-exist))
        (start #t)))
    (description "Buggy.")))

(operating-system
  $OS_BASE
  (services (cons (service buggy-service-type #t)
                  %base-services)))
EOF

if guix system build "$tmpfile" 2> "$errorfile"
then
    exit 1
else
    grep "service 'buggy!'.*'does-not-exist'.*not provided" "$errorfile"
fi

# Reporting inconsistent user accounts.

make_user_config ()
{
    cat > "$tmpfile" <<EOF
(use-modules (gnu))
(use-service-modules networking)

(operating-system
  (host-name "antelope")
  (timezone "Europe/Paris")
  (locale "en_US.UTF-8")

  (bootloader (bootloader-configuration
                (bootloader grub-bootloader)
                (targets (list "/dev/sdX"))))
  (file-systems (cons (file-system
                        (device (file-system-label "root"))
                        (mount-point "/")
                        (type "ext4"))
                      %base-file-systems))
  (users (list (user-account
                 (name "dave")
                 (home-directory "/home/dave")
                 (group "$1")
                 (supplementary-groups '("$2"))))))
EOF
}

make_user_config "users" "wheel"
guix system build "$tmpfile" -n       # succeeds

guix system build "$tmpfile" -d	      # succeeds
guix system build "$tmpfile" -d | grep '\.drv$'

guix system vm "$tmpfile" -d	      # succeeds
guix system vm "$tmpfile" -d | grep '\.drv$'

# Make sure the behavior is deterministic (<https://bugs.gnu.org/32652>).
drv1="`guix system vm "$tmpfile" -d`"
drv2="`guix system vm "$tmpfile" -d`"
test "$drv1" = "$drv2"
drv1="`guix system image -t iso9660 "$tmpfile" -d`"
drv2="`guix system image -t iso9660 "$tmpfile" -d`"
test "$drv1" = "$drv2"

# Check whether the graph commands work as expected.
guix system extension-graph "$tmpfile" | grep 'label = "file-systems"'
guix system shepherd-graph "$tmpfile" | grep 'label = "guix-daemon"'

make_user_config "group-that-does-not-exist" "users"
if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else grep "primary group.*group-that-does-not-exist.*undeclared" "$errorfile"; fi

make_user_config "users" "group-that-does-not-exist"
if guix system build "$tmpfile" -n 2> "$errorfile"
then false
else grep "supplementary group.*group-that-does-not-exist.*undeclared" "$errorfile"; fi

# Try 'local-file' and relative file name resolution.

cat > "$tmpdir/config.scm"<<EOF
(use-modules (gnu))
(use-service-modules networking)

(operating-system
  $OS_BASE
  (services (cons (service tor-service-type
                           (tor-configuration
                             (config-file (local-file "my-torrc"))))
                  %base-services)))
EOF

cat > "$tmpdir/my-torrc"<<EOF
# This is an example file.
EOF

# In both cases 'my-torrc' should be properly resolved.
guix system build "$tmpdir/config.scm" -n
(cd "$tmpdir"; guix system build "config.scm" -n)

# Check that we get a warning when passing 'local-file' a non-literal relative
# file name.
cat > "$tmpdir/config.scm" <<EOF
(use-modules (guix))

(define (bad-local-file file)
  (local-file file))

(bad-local-file "whatever.scm")
EOF
! guix system build "$tmpdir/config.scm" -n
guix system build "$tmpdir/config.scm" -n 2>&1 | \
    grep "config\.scm:4:2: warning:.*whatever.*relative to current directory"

# Searching.
guix system search tor | grep "^name: tor"
guix system search tor | grep "^shepherdnames: tor"
guix system search anonym network | grep "^name: tor"
guix system search . > "$tmpdir/search"
test $(wc -l < "$tmpdir/search") -gt 500
rm "$tmpdir/search"

# Below, use -n (--dry-run) for the tests because if we actually tried to
# build these images, the commands would take hours to run in the worst case.

# Verify that the examples can be built.
for example in gnu/system/examples/*.tmpl; do
    if echo "$example" | grep hurd; then
        target="--target=i586-pc-gnu"
    else
        target=
    fi
    guix system -n disk-image $target "$example"
done

# Verify that the images can be built.
guix system -n vm gnu/system/examples/vm-image.tmpl
guix system -n image gnu/system/images/pinebook-pro.scm
guix system -n image -t qcow2 gnu/system/examples/vm-image.tmpl
guix system -n image -t iso9660 gnu/system/examples/bare-bones.tmpl
guix system -n docker-image gnu/system/examples/docker-image.tmpl

# Verify that at least the raw image type is available.
guix system --list-image-types | grep "raw"
))) (build-system python-build-system) (propagated-inputs `(("python-dateutil" ,python-dateutil) ("python-entrypoints" ,python-entrypoints) ("python-jupyter-core" ,python-jupyter-core) ("python-jupyter-protocol" ,python-jupyter-protocol) ("python-pyzmq" ,python-pyzmq) ("python-traitlets" ,python-traitlets))) (native-inputs `(("python-ipykernel" ,python-ipykernel) ("python-ipython" ,python-ipython) ("python-mock" ,python-mock) ("python-pytest" ,python-pytest))) (home-page "https://jupyter.org") (synopsis "Discover, launch, and communicate with Jupyter kernels") (description "This package is an experimental refactoring of the machinery for launching and using Jupyter kernels.") (license license:bsd-3) (properties '((upstream-name . "jupyter_kernel_mgmt"))))) (define-public python-jupyter-kernel-test (package (name "python-jupyter-kernel-test") (version "0.3") (home-page "https://github.com/jupyter/jupyter_kernel_test") (source (origin ;; PyPI has a ".whl" file but not a proper source release. ;; Thus, fetch code from Git. (method git-fetch) (uri (git-reference (url home-page) (commit version))) (file-name (git-file-name name version)) (sha256 (base32 "00iy74i4i8is6axb9vlsm0b9wxkvyyxnbl8r0i4gaj3xd788jm83")))) (build-system python-build-system) (arguments ;; The repo doesn't contain a "setup.py" file so install files manually. '(#:phases (modify-phases %standard-phases (delete 'build) (delete 'check) (replace 'install (lambda* (#:key inputs outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (version (python-version (assoc-ref inputs "python"))) (pydir (string-append out "/lib/python" version "/site-packages/" "jupyter_kernel_test"))) (for-each (lambda (file) (install-file file pydir)) (find-files "jupyter_kernel_test" "\\.py$")) #t)))))) (propagated-inputs `(("python-jupyter-kernel-mgmt" ,python-jupyter-kernel-mgmt) ("python-jupyter-protocol" ,python-jupyter-protocol) ("python-jsonschema" ,python-jsonschema))) (synopsis "Test Jupyter kernels") (description "@code{jupyter_kernel_test} is a tool for testing Jupyter kernels. It tests kernels for successful code execution and conformance with the @uref{https://jupyter-client.readthedocs.io/en/latest/messaging.html, Jupyter Messaging Protocol}.") (license license:bsd-3))) (define-public xeus (package (name "xeus") (version "0.23.2") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/QuantStack/xeus") (commit version))) (sha256 (base32 "1m1b6z1538r7mv2ggn7bdbd9570ja7cadplq64zl8rgl2c8vdi2a")) (file-name (git-file-name name version)))) (build-system cmake-build-system) (arguments '(#:configure-flags '("-DBUILD_STATIC_LIBS=OFF" "-DDISABLE_ARCH_NATIVE=ON" ;no '-march=native' "-DBUILD_TESTING=ON"))) (native-inputs `(("pkg-config" ,pkg-config) ;; The following inputs are used by the test suite. ("googletest" ,googletest) ("python-pytest" ,python-pytest) ("python" ,python-3) ("python-jupyter-kernel-test" ,python-jupyter-kernel-test) ("python-jupyter-client" ,python-jupyter-client))) (inputs `(("xtl" ,xtl) ("json-modern-cxx" ,json-modern-cxx) ("cppzmq" ,cppzmq) ("zeromq" ,zeromq) ("openssl" ,openssl) ("util-linux" ,util-linux "lib"))) ;libuuid (home-page "https://quantstack.net/xeus") (synopsis "C++ implementation of the Jupyter Kernel protocol") (description "@code{xeus} is a library meant to facilitate the implementation of kernels for Jupyter. It takes the burden of implementing the Jupyter Kernel protocol so developers can focus on implementing the interpreter part of the kernel. Several Jupyter kernels are built upon @code{xeus}, such as @code{xeus-cling}, a kernel for the C++ programming language, and @code{xeus-python}, an alternative Python kernel for Jupyter.") (license license:bsd-3))) (define-public python-jupyterlab-pygments (package (name "python-jupyterlab-pygments") (version "0.1.2") (source (origin (method url-fetch) (uri (pypi-uri "jupyterlab_pygments" version)) (sha256 (base32 "0ij14mmnc39nmf84i0av6j9glazjic7wzv1qyhr0j5966s3s1kfg")))) (build-system python-build-system) (arguments '(#:tests? #false)) ; there are no tests (propagated-inputs `(("python-pygments" ,python-pygments))) (home-page "https://jupyter.org") (synopsis "Pygments theme using JupyterLab CSS variables") (description "This package contains a syntax coloring theme for pygments making use of the JupyterLab CSS variables.") (license license:bsd-3))) (define-public python-jupyter-packaging (package (name "python-jupyter-packaging") (version "0.9.1") (source (origin (method url-fetch) (uri (pypi-uri "jupyter_packaging" version)) (sha256 (base32 "0r015c0m713d19asmpimsw6bk2sqv2lpd2nccgjzjdj5h1crg0bg")))) (build-system python-build-system) (propagated-inputs `(("python-deprecation" ,python-deprecation) ("python-packaging" ,python-packaging) ("python-setuptools" ,python-setuptools) ("python-tomlkit" ,python-tomlkit) ("python-wheel" ,python-wheel))) (native-inputs `(("python-pypa-build" ,python-pypa-build) ("python-coverage" ,python-coverage) ("python-pytest" ,python-pytest) ("python-pytest-cov" ,python-pytest-cov) ("python-pytest-mock" ,python-pytest-mock))) (home-page "https://jupyter.org") (synopsis "Jupyter packaging utilities") (description "This package provides tools to help build and install Jupyter Python packages that require a pre-build step that may include JavaScript build steps.") (license license:bsd-3))) (define-public python-jupyter-server (package (name "python-jupyter-server") (version "1.10.2") (source (origin (method url-fetch) (uri (pypi-uri "jupyter_server" version)) (sha256 (base32 "1gvjbsw5nl94hz02rnkr4g4kkvh9fz7i45vz17hzwyvdpj7bd8yk")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (replace 'check (lambda* (#:key inputs outputs tests? #:allow-other-keys) (when tests? (add-installed-pythonpath inputs outputs) (let ((home (string-append (getcwd) "/guix-home"))) (setenv "HOME" home)) ;; Add jupyter-server executable to PATH. (setenv "PATH" (string-append (assoc-ref outputs "out") "/bin:" (getenv "PATH"))) (with-directory-excursion "jupyter_server" ;; The pytest fixtures are only loaded when the file is ;; called conftest.py. (rename-file "pytest_plugin.py" "conftest.py") (invoke "pytest" "-vv" ;; Fails with internal server error "-k" "not test_list_formats" ;; Integration tests require a server. "-m" "not integration_test")))))))) (propagated-inputs `(("python-anyio" ,python-anyio) ("python-argon2-cffi" ,python-argon2-cffi) ("python-ipython-genutils" ,python-ipython-genutils) ("python-jinja2" ,python-jinja2) ("python-jupyter-client" ,python-jupyter-client) ("python-jupyter-core" ,python-jupyter-core) ("python-nbconvert" ,python-nbconvert) ("python-nbformat" ,python-nbformat) ("python-prometheus-client" ,python-prometheus-client) ("python-pyzmq" ,python-pyzmq) ("python-requests-unixsocket" ,python-requests-unixsocket) ("python-send2trash" ,python-send2trash) ("python-terminado" ,python-terminado) ("python-tornado" ,python-tornado-6) ("python-traitlets" ,python-traitlets) ("python-websocket-client" ,python-websocket-client))) (native-inputs `(("python-coverage" ,python-coverage) ("python-ipykernel" ,python-ipykernel) ("python-pytest" ,python-pytest) ("python-pytest-console-scripts" ,python-pytest-console-scripts) ("python-pytest-cov" ,python-pytest-cov) ("python-pytest-mock" ,python-pytest-mock) ("python-pytest-tornasync" ,python-pytest-tornasync) ("python-requests" ,python-requests))) (home-page "https://jupyter.org") (synopsis "Core services, APIs, and REST endpoints for Jupyter web applications") (description "This package provides the backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications.") (license license:expat))) (define-public python-jupyterlab-widgets (package (name "python-jupyterlab-widgets") (version "1.0.0") (source (origin (method url-fetch) (uri (pypi-uri "jupyterlab_widgets" version)) (sha256 (base32 "0y7vhhas3qndiypcpcfnhrj9n92v2w4hdc86nn620s9h9nl2j6jw")))) (build-system python-build-system) (native-inputs `(("python-jupyter-packaging" ,python-jupyter-packaging) ("python-setuptools" ,python-setuptools))) (home-page "https://github.com/jupyter-widgets/ipywidgets") (synopsis "Interactive widgets for Jupyter Notebooks") (description "ipywidgets, also known as jupyter-widgets or simply widgets, are interactive HTML widgets for Jupyter notebooks and the IPython kernel.") (license license:bsd-3))) (define-public python-nbclient (package (name "python-nbclient") (version "0.5.3") (source (origin (method url-fetch) (uri (pypi-uri "nbclient" version)) (sha256 (base32 "172q4r6mq0lg394di0pc6ipvniy14jg38wkdsj48r366609jf5yv")))) (build-system python-build-system) ;; Tests require a kernel via python-ipykernel, and also tools from ;; nbconvert. (arguments '(#:tests? #false)) (propagated-inputs `(("python-async-generator" ,python-async-generator) ("python-jupyter-client" ,python-jupyter-client) ("python-nbformat" ,python-nbformat) ("python-nest-asyncio" ,python-nest-asyncio) ("python-traitlets" ,python-traitlets))) (native-inputs `(("python-black" ,python-black) ("python-bumpversion" ,python-bumpversion) ("python-check-manifest" ,python-check-manifest) ("python-codecov" ,python-codecov) ("python-coverage" ,python-coverage) ("python-flake8" ,python-flake8) ;; ("python-ipykernel" ,python-ipykernel) ;; ("python-ipython" ,python-ipython) ;; ("python-ipywidgets" ,python-ipywidgets) ("python-mypy" ,python-mypy) ("python-pip" ,python-pip) ("python-pytest" ,python-pytest) ("python-pytest-cov" ,python-pytest-cov) ("python-setuptools" ,python-setuptools) ("python-testpath" ,python-testpath) ("python-tox" ,python-tox) ("python-twine" ,python-twine) ("python-wheel" ,python-wheel) ("python-xmltodict" ,python-xmltodict))) (home-page "https://jupyter.org") (synopsis "Client library for executing notebooks") (description "This package provides a client library for executing notebooks. Formerly nbconvert's @code{ExecutePreprocessor.}") (license license:bsd-3))) (define-public repo2docker (package (name "repo2docker") (version "2021.03.0") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/jupyterhub/repo2docker/") (commit "2021.03.0"))) (file-name (git-file-name name version)) (sha256 (base32 "18w8rgf7fpf79kx36y2c3xi3d52i41z112l3sz719d8kg0bir16m")))) (outputs '("out" "doc")) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (add-after 'patch-shebangs 'fix-install-miniforge (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out"))) (substitute* (find-files out "^(install-miniforge|install-nix|\ nix-shell-wrapper|repo2docker-entrypoint)") (("^#!(.*)/bin/bash") "#!/bin/bash")) (substitute* (find-files out "^freeze\\.py$") (("^#!(.*)/bin/python3") "#!/bin/python3\n"))))) (add-after 'install 'make-doc (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "doc")) (doc (string-append out "/share/doc/" ,name))) (setenv "PYTHONPATH" (string-append (getcwd) ":" (getenv "PYTHONPATH"))) (with-directory-excursion "docs" (invoke "make" "html") (copy-recursively "build/html" (string-append doc "/html"))))))))) (inputs `(("python-traitlets" ,python-traitlets) ("python-toml" ,python-toml) ("python-semver" ,python-semver) ("python-ruamel.yaml" ,python-ruamel.yaml) ("python-requests" ,python-requests) ("python-json-logger" ,python-json-logger) ("python-jinja2" ,python-jinja2) ("python-escapism" ,python-escapism) ("python-docker" ,python-docker))) (native-inputs `(("python-sphinx" ,python-sphinx) ("python-recommonmark" ,python-recommonmark) ("python-sphinxcontrib-autoprogram" ,python-sphinxcontrib-autoprogram) ("python-pydata-sphinx-theme" ,python-pydata-sphinx-theme))) (home-page "https://repo2docker.readthedocs.io/en/latest/index.html#") (synopsis "Generate docker images from repositories") (description "repo2docker fetches a repository (from GitHub, GitLab, Zenodo, Figshare, Dataverse installations, a Git repository or a local directory) and builds a container image in which the code can be executed. The image build process is based on the configuration files found in the repository. repo2docker can be used to explore a repository locally by building and executing the constructed image of the repository, or as a means of building images that are pushed to a Docker registry.") (license license:bsd-3))) (define-public python-bash-kernel (package (name "python-bash-kernel") (version "0.7.2") (source (origin (method url-fetch) (uri (pypi-uri "bash_kernel" version)) (sha256 (base32 "0w0nbr3iqqsgpk83rgd0f5b02462bkyj2n0h6i9dwyc1vpnq9350")))) (build-system python-build-system) (arguments `(#:tests? #f #:phases (modify-phases %standard-phases (add-after 'unpack 'bash-references (lambda* (#:key inputs #:allow-other-keys) (substitute* "bash_kernel/kernel.py" (("\"bash\"") (string-append "\"" (assoc-ref inputs "bash") "/bin/bash\"")) (("\\['bash', ") (string-append "['" (assoc-ref inputs "bash") "/bin/bash', "))) #t)) (add-after 'install 'install-kernelspec (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (setenv "HOME" "/tmp") (invoke "python" "-m" "bash_kernel.install" "--prefix" out) #t)))))) (inputs `(("bash" ,bash))) (propagated-inputs `(("python-pexpect" ,python-pexpect) ("python-ipykernel" ,python-ipykernel) ("python-jupyter-client" ,python-jupyter-client))) (home-page "https://github.com/takluyver/bash_kernel") (synopsis "Jupyter kernel for Bash") (description "A bash shell kernel for Jupyter.") (license license:expat))) (define-public python-sparqlkernel (package (name "python-sparqlkernel") (version "1.3.0") (source (origin (method url-fetch) (uri (pypi-uri "sparqlkernel" version)) (sha256 (base32 "004v22nyi5cnpxq4fiws89p7i5wcnzv45n3n70axdd6prh6rkapx")))) (build-system python-build-system) (arguments `(#:tests? #f #:phases (modify-phases %standard-phases (add-after 'unpack 'no-custom-css (lambda* (#:key inputs #:allow-other-keys) (substitute* "sparqlkernel/install.py" (("install_custom_css\\( destd, PKGNAME \\)") "")) #t)) (add-after 'install 'install-kernelspec (lambda* (#:key inputs outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (setenv "HOME" "/tmp") (add-installed-pythonpath inputs outputs) (invoke (string-append out "/bin/jupyter-sparqlkernel") "install" (string-append "--InstallKernelSpec.prefix=" out)) #t)))))) (native-inputs `(("python-traitlets" ,python-traitlets) ("python-jupyter-client" ,python-jupyter-client) ("python-notebook" ,python-notebook) ("python-ipykernel" ,python-ipykernel) ("python-html5lib" ,python-html5lib-0.9))) (propagated-inputs `(("python-sparqlwrapper" ,python-sparqlwrapper) ("python-pygments" ,python-pygments))) (home-page "https://github.com/paulovn/sparql-kernel") (synopsis "Jupyter kernel for SPARQL") (description "This module installs a Jupyter kernel for SPARQL. It allows sending queries to an SPARQL endpoint and fetching & presenting the results in a notebook.") (license license:bsd-3))) (define-public python-voila (package (name "python-voila") (version "0.2.10") (source (origin (method url-fetch) (uri (pypi-uri "voila" version)) (sha256 (base32 "0krfc95yjlhjdmrsladhy6lpf4xs1zw49nmkyl4pkykndglvwa1m")))) (build-system python-build-system) (propagated-inputs `(("python-jupyter-client" ,python-jupyter-client) ("python-jupyter-server" ,python-jupyter-server) ("python-nbclient" ,python-nbclient) ("python-nbconvert" ,python-nbconvert))) (native-inputs `(("python-ipywidgets" ,python-ipywidgets) ("python-jupyter-packaging" ,python-jupyter-packaging) ("python-matplotlib" ,python-matplotlib) ("python-mock" ,python-mock) ("python-pytest" ,python-pytest) ("python-pytest-tornasync" ,python-pytest-tornasync) ("python-setuptools" ,python-setuptools) ("python-tornado" ,python-tornado-6))) (home-page "https://github.com/voila-dashboards/voila") (synopsis "Render live Jupyter notebooks with interactive widgets") (description "Voilà turns Jupyter notebooks into standalone web applications. Unlike the usual HTML-converted notebooks, each user connecting to the Voilà tornado application gets a dedicated Jupyter kernel which can execute the callbacks to changes in Jupyter interactive widgets.") (license license:bsd-3)))