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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu services science)
  #:export (<rshiny-configuration>
            rshiny-configuration
            rshiny-configuration?
            rshiny-configuration-package
            rshiny-configuration-binary
            rshiny-shepherd-service
            rshiny-service-type))

(use-modules (gnu)
             (guix records)
             (ice-9 match))
(use-service-modules shepherd)
(use-package-modules cran)

(define-record-type* <rshiny-configuration>
  rshiny-configuration
  make-rshiny-configuration
  rshiny-configuration?
  (package          rshiny-configuration-package    ; package
                    (default r-shiny))
  (binary           rshiny-configuration-binary     ; string
                    (default "rshiny")))

(define rshiny-shepherd-service
  (match-lambda
    (($ <rshiny-configuration> package binary)
     (list
       (shepherd-service
         (documentation (string-append "R-Shiny service for " binary))
         (provision (list (symbol-append 'rshiny- (string->symbol
                                                    (string-take binary 9)))))
         (requirement '(networking))
         (start
           #~(exec-command
               (list
                 #$(string-append "/run/current-system/profile/bin/" binary))
               ;#:log-file #$(string-append "/var/log/" binary ".log") ; kills shepherd
               #:environment-variables
               (list "R_LIBS_USER=/run/current-system/profile/site-library/")))
         (stop #~(make-kill-destructor)))))))

(define rshiny-service-type
  (service-type
    (name 'rshiny)
    (extensions
      (list
        (service-extension shepherd-root-service-type
                           rshiny-shepherd-service)
        (service-extension profile-service-type
                           ;; We want the package installed so that it
                           ;; pulls in the propagated inputs as well.
                           (lambda (config)
                             (list
                               (rshiny-configuration-package config))))))
    (description
     "Run an R-Shiny webapp as a Guix Service.")))
c Courtès 2018-06-27doc: Specify Guile-SQLite3 minimum version....* doc/guix.texi (Requirements): Specify the minimum guile-sqlite3 version. * README (Requirements): Likewise. Ludovic Courtès 2018-06-14build: Require Guile-SQLite3....The next commits make (sqlite3) an indirect dependency of (gnu build install), which is itself used by (guix scripts system), hence this new requirement. * configure.ac: Error out when $guix_cv_have_recent_guile_sqlite3 is false. Remove HAVE_GUILE_SQLITE3 Automake conditional. * Makefile.am (MODULES, SCM_TESTS): Remove HAVE_GUILE_SQLITE3 conditions. * doc/guix.texi (Requirements): Add Guile-SQLite3. * README: Ditto. * gnu/packages/package-management.scm (guix)[propagated-inputs]: Add GUILE-SQLITE3. [arguments]: In 'wrap-program' phase, take guile-sqlite3 into account. Ludovic Courtès 2018-02-26build: Require Guile >= 2.0.13....* README, configure.ac, doc/guix.texi (Requirements): Increase minimum Guile version from 2.0.9 to 2.0.13. * config-daemon.ac: Remove use of 'GUIX_CHECK_UNBUFFERED_CBIP'. * m4/guix.m4 (GUIX_CHECK_UNBUFFERED_CBIP): Remove. * guix/build/download.scm (current-http-proxy): Remove. * guix/build/syscalls.scm (%libc-errno-pointer, errno): Remove. (syscall->procedure): Use #:return-errno unconditionally. * guix/hash.scm (open-sha256-input-port)[unbuffered]: Remove outdated comment. * guix/http-client.scm (when-guile<=2.0.5-or-otherwise-broken): Remove. <top level>: Remove 'when-guile<=2.0.5-or-otherwise-broken' block. * guix/scripts/substitute.scm (fetch): Remove 'guile-version>?' conditional. * tests/hash.scm (supports-unbuffered-cbip?): Remove. <top level>: Remove 'test-skip' call. Ludovic Courtès 2018-01-07doc: Mark zlib as mandatory, libbz2 as optional....* doc/guix.texi (Requirements): Move zlib to mandatory and libbz2 to optional. * README: Ditto. Ludovic Courtès 2018-01-01doc: Update requirements in 'README'....* README (Requirements): Update. Mathieu Lirzin 2017-09-25README: Replace http:// with https:// where applicable.Marius Bakke 2017-03-18build: Require Guile >= 2.0.9....* configure.ac: Bump requirement to 2.0.9. * doc/guix.texi (Requirements): Adjust accordingly. * README (Requirements): Likewise. * build-aux/download.scm: Remove workaround for <http://bugs.gnu.org/13095>. * guix/build/download.scm: Likewise. (http-fetch)[post-2.0.7?]: Remove. Remove conditional code for not POST-2.0.7?. * guix/http-client.scm: Remove workaround for <http://bugs.gnu.org/13095>. (http-fetch)[post-2.0.7?]: Remove. Remove conditional code for not POST-2.0.7?. * guix/serialization.scm (read-latin1-string): Remove mention of 2.0.9. * tests/nar.scm: Use (ice-9 control). (let/ec): Remove. Ludovic Courtès 2017-01-30maint: Fix invalid calls to 'info'....* HACKING <Contributing>: Remove name of the manual from the item argument. * README <Installation>: Likewise. Mathieu Lirzin cond '_guix_complete_subcommand' function, shadowing the existing one, which broke sub-command completion for 'guix system', 'guix import', etc. * etc/completion/bash/guix: Distinguish between '_guix_complete_command' and '_guix_complete_subcommand'. Adjust users to call the right one. Ludovic Courtès