blob: 8b22124c35281f07b94dcf8d4bea7b1a781e5724 (
about) (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
|
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2021, 2022 Vinicius Monego <monego@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages orange)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix build-system python)
#:use-module (gnu packages)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages graph)
#:use-module (gnu packages machine-learning)
#:use-module (gnu packages python-build)
#:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-science)
#:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages qt))
(define-public python-orange-canvas-core
(package
(name "python-orange-canvas-core")
(version "0.1.24")
(source
(origin
(method url-fetch)
(uri (pypi-uri "orange-canvas-core" version))
(sha256
(base32 "0m3dszdkc5bc80ahcvrqxz8jahs33js9cx1mc6rc9ihysq2ddnfz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
(lambda _
;; This test fails with: RuntimeError: Event loop is closed.
(substitute* "orangecanvas/application/tests/test_mainwindow.py"
(("test_help_requests") "_test_help_requests"))
(setenv "HOME" "/tmp")
(setenv "QT_QPA_PLATFORM" "offscreen"))))))
(propagated-inputs
(list python-anyqt
python-cachecontrol
python-commonmark
python-dictdiffer
python-docutils
python-qasync
python-requests))
(home-page "https://github.com/biolab/orange-canvas-core")
(synopsis "Core component of Orange Canvas")
(description
"Orange Canvas Core is a framework for building graphical user interfaces
for editing workflows. It is a component used to build the Orange Canvas
data-mining application.")
(license license:gpl3)))
(define-public python-orange-widget-base
(package
(name "python-orange-widget-base")
(version "4.16.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "orange-widget-base" version))
(sha256
(base32 "0a0sijsvzijj71sxq8ckpgz59z1cq9sxn4fya3z23ibdzjzwrsi7"))))
(build-system python-build-system)
(arguments
`(;; unittest fails to load one test, all other tests are passing:
;; AttributeError: module 'orangewidget' has no attribute 'version'.
#:tests? #f
#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
(lambda _
(setenv "HOME" "/tmp")
(setenv "QT_QPA_PLATFORM" "offscreen"))))))
(propagated-inputs
(list python-anyqt python-matplotlib python-orange-canvas-core
python-pyqtgraph python-typing-extensions))
(home-page "https://github.com/biolab/orange-widget-base")
(synopsis "Base Widget for Orange Canvas")
(description
"Orange Widget Base provides a base widget component for a interactive
GUI based workflow. It is primarily used in the Orange framework.")
(license license:gpl3+)))
(define-public orange
(package
(name "orange")
(version "3.32.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Orange3" version))
(sha256
(base32 "0pxjwisc209cdgpqlqazc2vlmr0iqz8ry862w7jx95zic54d9p5l"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'preparations
(lambda _
;; Delete test that opens an outgoing connection.
(delete-file "Orange/tests/test_url_reader.py")
;; This is a binary data file and it breaks runpath validation.
(delete-file "Orange/tests/datasets/binary-blob.tab")
;; Skip the test which uses that binary file.
(substitute* "Orange/tests/test_txt_reader.py"
(("test_read_nonutf8_encoding") "_test_read_nonutf8_encoding"))
;; We use a correct version of PyQtWebEngine, but the build scripts
;; consider it incorrect anyways. Remove the constraint entirely to
;; work around this bug.
(substitute* "requirements-pyqt.txt" (("PyQtWebEngine>=5.12") ""))))
(add-before 'check 'pre-check
;; Tests need a writable home.
(lambda _
(setenv "HOME" "/tmp")
(setenv "QT_QPA_PLATFORM" "offscreen")))
(add-after 'install 'wrap-executable
;; Ensure that icons are found at runtime.
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(wrap-program (string-append out "/bin/orange-canvas")
`("QT_PLUGIN_PATH" prefix
,(list (string-append (assoc-ref inputs "qtsvg")
"/lib/qt5/plugins/"))))))))))
(native-inputs
(list python-cython))
(inputs
(list python-anyqt
python-baycomp
python-bottleneck
python-chardet
python-httpx
python-joblib
python-keyring
python-keyrings.alt
python-louvain
python-matplotlib
python-networkx
python-numpy
python-openpyxl
python-opentsne
python-orange-canvas-core
python-orange-widget-base
python-pandas
python-pygments
python-pyqt
python-pyqtgraph
python-pyqtwebengine
python-pyyaml
python-qtconsole
python-requests
python-scikit-learn
python-scipy
python-serverfiles
python-xlrd
python-xlsxwriter
qtbase-5
qtsvg-5
xdg-utils))
(home-page "https://orangedatamining.com/")
(synopsis "Component-based data mining framework")
(description
"Orange is a component-based, graphical framework for machine learning,
data analysis, data mining and data visualization.")
(license license:gpl3+)))
(define-public python-serverfiles
(package
(name "python-serverfiles")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "serverfiles" version))
(sha256
(base32 "1qgbzgnaxj4wsp2rdas53qxsh0j7xpibq25w6lviwyaqwwrgq42y"))))
(build-system python-build-system)
(propagated-inputs
(list python-requests))
(home-page "https://github.com/biolab/serverfiles")
(synopsis "Utility to access files on a HTTP server and store them locally")
(description
"This package provides an utility that accesses files on a HTTP server
and stores them locally for reuse. It is primarily used by the Orange
framework.")
(license license:gpl3+)))
|
