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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu packages boost)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix packages)
  #:use-module (guix download)
  #:use-module (guix build-system gnu)
  #:use-module (gnu packages)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages python)
  #:use-module (gnu packages tcsh)
  #:use-module (gnu packages perl))

(define-public boost
  (package
    (name "boost")
    (version "1.60.0")
    (source (origin
              (method url-fetch)
              (uri (string-append
                    "mirror://sourceforge/boost/boost_"
                    (string-map (lambda (x) (if (eq? x #\.) #\_ x)) version)
                    ".tar.bz2"))
              (sha256
               (base32
                "0fzx6dwqbrkd4bcd8pjv0fpapwmrxxwr8yx9g67lihlsk3zzysk8"))))
    (build-system gnu-build-system)
    (inputs `(("zlib" ,zlib)))
    (native-inputs
     `(("perl" ,perl)
       ("python" ,python-2)
       ("tcsh" ,tcsh)))
    (arguments
     (let ((build-flags
            `("threading=multi" "link=shared"

              ;; Set the RUNPATH to $libdir so that the libs find each other.
              (string-append "linkflags=-Wl,-rpath="
                             (assoc-ref outputs "out") "/lib")

              ;; Boost's 'context' library is not yet supported on mips64, so
              ;; we disable it.  The 'coroutine' library depends on 'context',
              ;; so we disable that too.
              ,@(if (string-prefix? "mips64" (or (%current-target-system)
                                                 (%current-system)))
                    '("--without-context"
                      "--without-coroutine" "--without-coroutine2")
                    '()))))
       `(#:tests? #f
         #:phases
         (modify-phases %standard-phases
           (replace
            'configure
            (lambda* (#:key outputs #:allow-other-keys)
              (let ((out (assoc-ref outputs "out")))
                (substitute* '("libs/config/configure"
                               "libs/spirit/classic/phoenix/test/runtest.sh"
                               "tools/build/doc/bjam.qbk"
                               "tools/build/src/engine/execunix.c"
                               "tools/build/src/engine/Jambase"
                               "tools/build/src/engine/jambase.c")
                  (("/bin/sh") (which "sh")))

                (setenv "SHELL" (which "sh"))
                (setenv "CONFIG_SHELL" (which "sh"))

                (zero? (system* "./bootstrap.sh"
                                (string-append "--prefix=" out)
                                "--with-toolset=gcc")))))
           (replace
            'build
            (lambda* (#:key outputs #:allow-other-keys)
              (zero? (system* "./b2" ,@build-flags))))
           (replace
            'install
            (lambda* (#:key outputs #:allow-other-keys)
              (zero? (system* "./b2" "install" ,@build-flags))))))))

    (home-page "http://boost.org")
    (synopsis "Peer-reviewed portable C++ source libraries")
    (description
     "A collection of libraries intended to be widely useful, and usable
across a broad spectrum of applications.")
    (license (license:x11-style "http://www.boost.org/LICENSE_1_0.txt"
                                "Some components have other similar licences."))))

(define-public mdds
  (package
    (name "mdds")
    (version "0.12.1")
    (source (origin
             (method url-fetch)
             (uri (string-append
                   "http://kohei.us/files/mdds/src/mdds_" version ".tar.bz2"))
             (sha256
              (base32
               "0gg8mb9kxh3wggh7njj1gf90xy27p0yq2cw88wqar9hhg2fmwmi3"))))
    (build-system gnu-build-system)
    (propagated-inputs
      `(("boost" ,boost))) ; inclusion of header files
    (home-page "https://code.google.com/p/multidimalgorithm/")
    (synopsis "Multi-dimensional C++ data structures and indexing algorithms")
    (description "Mdds (multi-dimensional data structure) provides a
collection of multi-dimensional data structures and indexing algorithms
for C++.  It includes flat segment trees, segment trees, rectangle sets,
point quad trees, multi-type vectors and multi-type matrices.")
    (license license:expat)))
Marius Bakke 2019-12-12gnu: nss: Ungraft....* gnu/packages/nss.scm (nss)[replacement]: Remove field. [source]: Add patch. (nss/fixed): Remove variable. Efraim Flashner 2019-12-11gnu: nss: Remove replacement package....The merge preceding this commit ignored the 'replacement' added to nss in commit 04b33ce205f38813b4dbd04b6ad3c7aa0be0b6f6, because the security fix is already present in NSS 3.48. This commit removes the remaining bits. * gnu/packages/patches/nss-CVE-2019-11745.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/nss.scm (nss/fixed): Remove variable. Marius Bakke 2019-12-11Merge branch 'master' into stagingMarius Bakke 2019-12-11gnu: nss: Fix CVE-2019-11745 via graft....* gnu/packages/patches/nss-CVE-2019-11745.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/nss.scm (nss/fixed): New variable. (nss)[replacement]: Add field. Mark H Weaver 2019-12-11gnu: nss: Update to 3.48....* gnu/packages/nss.scm (nss): Update to 3.48. Marius Bakke 2019-12-11gnu: nspr: Update to 4.24....* gnu/packages/nss.scm (nspr): Update to 4.24. Marius Bakke 2019-10-08gnu: nss, nss-certs: Update to 3.46.1....* gnu/packages/nss.scm (nss): Update to 3.46.1. * gnu/packages/certs.scm (nss-certs): Likewise. Marius Bakke 2019-10-08gnu: nspr: Update to 4.22....* gnu/packages/nss.scm (nspr): Update to 4.22. Marius Bakke 2019-08-06gnu: nss: Fix build failure on armhf-linux....Fixes <https://bugs.gnu.org/36930>. * gnu/packages/patches/nss-freebl-stubs.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/nss.scm (nss)[source](patches): Add it. Marius Bakke 2019-08-04gnu: nss, nss-certs: Update to 3.45....* gnu/packages/certs.scm (nss-certs): Update to 3.45. * gnu/packages/nss.scm (nss): Likewise. Marius Bakke 2019-06-29gnu: nss, nss-certs: Update to 3.44.1....* gnu/packages/certs.scm (nss-certs): Update to 3.44.1. * gnu/packages/nss.scm (nss): Likewise. Marius Bakke 2019-05-24gnu: nss, nss-certs: Update to 3.44....* gnu/packages/nss.scm (nss): Update to 3.44. * gnu/packages/certs.scm (nss-certs): Likewise. Marius Bakke