aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages/bioconductor.scm
blob: 4d4cc704bb218ecae0fa425fdb5d57208f1eda2a (about) (plain)
blob size (838KB) exceeds display size limit (100KB).
nvokation to override the user defined in the OCI image. The user from the host system is incorrectly passed to docker run command, this patches reverts the incorrect behavior and passes the correct container-user field value. * gnu/services/docker.scm (oci-container-configuration): Fix the user passed to the docker run invokation. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Giacomo Leidi 2023-11-23services: Add oci-container-service-type....* gnu/services/docker.scm (oci-container-configuration): New variable; (oci-container-shepherd-service): new variable; (oci-container-service-type): new variable. * doc/guix.texi (Miscellaneous Services): Document it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I17cede1975051a9fdd0e0a13b2191d8055266f80 Giacomo Leidi 2023-08-08file-systems: Use cgroups v2....cgroup v2 is the next generation of the control groups API. This patch replaces the cgroup v1 file systems with the unified cgroup v2 file system. cgroup v2 allows for things like containerd/podman to run rootless containers and opens guix system up to running things like Kubernetes. Thanks to Hilton Chain <hako@ultrarare.space> for suggesting the Docker service change. * gnu/system/file-systems.scm (%control-groups): Change to a single "cgroup2" mount point. * gnu/services/docker.scm (docker-shepherd-service): Trim 'requirement' field accordingly. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Sam Lockart 2022-07-13services: docker: Fix race condition....Fixes <https://issues.guix.gnu.org/38432>. * gnu/packages/patches/containerd-create-pid-file.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/docker.scm (containerd)[source]: Add this patch. * gnu/services/docker.scm (containerd-shepherd-service): Add #:pid-file and #:pid-file-timeout. * gnu/services/docker.scm (docker-shepherd-service): Add --containerd flag. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Oleg Pykhalov 2021-11-30services: Accept <inferior-package>s in lieu of <package>s....* gnu/services/authentication.scm (fprintd-configuration) (nslcd-configuration): Substitute file-like objects for package ones. * gnu/services/cgit.scm (cgit-configuration, opaque-cgit-configuration): Likewise. * gnu/services/cups.scm (package-list?, cups-configuration): Likewise. * gnu/services/dns.scm (verify-knot-configuration) (ddclient-configuration): Likewise. * gnu/services/docker.scm (docker-configuration): Likewise. * gnu/services/file-sharing.scm (transmission-daemon-configuration): Likewise. * gnu/services/getmail.scm (getmail-configuration): Likewise. * gnu/services/mail.scm (dovecot-configuration) (opaque-dovecot-configuration): Likewise. * gnu/services/messaging.scm (prosody-configuration) (opaque-prosody-configuration): Likewise. * gnu/services/monitoring.scm (zabbix-server-configuration) (zabbix-agent-configuration): Likewise. * gnu/services/networking.scm (opendht-configuration): Likewise. * gnu/services/pm.scm (tlp-configuration): Likewise. * gnu/services/telephony.scm (jami-configuration): Likewise. * gnu/services/virtualization.scm (libvirt-configuration) (qemu-guest-agent-configuration): Likewise. * gnu/services/vpn.scm (openvpn-client-configuration): Likewise. Tobias Geerinckx-Rice 2021-11-17services: docker: Add 'environment-variables' configuration field....* gnu/services/docker.scm (docker-configuration): Add the field (docker-shepherd-service): Pass the list of defined variables to make-forkexec-constructor. * doc/guix.texi (Miscellaneous Services): Update doc. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alexey Abramov