Age | Commit message (Expand) | Author |
2019-02-12 | gnu: Docker: Update to 18.09.2....* gnu/packages/docker.scm (%docker-version, docker, docker-cli): Update to
18.09.2.
(docker)[arguments]: Adjust to the Debian-specific 'iptables-legacy' lookup in
the 'patch-paths' phase.
| Leo Famulari |
2019-02-12 | gnu: runc: Update to 1.0.0-rc6 [fixes CVE-2019-5736]....* gnu/packages/virtualization.scm (runc): Update to 1.0.0-rc6.
[source]: Use a descriptive file-name. Add 'runc-CVE-2019-5736.patch'
* gnu/packages/patches/runc-CVE-2019-5736.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
| Leo Famulari |
2019-02-12 | gnu: lzlib: Remove minilzip comment....It lacks lzip's dependency on libstdc++.so and libm.so and may have its
uses.
* gnu/packages/compression.scm (lzlib): Don't judge.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lzlib: Update to 1.11....* gnu/packages/compression.scm (lzlib): Update to 1.11.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lzlib: Don't use NAME in source URI....* gnu/packages/compression.scm (lzlib)[source]: Hard-code NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: clzip: Update to 1.11....* gnu/packages/compression.scm (clzip): Update to 1.11.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: clzip: Don't use NAME in source URI....* gnu/packages/compression.scm (clzip)[source]: Hard-code NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lunzip: Update to 1.11....* gnu/packages/compression.scm (lunzip): Update to 1.11.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lunzip: Don't use NAME in source URI....* gnu/packages/compression.scm (lunzip)[source]: Hard-code NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: plzip: Update to 1.8....* gnu/packages/compression.scm (plzip): Update to 1.8.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: plzip: Don't use NAME in source URI....* gnu/packages/compression.scm (plzip)[source]: Hard-code NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lziprecover: Update to 1.21....* gnu/packages/compression.scm (lziprecover): Update to 1.21.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: lziprecover: Don't use NAME in source URI....* gnu/packages/compression.scm (lziprecover)[source]: Hard-code NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: perl-dbi: Update to 1.642....* gnu/packages/databases.scm (perl-dbi): Update to 1.642.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: kyotocabinet: Update to 1.2.77....* gnu/packages/databases.scm (kyotocabinet): Update to 1.2.77.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: os-prober: Update to 1.77....* gnu/packages/bootloaders.scm (os-prober): Update to 1.77.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: feh: Update to 3.1.2....* gnu/packages/image-viewers.scm (feh): Update to 3.1.2.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: python-pybedtools: Update to 0.8.0 and fix build....From 40db2b4eae5ca61a3134cdaf7b156ed1ae9f7415 Mon Sep 17 00:00:00 2001
From: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Date: Sun, 10 Feb 2019 23:39:25 -0500
Subject: [PATCH] gnu: python-pybedtools: Update to 0.8.0 and fix build.
* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.8.0.
[phases]{disable-broken-tests}: Do not disable "test_issue_157" and
"test_to_dataframe" tests. Disable the "test_getting_example_beds".
{remove-cython-generated-files}: Add phase.
{generate-cython-extensions}: Add phase.
{check}: Move from python2-pybedtools to here. Add a scripts
subdirectory of the build directory to the PATH, so that the tests can call
them. Invoke pytest rather than nosetests.
[modules]: Move from python2-pybedtools to here.
[propagated-inputs]: Depend on the current BEDTOOLS rather than version 1.26.
[native-inputs]: Replace python-nose by python-pytest and add python-psutil.
| Maxim Cournoyer |
2019-02-12 | gnu: efilinux: Set ARCH variable on some architectures....Even with this patch efilinux does not build for arm*.
* gnu/packages/efi.scm (efilinux)[arguments]: On armhf-linux and
aarch64-linux set the ARCH variable apropriately.
| Efraim Flashner |
2019-02-12 | gnu: Add cnvkit....* gnu/packages/bioinformatics.scm (cnvkit): New variable.
| Ricardo Wurmus |
2019-02-12 | gnu: Add r-dnacopy....* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
| Ricardo Wurmus |
2019-02-12 | gnu: python-reportlab: Update to 3.5.13....* gnu/packages/pdf.scm (python-reportlab): Update to 3.5.13.
[inputs]: Add freetype.
| Ricardo Wurmus |
2019-02-12 | gnu: glibc@2.27: fix CVE-2018-11236, CVE-2018-11237....* gnu/packages/base.scm (glibc@2.27)[sources]: Add patches.
[properties]: New field, mark CVE-2017-18269 fixed.
* gnu/packages/patches/glibc-CVE-2018-11236.patch,
gnu/packages/patches/glibc-CVE-2018-11237.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
| Efraim Flashner |
2019-02-12 | gnu: parallel: Update to 20190122....* gnu/packages/parallel.scm (parallel): Update to 20190122.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: maven-resolver-api: Don't use unstable tarball....* gnu/packages/maven.scm (maven-resolver-api)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: multipath-tools: Update to 0.7.9....* gnu/packages/linux.scm (multipath-tools): Update to 0.7.9.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: websockify: Don't use unstable tarball....* gnu/packages/web.scm (websockify)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: libyajl: Don't use unstable tarball....* gnu/packages/web.scm (libyajl)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: rapidjson: Don't use unstable tarball....* gnu/packages/web.scm (rapidjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: qjson: Don't use unstable tarball....* gnu/packages/web.scm (qjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: fcgiwrap: Don't use unstable tarball....* gnu/packages/web.scm (fcgiwrap)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-12 | gnu: mod-wsgi: Don't use unstable tarball....* gnu/packages/web.scm (mod-wsgi)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
| Tobias Geerinckx-Rice |
2019-02-11 | gnu: Guix: Update snapshot to 0.16.0-10.2637cfd....Fixes <https://bugs.gnu.org/34444>.
* gnu/packages/package-management.scm (guix): Update to 0.16.0-10.2637cfd.
| Leo Famulari |
2019-02-11 | pack, vm: Fix incorrect use of 'package-transitive-propagated-inputs'....In practice the error was not triggered because
'package-transitive-propagated-inputs' currently returns the empty list
for these two packages.
* guix/scripts/pack.scm (gcrypt-sqlite3&co): Remove labels from the
result.
* gnu/system/vm.scm (gcrypt-sqlite3&co): Likewise.
| Ludovic Courtès |
2019-02-11 | gnu: guile-picture-language: Update to 0-2.1ea8b78....* gnu/packages/guile-xyz.scm (guile-picture-language): Update to 0-2.1ea8b78.
| Ricardo Wurmus |
2019-02-11 | gnu: disorderfs: Update to 0.5.6....* gnu/packages/file-systems (disorderfs): Update to 0.5.6.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Vagrant Cascadian |
2019-02-11 | gnu: diffoscope: Update to 111....* gnu/packages/package-management (diffoscope): Update to 111.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Vagrant Cascadian |
2019-02-11 | gnu: python-cython: Update to 0.29.5....* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.5.
| Andreas Enge |
2019-02-11 | gnu: pixman: Update source URI....* gnu/packages/xdisorg.scm (pixman)[source](uri): Use HTTPS.
| Marius Bakke |
2019-02-11 | gnu: python-django: Update to 1.11.20 [fixes CVE-2019-6975]....* gnu/packages/django.scm (python-django): Update to 1.11.20.
| Marius Bakke |
2019-02-11 | gnu: ffmpeg: Update to 4.1.1....* gnu/packages/video.scm (ffmpeg): Update to 4.1.1.
| Marius Bakke |
2019-02-11 | gnu: miniupnpc: Update to 2.1.20190210....* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190210.
| Marius Bakke |
2019-02-11 | gnu: lv2: Update to 1.16.0....* gnu/packages/audio.scm (lv2): Update to 1.16.0.
[arguments]: Remove #:python.
(lv2-devel): Remove variable.
* gnu/packages/music.scm (ingen)[inputs]: Change LV2-DEVEL to LV2.
| Marius Bakke |
2019-02-11 | gnu: vlc: Use libvpx-1.7....Fixes <https://bugs.gnu.org/34439>.
* gnu/packages/video.scm (vlc)[inputs]: Remove libvpx. Add libvpx-1.7.
| Danny Milosavljevic |
2019-02-11 | services: docker: Make shepherd service also require "dbus-system",..."elogind" and "udev".
Fixes <https://bugs.gnu.org/34333>.
* gnu/services/docker.scm (docker-shepherd-service): Require "dbus-system",
"elogind" and "udev".
| Danny Milosavljevic |
2019-02-11 | gnu: gama: Update to 2.03....* gnu/packages/gps.scm (gama): Update to 2.03.
| Kei Kebreau |
2019-02-11 | services: docker: Make shepherd service require "networking"....Fixes <https://bugs.gnu.org/34333>.
* gnu/services/docker.scm (docker-shepherd-service): Require "networking".
| Danny Milosavljevic |
2019-02-11 | gnu: gloox: Update to 1.0.22....* gnu/packages/messaging.scm (gloox): Update to 1.0.22.
| Vagrant Cascadian |
2019-02-11 | gnu: python-ecpy: Update to 0.10.0....* gnu/packages/python-crypto.scm (python-ecpy): Update to 0.10.0.
| Vagrant Cascadian |
2019-02-11 | gnu: python-pycryptodome: Update to 3.7.3....* gnu/packages/python-crypto (python-cryptodome): Update to 3.7.3.
| Vagrant Cascadian |