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2023-12-15gnu: r-interactivedisplay: Add missing input....* gnu/packages/bioconductor.scm (r-interactivedisplay)[propagated-inputs]: Add r-biocmanager. Change-Id: I7e29c28202496ba58ec35adf03b77ac84691e492 Ricardo Wurmus
2023-12-15gnu: r-dt: Update to 0.31....* gnu/packages/statistics.scm (r-dt): Update to 0.31. [source]: Simplify by using git repositories for extensions instead of fetching every file from the datatables CDN. [native-inputs]: Update to datatables-plugins 1.13.6. Change-Id: Ibebd2ae1f3b4d51739b756ad808bebf2663e1009 Ricardo Wurmus
2023-12-15gnu: r-interactivedisplay: Add missing JavaScript sources....* gnu/packages/bioconductor.scm (r-interactivedisplay)[source]: Update list of minified JavaScript files to delete. [arguments]: Use minify-build-system to process JavaScript files. [native-inputs]: Add js-d3-v2; relabel js-datatables as js-datatables-1.10; add js-datatables-1.9. Change-Id: If8b6d9378680e9f69d71be56ce28add70b1a4564 Ricardo Wurmus
2023-12-15gnu: r-bookdown: Update to 0.37....* gnu/packages/cran.scm (r-bookdown): Update to 0.37. [arguments]: Use minify-build-system to process JavaScript. Change-Id: I53ff5ef1527976e40e7caf8b34f77af7eb3e833f Ricardo Wurmus
2023-12-15gnu: r-crosstalk: Update to 1.2.1....* gnu/packages/cran.scm (r-crosstalk): Update to 1.2.1. [source]: Add snippet to delete bundled minified JavaScript. [arguments]: Use minify-build-system to minify JavaScript files from source; add phase 'replace-bundled-minified-JavaScript. [native-inputs]: Add esbuild and js-selectize. Change-Id: I2a4a773d5f40a8f27e594e2f1b627624cab8755e Ricardo Wurmus
2023-12-15gnu: Add js-datatables-1.9....* gnu/packages/javascript.scm (js-datatables-1.9): New variable. Change-Id: I9b022e12119247c8385ebbcec07f54c4106155df Ricardo Wurmus
2023-12-15gnu: r-bslib: Update to 0.6.1....* gnu/packages/cran.scm (r-bslib): Update to 0.6.1. [source]: Update list of minified JavaScript to delete. [arguments]: Use minify-build-system; update process-javascript phase. [propagated-inputs]: Add r-lifecycle. [native-inputs]: Remove typescript-components; update js-bootstrap5-bundle. Change-Id: I0aeae3f11a35211e6b429461042dbce2eca85313 Ricardo Wurmus
2023-12-15gnu: r-pkgbuild: Update to 1.4.3....* gnu/packages/cran.scm (r-pkgbuild): Update to 1.4.3. [propagated-inputs]: Remove r-crayon, r-prettyunits, and r-rprojroot. Change-Id: I0b83188e69aae19ddc62d71da18358777ed9c454 Ricardo Wurmus
2023-12-15gnu: r-wgcna: Update to 1.72-5....* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-5. Change-Id: Ib9d3b0e6ba191839e4b22cb0b8f63e6b0e9d2baa Ricardo Wurmus
2023-12-15gnu: r-spacetime: Update to 1.3-1....* gnu/packages/cran.scm (r-spacetime): Update to 1.3-1. Change-Id: I1fe54f97452c0dd738c6cfced56c406498de73c4 Ricardo Wurmus
2023-12-15gnu: r-openmx: Update to 2.21.11....* gnu/packages/cran.scm (r-openmx): Update to 2.21.11. Change-Id: I1349e0965508f42d183d2e705c356fdd3ac9faf0 Ricardo Wurmus
2023-12-15gnu: r-spacyr: Update to 1.3.0....* gnu/packages/cran.scm (r-spacyr): Update to 1.3.0. [native-inputs]: Add r-r-rsp. Change-Id: I999db8ad92b2d0799ffa4350847980db30c75409 Ricardo Wurmus
2023-12-15gnu: r-scales: Update to 1.3.0....* gnu/packages/cran.scm (r-scales): Update to 1.3.0. [propagated-inputs]: Add r-cli and r-glue. Change-Id: I37c4a09d6910f9d8885d253547808d3dc2761748 Ricardo Wurmus
2023-12-15gnu: r-pbdmpi: Update to 0.5-1....* gnu/packages/cran.scm (r-pbdmpi): Update to 0.5-1. Change-Id: Iede248c40a0a57bc5a23015745f426cd4485b38c Ricardo Wurmus
2023-12-15gnu: r-rjava: Update to 1.0-10....* gnu/packages/cran.scm (r-rjava): Update to 1.0-10. [source]: Delete bundled minified JavaScript. [arguments]: Use minify-build-system in new phase 'replace-bundled-minified-JavaScript. [native-inputs]: Add esbuild. Change-Id: I6ca7724ea61f53995067cca8d6835fe061621567 Ricardo Wurmus
2023-12-15gnu: Add alsa-scarlett-gui....* gnu/packages/music.scm (alsa-scarlett-gui): New variable. Change-Id: Ia92a0be7e0f08cf42bc263f2c321b4617fa6935b Ricardo Wurmus
2023-12-15gnu: tascam-gtk: Update to 0.4-0.69fb86f....* gnu/packages/music.scm (tascam-gtk): Update to 0.4-0.69fb86f. [inputs]: Replace libxml++-2 with libxml++-3. Change-Id: Iae8ff22ee7ee5888ff4d24209f2f09fbecf52889 Ricardo Wurmus
2023-12-15gnu: Add libxml++-3....* gnu/packages/gnome.scm (libxml++-3): New variable. Change-Id: I2250766126f433b3f5dcc50cd7eaadec3acadad3 Ricardo Wurmus
2023-12-15gnu: dezyne: Update to 2.18.0....* gnu/packages/dezyne.scm (dezyne): Update to 2.18.0. [inputs]: Add boost. [arguments]: Change assoc-ref memes to use gexps. Change-Id: I1212de52db6c2b07122e756c68597b1f8ddbb313 Janneke Nieuwenhuizen
2023-12-15gnu: Add scmackerel....* gnu/packages/dezyne.scm (scmackerel): New variable. Janneke Nieuwenhuizen
2023-12-14services: Add rspamd-service-type....* gnu/services/mail.scm (rspamd-service-type): New variable. * gnu/tests/mail.scm (%test-rspamd): New variable. * doc/guix.texi: Document it. Co-authored-by: Saku Laesvuori <saku@laesvuori.fi> Change-Id: I7196643f087ffe9fc91aab231b69d5ed8dc9d198 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Ieong
2023-12-14gnu: pypy: Update to 7.3.13....The validate-runpath error was previously reported in #57653. Version update fixes the existing build errors. * gnu/packages/python.scm (pypy3): Update to 7.3.13. [source]: Update origin URI. [arguments]<#:validate-runpath>: Disable check. [arguments]<#:phases>: Update directory paths. Change-Id: Ic6ab7dd77e30fa85d6fa5f000f9aa2528951b81e Co-authored-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2023-12-14services: hpcguix-web: Add ‘configuration’ action....* gnu/services/web.scm (hpcguix-web-shepherd-service): Define ‘config-file’ and use it. Add ‘actions’ field. Change-Id: I085df403270039ede3c13f21a5d60682c7510e2e Ludovic Courtès
2023-12-14tests: childhurd: Prefer “-cpu max” over “-cpu host”....“-cpu host” can sometimes, for unclear reasons, lead to this error from QEMU 8.1.1: qemu-system-x86_64: CPU model 'host' requires KVM or HVF This commit fixes it. Inspired by <https://github.com/matthewbauer/nixpkgs/commit/47b56e7c19c2e3af685ee408f02f232efb3d12b1>. * gnu/tests/virtualization.scm (run-childhurd-test)[test]: Prefer “-cpu max” over “-cpu host”. Change-Id: I11a8a68bb0532fe1f3fd2c34b4a7a5fdb7bccb57 Ludovic Courtès
2023-12-14services: guix: Allow gexps evaluating to a list of build-machines....* gnu/services/base.scm (guix-machines-files-installation): Handle machines being a mixed list of build-machines and lists of build-machines. * doc/guix.texi (Base Services): Document it. Change-Id: Ie404562ca0b564413233c3a624046da831893dc3 Co-authored-by: Ludovic Courtès <ludo@gnu.org> Saku Laesvuori
2023-12-14gnu: libtorrent-rasterbar: Disable test_ssl test....It times out in the ci.guix.gnu.org, so this commit disables it. It will be re-enabled once solution is found. * gnu/packages/bittorrent.scm (libtorrent-rasterbar)[arguments]<#:phases>['check]: Disable test_ssl test. Change-Id: Ib396fd8a1786e14baad72ae892bdd0fd3fe7a180 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Tomas Volf
2023-12-14gnu: txr: Remove obsolete fix....* gnu/packages/lisp.scm (txr)[arguments]: Remove 'inhibit-doc-syms-generation' phase. Change-Id: Ibf29e28a82f1821cefbdc87e8bfdf3ffcd4219e5 Guillaume Le Vaillant
2023-12-13gnu: xorg-server: Update to 21.1.10 [security fixes]....Fixes CVE-2023-6377 and CVE-2023-6478. See the X.Org security advisory at <https://lists.x.org/archives/xorg-announce/2023-December/003435.html> for details. * gnu/packages/xorg.scm (xorg-server): Update to 21.1.10. Change-Id: I20ecf1a2b9fc15cafc1c57e0fa726c7cf3096a78 John Kehayias
2023-12-13gnu: racket: Update to 8.11.1....* gnu/packages/patches/racket-backport-8.10-rktboot.patch: Delete file. * gnu/packages/patches/racket-backport-8.11-layered-docs.patch: New file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/racket/scm (%racket-origin)[patches]: Likewise. (%racket-version): Update to 8.11.1. (%zuo-version): Update to 1.7. (racket)[inputs]<deinprogramm, draw, drracket, games, gui, htdp> <parser-tools, plot, rackunit, redex, scribble, slideshow, typed-racket> <srfi, string-constants, syntax-color, web-server, xrepl>: Update hashes. <quickscript>: Likewise, and add snippet. * gnu/packages/chez.scm (chez-scheme-for-racket): Update to 9.9.9-pre-release.18. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Philip McGrath
2023-12-13gnu: hpcguix-web: Update to 0.4.0....* gnu/packages/web.scm (hpcguix-web): Update to 0.4.0. Change-Id: I66a4689d7e3e93ed4085db937920374dbb5a796e Ludovic Courtès
2023-12-13gnu: rust-1.64: Don't make package public....* gnu/packages/rust.scm (rust-1.64): Use define, not define-public. Change-Id: I475e8b1028a716f1d04a4aea5da4d6e7ca2a87d7 Efraim Flashner
2023-12-13Merge branch 'rust-team'...Change-Id: Iee33d7b9067d2180fd4b2e28d81716a251a53a01 Efraim Flashner
2023-12-12gnu: chicken: Update to 5.3.0....* gnu/packages/chicken.scm (chicken): Update to 5.3.0. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Change-Id: Id3ec15da586ddfc6dae924c0c8031fd7a4613660 Daniel Ziltener
2023-12-12gnu: inspectrum: Update to 0.3.1....* gnu/packages/radio.scm (inspectrum): Update to 0.3.1. Change-Id: I51e81e328b332a32e19ab169c602875b21256c4c Guillaume Le Vaillant
2023-12-12gnu: nyxt: Update to 3.10.0....* gnu/packages/web-browsers.scm (nyxt): Update to 3.10.0. [source]: Remove snippet. [inputs]: Remove sbcl-nasdf. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Change-Id: Id131d7168133eb8a31214819c7605d876a1b38f3 Andre A. Gomes
2023-12-12gnu: Add cl-machine-state....* gnu/packages/lisp-xyz.scm (cl-machine-state, ecl-machine-state, sbcl-machine-state): New variables. Change-Id: I48d98dabc2fab1d74bc83857cb750efc29e85ab1 Pierre Neidhardt
2023-12-12Revert "gnu: openssl: Don't error when targeting avr."...This reverts commit baeff7f546d700ae4f0c873bd0fce0ca84bebd21. Efraim Flashner
2023-12-12ci: Don't cross compile to avr....* gnu/ci.scm (cross-jobs)[pointless?]: Don't build any packages for avr. Change-Id: I1728727874d65461b82364e71b70c7d1fd050d90 Efraim Flashner
2023-12-12gnu: sbcl-serapeum: Update to 20231203....* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 20231203. Change-Id: If8c364cde4dce2943d6e21770eec90c1ab05bc67 Pierre Neidhardt
2023-12-12gnu: openssl: Don't error when targeting avr....* gnu/packages/tls.scm (target->openssl-target): Add case for avr. Change-Id: I1cfc8b50fa4b2b864f8f8aa8898cc405ffc02580 Efraim Flashner
2023-12-12gnu: system->llvm-target-arch: Add avr target....* gnu/packages/llvm.scm (system->llvm-target-arch): Add case for avr. Change-Id: I5291d396ad513cfecdf8f0a6f799ea095fc8d994 Efraim Flashner
2023-12-12gnu: make-crust-package: Don't run from avr....* gnu/packages/firmware.scm (make-crust-package)[arguments]: In make-flags don't create tools which can be run from avr. Change-Id: I118b4941889b884de1e491ace3818d878a887d7c Efraim Flashner
2023-12-12gnu: linux-libre: Update to 6.6.6....This kernel release fixes WiFi regressions introduced in 6.6.5: https://lore.kernel.org/lkml/2023121141-mongoose-dazzler-be1b@gregkh/T/#t https://cdn.kernel.org/pub/linux/kernel/v6.x/ChangeLog-6.6.6 * gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.6. (linux-libre-6.6-pristine-source): Update hash. Change-Id: I502e166eaa7c179c52c581e311d3055032448be9 Hilton Chain
2023-12-11gnu: lean: Update to 3.51.1....* gnu/packages/lean.scm (lean): Update to 3.51.1. [home-page]: Use new home page. [arguments]<#:phases>: Remove stale phase 'patch-tests-shebangs'. [inputs]: Remove bash-minimal. Change-Id: Ib90a124b4a6b06fb30223ad4b9254249e56dd086 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2023-12-11gnu: lean: Use G-expressions....* gnu/packages/lean.scm (lean)[arguments]: Use G-expressions. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2023-12-11gnu: pdfarranger: Update to 1.10.1....* gnu/packages/pdf.scm (pdfarranger): Update to 1.10.1. [arguments]: Add set-home phase. Change-Id: Id31925e7e34fc4b23abb73456bac8cd0012f1d6f Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jack Hill
2023-12-11gnu: openvpn: Update to 2.6.7....* gnu/packages/vpn.scm (openvpn): Update to 2.6.7. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Sergey Trofimov
2023-12-11gnu: libgpg-error: Do not assume that target is a triplet....Fixes a bug exposed with be5ec2ebb4bde4b4f702a30f08849dff05cceccd, which introduces the “avr” target, which has no hyphen. * gnu/packages/gnupg.scm (libgpg-error)[arguments]: In ‘cross-symlinks’ phase, adjust code to deal with TARGET lacking a hyphen. Change-Id: I1aff6a94a7c92626f931c459d1dc0509f9bcfc00 Ludovic Courtès
2023-12-11gnu: rust-twox-hash-1: Update to 1.6.3....* gnu/packages/crates-io.scm (rust-twox-hash-1): Update to 1.6.3. [cargo-inputs]: Add rust-digest-0.10. Replace rust-rand-0.7 with 0.8. Change-Id: I0bc497bba4dfa01d054e415c4ac1c2757aa29ecf Efraim Flashner
2023-12-10gnu: rust-sha1-asm-0.4: Update to 0.4.4....* gnu/packages/crates-io.scm (rust-sha1-asm-0.4): Update to 0.4.4. Change-Id: I9e5f3cb221fbe3c1099a714be86e8ca26b1d97aa Efraim Flashner