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2023-03-30gnu: hurd: Update to 3ff7053....* gnu/packages/hurd.scm (hurd-headers): Do it. Also backport some patches to make it build, and remove older patches. Also stop pretending we're on i586-pc-gnu. (hurd): Remove unneeded patches. * gnu/packages/patches/hurd-add-without-rump-configure-option.patch: * gnu/packages/patches/hurd-fix-types-of-read-write-and-readables-methods-2.patch: * gnu/packages/patches/hurd-fix-types-of-read-write-and-readables-methods.patch: New files. * gnu/packages/patches/hurd-cross.patch: * gnu/packages/patches/hurd-xattr.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Register and unregister them. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: gnumach: Update to 1.8+git20220827....* gnu/packages/hurd.scm (gnumach-headers): Do it. * gnu/packages/patches/gnumach-add-missing-const_mach_port_name_array_t-type.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: mig: Update to 1.8+git20220827....* gnu/packages/hurd.scm (mig): Do it. * gnu/packages/patches/mig-cpu.h-generation.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: cross-base: Removed useless inputs to xhurd-core-headers....* gnu/packages/cross-base.scm (cross-kernel-headers*): Remove them. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: cross-base: Add cross arguments to hurd derivatives....* gnu/packages/cross-base.scm (cross-kernel-headers*): Add --build and --host to xhurd-headers and xhurd-minimal. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: cross-base: Factor out cross-mig....* gnu/packages/cross-base.scm (cross-mig): New exported procedure. (cross-gnumach-headers): New procedure. (cross-kernel-headers*): Factor them out. (cross-libc*): Use them there. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: gcc@11: Patch libpthread on GNU/Hurd....* gnu/packages/gcc.scm (gcc-11)[arguments]: Add 'patch-hurd-libpthread' phase. * gnu/packages/patches/gcc-11-libstdc++-hurd-libpthread.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-30gnu: cross-base: Use gexps for 'cross-gcc-arguments'....* gnu/packages/cross-base.scm (cross-gcc-arguments): Switch to gexps. Ludovic Courtès
2023-03-30gnu: glibc: Work around broken GNU Mach header detection....* gnu/packages/base.scm (%glibc/hurd-configure-flags): New variable. (glibc)[arguments]: Use it. (glibc/hurd-headers)[arguments]: likewise. * gnu/packages/cross-base.scm (cross-libc*): Likewise. Co-authored-by: Josselin Poiret <dev@jpoiret.xyz> Ludovic Courtès
2023-03-30gnu: python-pyqtwebengine: Update to 5.15.9....* gnu/packages/qt.scm (python-pyqtwebengine): Update to 5.15.9. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-pyqt-builder. [arguments]: Move 'configure phase into #:configure-flags, drop 'make-namespace, add 'set-include-dirs. Lars-Dominik Braun
2023-03-30gnu: python-pyqt: Update to 5.15.9....Version 5.15.8 does not build. * gnu/packages/qt.scm (python-pyqt): Update to 5.15.9. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-pyqt-builder. [arguments]: Disable tests, move 'configure phase into #:configure-flags. Lars-Dominik Braun
2023-03-30gnu: python-pyqt-builder: Update to 1.14.1....* gnu/packages/qt.scm (python-pyqt-builder): Update to 1.14.1. Lars-Dominik Braun
2023-03-30gnu: python-sip: Update to 6.7.7....* gnu/packages/patches/python-sip-include-dirs.patch: New file. * gnu/local.mk: Add it. * gnu/packages/qt.scm (python-sip): Update to 6.7.7. [propagated-inputs]: Add python-ply. [source]: Use patch. Lars-Dominik Braun
2023-03-27gnu: ucx: Update to 1.14.0....* gnu/packages/fabric-management.scm (ucx): Update to 1.14.0. * gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Adapt patch to new ucx version. Guillaume Le Vaillant
2023-03-27gnu: psm2: Update to 11.2.230....* gnu/packages/linux.scm (psm2): Update to 11.2.230. Guillaume Le Vaillant
2023-03-27gnu: vtk: Don't pin to proj-7....* gnu/packages/image-processing.scm (vtk)[inputs]: Replace proj-7 by proj. Guillaume Le Vaillant
2023-03-26gnu: u-boot: Fix build under Python 3.10....* gnu/packages/patches/u-boot-fix-build-python-3.10.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/bootloaders.scm (u-boot): Apply patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-26gnu: opensbi: Build with default gcc, with microarch rv64g....* gnu/packages/firmware.scm (make-opensbi-package): Remove specific #:xgcc for the cross-toolchain, there is not reason for it now. Also set the microarch to rv64g, so that it builds. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-25gnu: qtquickcontrols2-5: Fix source hash....* gnu/packages/qt.scm (qtquickcontrols2-5)[source]: Fix hash. Guillaume Le Vaillant
2023-03-25gnu: python-pyzmq: Update to 25.0.2....* gnu/packages/python-xyz.scm (python-pyzmq): Update to 25.0.2. [source]: Update snippet. [arguments]: Add 'disable-draft-test' phase. [native-inputs]: Add python-pytest-asyncio and python-tornado. Guillaume Le Vaillant
2023-03-25gnu: volk: Update to 3.0.0....* gnu/packages/engineering.scm (volk): Update to 3.0.0. [arguments]: Add 'disable-check-lgpl-test' phase. Remove trailing booleans. [license]: Replace gpl3+ by lgpl3+. Add asl2.0. Guillaume Le Vaillant
2023-03-25gnu: cl-cffi-gtk: Update to 3.8.8-3.1700fe6....* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk): Update to 3.8.8-3.1700fe6. [source,home-page]: Switch to active repository. [inputs]: Remove labels. [arguments]: Update 'fix-paths' phase. Guillaume Le Vaillant
2023-03-25gnu: cl-cffi: Update to 0.24.1-1.3397035....* gnu/packages/lisp-xyz.scm (sbcl-cffi): Update to 0.24.1-1.3397035. [arguments]: Remove 'fix-arm-support' phase. Update 'fix-paths' phase. Guillaume Le Vaillant
2023-03-23gnu: python-pre-commit: Move deprecated variable next to replacement....This fixes a module import dependency cycle, which was introduced in 831baaf81e57ce9d9053ba6f9e0653a2d27298c4 ("gnu: python-pre-commit: Replace with pre-commit."). The rule of thumb to avoid these is that the deprecated package should live next to the replacement package (in the same module). * gnu/packages/python-xyz.scm (python-pre-commit): Move to... * gnu/packages/version-control.scm (python-pre-commit): ... here. Maxim Cournoyer
2023-03-21gnu: git: Fix missing native-inputs after commit ccb62d8feb....* gnu/packages/version-control.scm (git)[native-inputs]: Restore native-inputs to what they were prior to the merge commit ccb62d8feb. Signed-off-by: Andreas Enge <andreas@enge.fr> Kaelyn Takata
2023-03-20gnu: gnulib: Depend on git-minimal/pinned....* gnu/packages/build-tools.scm (gnulib)[native-inputs]: Change git to git-minimal/pinned. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Josselin Poiret
2023-03-20Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-03-20gnu: openjdk10: Apply patch again....This partially reverts commit 7636c49b45adb9870cf416c64bde032ec858a820 where the patch was dropped. * gnu/packages/java.scm (openjdk10)[source]: Apply patch. Andreas Enge
2023-03-20Merge remote-tracking branch 'origin/master' into core-updatesAndreas Enge
2023-03-20gnu: Add r-annotationhubdata....* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2023-03-20gnu: Add r-affylmgui....* gnu/packages/bioconductor.scm (r-affylmgui): New variable. Mădălin Ionel Patrașcu
2023-03-20gnu: Add r-tkrplot....* gnu/packages/cran.scm (r-tkrplot): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>. Mădălin Ionel Patrașcu
2023-03-20gnu: Add r-affyplm....* gnu/packages/bioconductor.scm (r-affyplm): New variable. Mădălin Ionel Patrașcu
2023-03-20gnu: Add r-affyilm....* gnu/packages/bioconductor.scm (r-affyilm): New variable. Mădălin Ionel Patrașcu
2023-03-20gnu: python-google-api-client: Update to 1.12.8....* gnu/packages/python-web.scm (python-google-api-client): Update to 1.12.8. [arguments]: Remove custom phase to adjust setup.py. [native-inputs]: Remove python-oauth2client, python-uritemplate. Move python-httplib2, python-six ... [propagated-inputs]: ... here. Add python-google-api-core-1, python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3. Efraim Flashner
2023-03-20gnu: python-googleapis-common-protos: Update to 1.56.4....* gnu/packages/python-web.scm (python-googleapis-common-protos): Update to 1.56.4. [arguments]: Enable test suite. Efraim Flashner
2023-03-20gnu: Add python-google-api-core-1....* gnu/packages/python-web.scm (python-google-api-core-1): New variable. Efraim Flashner
2023-03-20gnu: Add python-google-auth-1....* gnu/packages/python-web.scm (python-google-auth-1): New variable. Efraim Flashner
2023-03-20gnu: Add python-google-auth-httplib2....* gnu/packages/python-web.scm (python-google-auth-httplib2): New variable. Efraim Flashner
2023-03-20gnu: Add python-uritemplate-3....* gnu/packages/python-web.scm (python-uritemplate-3): New variable. Efraim Flashner
2023-03-20gnu: python-httplib2: Update to 0.15.0....* gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0. [source]: Download using git. [arguments]: Add a phase to adjust the test package version requirements. [native-inputs]: Add python-flake8, python-future, python-mock, python-pytest, python-pytest-cov, python-pytest-forked, python-pytest-randomly, python-pytest-timeout, python-pytest-xdist, python-six. [home-page]: Switch to new upstream homepage. Efraim Flashner
2023-03-20gnu: zig: Increase max-silent-time....* gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3 hours. Efraim Flashner
2023-03-20gnu: Add transanno....* gnu/packages/bioinformatics.scm (transanno): New variable. Ricardo Wurmus
2023-03-20gnu: Add rust-autocompress-0.2....* gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable. Ricardo Wurmus
2023-03-20gnu: Add rust-temp-testdir-0.2....* gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable. Ricardo Wurmus
2023-03-20gnu: Add rust-bio-0.41....* gnu/packages/crates-io.scm (rust-bio-0.41): New variable. Ricardo Wurmus
2023-03-20gnu: procps: Fix test failure on i686....* gnu/packages/patches/procps-strtod-test.patch: New file. * gnu/packages/linux.scm (procps): Add patch. * gnu/local.mk (dist_patch_DATA): Register patch. Andreas Enge
2023-03-20gnu: procps: Update to 4.0.3....* gnu/packages/linux.scm (procps): Update to 4.0.3. [native-inputs]: Add pkg-config. Andreas Enge
2023-03-20gnu: ruby-rugged: Update to 1.6.2-0.6379f23 and enable tests....* gnu/packages/ruby.scm (ruby-rugged): Update to 1.6.2-0.6379f23. [source]: Fetch via git. [arguments]: Enable tests. Add #:phases. [native-inputs]: Add git-minimal/pinned. Remove ruby-minitest and ruby-pry. Maxim Cournoyer
2023-03-20gnu: python-django-rq: Update to 2.7.0....* gnu/packages/django.scm (python-django-rq): Update to 2.7.0. [arguments]: Replace django-admin.py with django-admin in check phase. Maxim Cournoyer