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2021-07-31gnu: glib-networking: Skip failing test....* gnu/packages/patches/glib-networking-gnutls-binding.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (glib-networking)[source]: Use it. Ludovic Courtès
2021-07-31gnu: icedtea@1.13.13: Add 'file-name' field to the origins....* gnu/packages/java.scm (icedtea-6)[native-inputs]: Add 'file-name' field to all the origins. Ludovic Courtès
2021-07-31gnu: gnutls: Patch the Guile bindings for EINTR/EAGAIN handling....* gnu/packages/patches/gnutls-guile-eintr-eagain.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (gnutls)[source]: Use it. Ludovic Courtès
2021-07-31gnu: mesa: Update to 21.1.6....* gnu/packages/gl.scm (mesa): Update to 21.1.6. * gnu/packages/patches/mesa-skip-tests.patch: Remove cache_test.c as it is no longer needed (test passes). Signed-off-by: Ludovic Courtès <ludo@gnu.org> John Kehayias
2021-07-31gnu: libdrm: Update to 2.4.107....* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.107, and change libpciaccess to a propagated input as the pkg-config for libdrm_intel now includes it in the libs. [arguments]: Add conditional testing support to the replacement for the standard check phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Kaelyn Takata
2021-07-30build-system/python: Handle missing metadata on Python 2....* gnu/packages/aux-files/python/sanity-check.py: Catch the less specific EnvironmentError rather than FileNotFoundError as the latter is Python 3 only. Marius Bakke
2021-07-29Merge branch 'master' into core-updates-frozen... Conflicts: gnu/packages/bioinformatics.scm gnu/packages/cmake.scm gnu/packages/curl.scm gnu/packages/emacs-xyz.scm gnu/packages/gpodder.scm gnu/packages/music.scm gnu/packages/patches/glibc-bootstrap-system.patch gnu/packages/python-xyz.scm gnu/packages/shells.scm gnu/packages/statistics.scm Marius Bakke
2021-07-29gnu: r-xcms: Update to 3.14.1....* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.1. Ricardo Wurmus
2021-07-29gnu: r-reportingtools: Update to 2.32.1....* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.1. Ricardo Wurmus
2021-07-29gnu: php: Update to 7.4.22 [security fixes]....* gnu/packages/php.scm (php): Update to 7.4.22. Tobias Geerinckx-Rice
2021-07-29gnu: r-matrixstats: Update to 0.60.0....* gnu/packages/statistics.scm (r-matrixstats): Update to 0.60.0. Ricardo Wurmus
2021-07-29gnu: r-e1071: Update to 1.7-8....* gnu/packages/statistics.scm (r-e1071): Update to 1.7-8. Ricardo Wurmus
2021-07-29gnu: r-protolite: Update to 2.1.1....* gnu/packages/cran.scm (r-protolite): Update to 2.1.1. Ricardo Wurmus
2021-07-29gnu: r-lwgeom: Update to 0.2-7....* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-7. Ricardo Wurmus
2021-07-29gnu: r-mgsub: Update to 1.7.3....* gnu/packages/cran.scm (r-mgsub): Update to 1.7.3. Ricardo Wurmus
2021-07-29gnu: r-matrixcalc: Update to 1.0-5....* gnu/packages/cran.scm (r-matrixcalc): Update to 1.0-5. Ricardo Wurmus
2021-07-29gnu: r-leiden: Update to 0.3.9....* gnu/packages/cran.scm (r-leiden): Update to 0.3.9. Ricardo Wurmus
2021-07-29gnu: r-dalex: Update to 2.3.0....* gnu/packages/cran.scm (r-dalex): Update to 2.3.0. Ricardo Wurmus
2021-07-29gnu: r-sf: Update to 1.0-2....* gnu/packages/cran.scm (r-sf): Update to 1.0-2. Ricardo Wurmus
2021-07-29gnu: r-summarytools: Update to 1.0.0....* gnu/packages/cran.scm (r-summarytools): Update to 1.0.0. Ricardo Wurmus
2021-07-29gnu: r-ggeffects: Update to 1.1.1....* gnu/packages/cran.scm (r-ggeffects): Update to 1.1.1. Ricardo Wurmus
2021-07-29gnu: r-pillar: Update to 1.6.2....* gnu/packages/cran.scm (r-pillar): Update to 1.6.2. Ricardo Wurmus
2021-07-29gnu: r-vioplot: Update to 0.3.7....* gnu/packages/cran.scm (r-vioplot): Update to 0.3.7. Ricardo Wurmus
2021-07-29gnu: r-stringdist: Update to 0.9.7....* gnu/packages/cran.scm (r-stringdist): Update to 0.9.7. Ricardo Wurmus
2021-07-29gnu: r-broom: Update to 0.7.9....* gnu/packages/cran.scm (r-broom): Update to 0.7.9. Ricardo Wurmus
2021-07-29gnu: r-rpostgresql: Update to 0.7....* gnu/packages/cran.scm (r-rpostgresql): Update to 0.7. Ricardo Wurmus
2021-07-29gnu: r-arrow: Update to 5.0.0....* gnu/packages/cran.scm (r-arrow): Update to 5.0.0. Ricardo Wurmus
2021-07-29gnu: apache-arrow: Update to 5.0.0....* gnu/packages/databases.scm (apache-arrow): Update to 5.0.0. Ricardo Wurmus
2021-07-29gnu: util-linux: Explicitly depend on 'file'.......instead of using the variant that happens to be in %FINAL-INPUTS. * gnu/packages/linux.scm (util-linux)[inputs]: Add FILE. While at it, remove labels. [native-inputs]: Remove labels. Marius Bakke
2021-07-29gnu: util-linux: Remove cross-compilation workaround....* gnu/packages/linux.scm (util-linux)[arguments]: Look for /etc/services in both NATIVE-INPUTS and INPUTS, instead of by input label. Remove unused variable. [inputs]: When cross-compiling, don't add NET-BASE. Marius Bakke
2021-07-29gnu: util-linux: Update to 2.37.1....This fixes an infinite loop in 'mkswap'; see <https://bugzilla.redhat.com/show_bug.cgi?id=1971877>. * gnu/packages/linux.scm (util-linux): Update to 2.37.1. Marius Bakke
2021-07-29gnu: r-with-tests: Add missing TeX Live packages....* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Add texlive-grfext and texlive-latex-l3backend to the texlive union. Ricardo Wurmus
2021-07-29gnu: Add texlive-grfext....* gnu/packages/tex.scm (texlive-grfext): New variable. Ricardo Wurmus
2021-07-29gnu: vim-guix-vim: Update to 0.3.0....* gnu/packages/vim.scm (vim-guix-vim): Update to 0.3.0. [source]: Update source uri. Efraim Flashner
2021-07-29gnu: julia-weakrefstrings: Update to 1.1.0....* gnu/packages/julia-xyz.scm (julia-weakrefstrings): Update to 1.1.0. Efraim Flashner
2021-07-29gnu: julia-typedtables: Update to 1.4.0....* gnu/packages/julia-xyz.scm (julia-typedtables): Update to 1.4.0. Efraim Flashner
2021-07-29gnu: julia-staticarrays: Update to 1.2.9....* gnu/packages/julia-xyz.scm (julia-staticarrays): Update to 1.2.9. Efraim Flashner
2021-07-29gnu: julia-static: Update to 0.3.0....* gnu/packages/julia-xyz.scm (julia-static): Update to 0.3.0. Efraim Flashner
2021-07-29gnu: julia-sortingalgorithms: Update to 1.0.1....* gnu/packages/julia-xyz.scm (julia-sortingalgorithms): Update to 1.0.1. Efraim Flashner
2021-07-29gnu: julia-simpletraits: Update to 0.9.4....* gnu/packages/julia-xyz.scm (julia-simpletraits): Update to 0.9.4. Efraim Flashner
2021-07-29gnu: julia-recipespipeline: Update to 0.3.4....* gnu/packages/julia-xyz.scm (julia-recipespipeline): Update to 0.3.4. Efraim Flashner
2021-07-29gnu: julia-plotutils: Update to 1.0.11....* gnu/packages/julia-xyz.scm (julia-plotutils): Update to 1.0.11. Efraim Flashner
2021-07-29gnu: julia-offsetarrays: Update to 1.10.3....* gnu/packages/julia-xyz.scm (julia-offsetarrays): Update to 1.10.3. Efraim Flashner
2021-07-29gnu: julia-mutablearithmetics: Update to 0.2.20....* gnu/packages/julia-xyz.scm (julia-mutablearithmetics): Update to 0.2.20. Efraim Flashner
2021-07-29gnu: julia-matrixfactorizations: Update to 0.8.4....* gnu/packages/julia-xyz.scm (julia-matrixfactorizations): Update to 0.8.4. Efraim Flashner
2021-07-29gnu: julia-lazyarrays: Update to 0.21.11....* gnu/packages/julia-xyz.scm (julia-lazyarrays): Update to 0.21.11. Efraim Flashner
2021-07-29gnu: julia-json3: Update to 1.9.0....* gnu/packages/julia-xyz.scm (julia-json3): Update to 1.9.0. Efraim Flashner
2021-07-29gnu: julia-irtools: Update to 0.4.3....* gnu/packages/julia-xyz.scm (julia-irtools): Update to 0.4.3. Efraim Flashner
2021-07-29gnu: julia-imagecore: Update to 0.9.1....* gnu/packages/julia-xyz.scm (julia-imagecore): Update to 0.9.1. Efraim Flashner
2021-07-29gnu: julia-http: Update to 0.9.12....* gnu/packages/julia-xyz.scm (julia-http): Update to 0.9.12. Efraim Flashner
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