| Age | Commit message (Expand) | Author |
|---|
| 2024-06-30 | gnu: Add python-fast-histogram....* gnu/packages/python-science.scm (python-fast-histogram): New variable.
Change-Id: Ibecdd87db9c132052a8eca76c01108c4f6e624c4
| Sharlatan Hellseher |
| 2024-06-30 | gnu: Add python-corner....* gnu/packages/python-science.scm (python-corner): New variable.
Change-Id: I75c3a88ba4b729fb7c9a50dd85a00b22cdcaa828
| Sharlatan Hellseher |
| 2024-06-26 | gnu: Add python-spin....* gnu/packages/python-science.scm (python-spin): New variable.
Change-Id: I794845d559f3f4f3ab9cf98b0e4a4321b470f7f8
Signed-off-by: jgart <jgart@dismail.de>
| Vinicius Monego |
| 2024-06-16 | gnu: Add python-formulaic....* gnu/packages/python-science.scm (python-formulaic): New variable.
Change-Id: Ib21bfdc3050c042abc7494501d7b0409be8ed3bb
| Ricardo Wurmus |
| 2024-06-16 | gnu: Add python-scikit-survival....* gnu/packages/python-science.scm (python-scikit-survival): New variable.
Change-Id: I657f5d737280cac74f93f7f3d2b56a9a0a41588e
| Ricardo Wurmus |
| 2024-05-30 | gnu: python-unyt: Fix version detection....* gnu/packages/python-science.scm (python-unyt): Fix version detection.
[native-inputs]: Add python-setuptools-scm.
Change-Id: I96e7d2530b15299a39911bebf62b76a9191ea91b
Signed-off-by: Andrew Tropin <andrew@trop.in>
| Sharlatan Hellseher |
| 2024-05-26 | gnu: python-scikit-image: Disable test_ellipse_parameter_stability....As it's flaky, see https://github.com/scikit-image/scikit-image/issues/7061
* gnu/packages/python-science.scm (python-scikit-image)[arguments]: Add
#:test-flags.
Change-Id: Ic1fc301eb0fad5330c34780ce096c446c1076824
| Christopher Baines |
| 2024-05-22 | gnu: python-pandera: Update to 0.18.0, fix build....* gnu/packages/python-science.scm (python-pandera): Update to 0.18.0.
[arguments] <#:test-flags>: Disable one more failing test.
Change-Id: I4d3f59dae8d90ea0afbe9cc932fc6163def282c9
| Sharlatan Hellseher |
| 2024-05-11 | gnu: python-scikit-image: Update to 0.23.2....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.23.2.
Change-Id: Ief01a2aef5202dd859f9337a45105088d605509e
| Vinicius Monego |
| 2024-05-05 | gnu: python-gpy: Update to 1.13.1....* gnu/packages/python-science.scm (python-gpy): Update to 1.13.1.
[source]: Remove snippet.
[build-system]: Use pyproject-build-system.
[arguments]: Remove phase 'remove-plotting-tests; add phase 'compatibility.
[native-inputs]: Remove python-nose and python-climin; add python-pytest,
python-matplotlib, and python-pods.
Change-Id: I1ed95e3ad2e8444979fd2cf272d7f3104b1bf2ec
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-paramz: Update to 0.9.6....* gnu/packages/python-science.scm (python-paramz): Update to 0.9.6.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-nose.
Change-Id: I62a2f7ecf600f48da74f4d233e108360a583d5ca
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pingouin: Update to 0.5.4....* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.4.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase; add 'sklearn-compatibility phase;
skip one test.
Change-Id: I8d13f15558eadee0547f04bc4bb89a0fd0e0767b
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-plotnine: Fix version string....* gnu/packages/python-science.scm (python-plotnine)[native-inputs]: Add
python-setuptools-scm.
Change-Id: I0fc2f3ad7edcdaaa5e3bf9774bc6840c8fbeb727
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-plotnine: Disable test because of harmless warning....* gnu/packages/python-science.scm (python-plotnine)[arguments]: Disable
test_save_method which prints an unexpected warning..
Change-Id: I28a20b85ee549311bed534efbf801db930419ca9
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-dask: Propagate python-dask-expr....* gnu/packages/python-xyz.scm (python-dask/bootstrap): New variable.
(python-dask)[propagated-inputs]: Add python-dask-expr.
* gnu/packages/python-science.scm (python-dask-expr)[propagated-inputs]:
Remove python-dask.
[native-inputs]: Add python-dask/bootstrap.
Change-Id: I1196641425421c7dde94c6fea8d573e78db9c402
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pandas-stubs: Accept numpy 1.23....* gnu/packages/python-science.scm (python-pandas-stubs)[arguments]: Add phase
'relax-requirements.
Change-Id: I62e04574d53abd7d67068d08475522dd8989dcca
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pandas-stubs: Update tests....This is a follow-up to adding ORC support to pyarrow.
* gnu/packages/python-science.scm (python-pandas-stubs)[arguments]: Disable
more tests that are due to enabling ORC support to pyarrow.
Change-Id: I8c3ca6afff8128792738251c85a1dba3dc3b0569
| Ricardo Wurmus |
| 2024-05-05 | gnu: Add python-scikit-build-core....* gnu/packages/python-science.scm (python-scikit-build-core): New variable.
Change-Id: If234d19d720afe88f6893bdd36fcc4955a45c5d3
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-distributed: Update to 2024.4.2....* gnu/packages/python-science.scm (python-distributed): Update to 2024.4.2.
[propagated-inputs]: Add python-dask-expr.
[arguments]: Adjust tests.
Change-Id: I9d3b45d14ae052f3a5a5dec3587bc01d13e4b71f
| Ricardo Wurmus |
| 2024-05-05 | gnu: Add python-dask-expr....* gnu/packages/python-science.scm (python-dask-expr): New variable.
Change-Id: I691593ab713fe865c771aa68b5521c4c10cc58f6
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pandas-stub: Update to 2.1.1.230928....This is a follow-up to commit ff2d0ecfca87450c82df8d74666261b1c19cbe66.
* gnu/packages/python-science.scm (python-pandas-stub): Update to
2.1.1.230928.
Change-Id: I2e8ce18bd25399b467a6ff2a6fb846f8bb969e4c
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pandas-2: Fix version....* gnu/packages/python-science.scm (python-pandas-2)[arguments]: Write version
string to "_version.py", not "_version_meson.py" to avoid reporting the
version as "0+unknown".
Change-Id: I1a18814e37c023102714326bc8bd505705234205
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pyjanitor: Update to 0.27.0....* gnu/packages/python-science.scm (python-pyjanitor): Update to 0.27.0.
[arguments]: Disable a few more tests; add phase 'pandas-compat.
Change-Id: Ia8891971a687342166f30ded11f9e341a208d95e
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-xarray: Disable tests that are known to fail....* gnu/packages/python-science.scm (python-xarray)[arguments]: Disable two
tests.
Change-Id: I70954173e0aca5a377cf19476e9390a97febadc7
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-pandas: Default to version 2.x....* gnu/packages/python-science.scm (python-pandas): Define as alias for
python-pandas-2; rename existing definition to...
(python-pandas-1): ...this new variable.
Change-Id: If359e3b2d42c683d7d0152b1757bbc5a979c999b
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-scikit-opt: Add missing input....* gnu/packages/python-science.scm (python-scikit-opt)[propagated-inputs]: Add
python-pytorch.
Change-Id: I037cc43bedeaebb05bf038c0bca72919f8c27c40
| Ricardo Wurmus |
| 2024-05-05 | gnu: Add python-cvxpy....* gnu/packages/python-science.scm (python-cvxpy): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I440ab3768cbc4e78364dc31cf9484effd9670f49
| Marco Baggio |
| 2024-05-05 | gnu: Add python-ecos....* gnu/packages/python-science.scm (python-ecos): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I83d9b746f5f3563f417efc5d18911f2eb04f201c
| Marco Baggio |
| 2024-05-05 | gnu: Add python-osqp....* gnu/packages/python-science.scm (python-osqp): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Id6f1665505469fd6543046636b82d0730b319df3
| Marco Baggio |
| 2024-05-05 | gnu: Add python-qdldl....* gnu/packages/python-science.scm (python-qdldl): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I523ecb2292c9b514b548e2130d0d43bb77317b00
| Marco Baggio |
| 2024-05-05 | gnu: Add python-scs....* gnu/packages/python-science.scm (python-scs): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I6c5ecdac4b558aab4b8ee396dff1dfc9cdec07f0
| Marco Baggio |
| 2024-05-05 | gnu: Add python-fastcluster....* gnu/packages/python-science.scm (python-fastcluster): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Ifc5229a4d00f581eb358a1f41fc3479fd1c33c2e
| Marco Baggio |
| 2024-05-05 | gnu: Add python-clarabel....* gnu/packages/python-science.scm (python-clarabel): New variable.
Change-Id: I28459162460ca9bf9e9557122f611c677afadc27
| Ricardo Wurmus |
| 2024-05-05 | gnu: Add python-xarray-schema....* gnu/packages/python-science.scm (python-xarray-schema): New variable.
Change-Id: I4ca650f2c2872698fc22392add169f44b9e2e035
| Ricardo Wurmus |
| 2024-05-05 | gnu: python-xarray-datatree: Add missing input....* gnu/packages/python-science.scm (python-xarray-datatree)[native-inputs]:
Add python-setuptools-scm.
Change-Id: I86a7280ba687385edb15f30dae1a20e3811a0beb
| Ricardo Wurmus |
| 2024-04-30 | gnu: Add python-supersmoother....* gnu/packages/python-science.scm (python-supersmoother): New variable.
Change-Id: I8fb43d746757014e3b773c07458b777b893adb4a
| Sharlatan Hellseher |
| 2024-04-22 | gnu: python-xarray-dataclasses: Add missing test input....* gnu/packages/python-science.scm (python-xarray-dataclasses)[native-inputs]:
Add python-pytest.
Change-Id: I137d49380d772f11f75837aa9a915ced85cfc1a2
| Ricardo Wurmus |
| 2024-04-22 | gnu: python-pandas-2: Skip expensive tests....* gnu/packages/python-science.scm (python-pandas-2)[arguments]: Set PANDAS_CI
variable.
Change-Id: I7c400ff260b3c833be1a55a30de021a81a5cbacb
| Ricardo Wurmus |
| 2024-04-22 | gnu: Add python-pandas-2....* gnu/packages/python-science.scm (python-pandas-2): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I7f0510f9021d4eac3c981e5e58f73dc3ec7efd2f
| Nicolas Graves |
| 2024-04-22 | gnu: Add python-xarray-datatree....* gnu/packages/python-science.scm (python-xarray-datatree): New variable.
Change-Id: I403f241b6daae8b5c835f4517a1dceca0393f8e6
| Ricardo Wurmus |
| 2024-04-22 | gnu: Add python-xarray-dataclasses....* gnu/packages/python-science.scm (python-xarray-dataclasses): New variable.
Change-Id: I55f258e36ea70a2efb142bd652a81d70771a457c
| Ricardo Wurmus |
| 2024-03-31 | gnu: Add python-pods....* gnu/packages/python-science.scm (python-pods): New variable.
Change-Id: I9044baaa750ee9cb7411e41dcee1df17b57741db
| Maxim Cournoyer |
| 2024-03-29 | gnu: python-distributed: Disable parallel tests....As seen in <https://ci.guix.gnu.org/build/3708961/log/raw>, parallel
tests introduced package build regression.
* gnu/packages/python-science.scm (python-distributed) [arguments]
<#:test-flags>: Disable parallel tests.
[native-inputs]: Remove python-pytest-xdist.
Change-Id: I3a04098604fa03ab91ceb228dd70c34c3d84db78
| Sharlatan Hellseher |
| 2024-03-29 | gnu: python-distributed: Speed up tests....* gnu/packages/python-science.scm (python-distributed) [arguments]
<#:test-flags>: Add option to run tests in parallel. Disable 3 more
flaky tests.
[native-inputs]: Add python-pytest-xdist. Sort alphabetically.
Change-Id: I588c1a1dc82e3208cc1eeeefbdc58fb080775ac0
| Sharlatan Hellseher |
| 2024-03-28 | gnu: python-upsetplot: Update to 0.9.0....* gnu/packages/python-science.scm (python-upsetplot): Update to 0.9.0.
[source]: Remove obsolete snippet.
[arguments]: Remove custom check phase.
[build-system]: Use pyproject-build-system.
Change-Id: I68bcd6840577a12594e491e9fd5e114f9261f6c7
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| nafkhamdc |
| 2024-02-10 | gnu: Add python-scikit-opt....* gnu/packages/python-science.scm (python-scikit-opt): New variable.
Change-Id: I47d6b35d9658a37a242b4db61d293fa7efd33802
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| TimotheeMathieu |
| 2024-02-06 | gnu: python-traittypes: Simplify package....* gnu/packages/python-science.scm (python-traittypes) [build-system]:
Swap to pyproject-build-system.
[arguments]: Move excluded tests to <#:test-flags>. Use standard 'check
phase.
Change-Id: I4cab0c94036a7e5f0851edf2833dfac2f675d2a0
| Sharlatan Hellseher |
| 2024-02-06 | gnu: python-pynrrd: Update to 1.0.0....* gnu/packages/python-science.scm (python-pynrrd): Update to 1.0.0.
[arguments]: Keep 'ensure-no-mtimes-pre-1980 phase as it's building with
it successfully.
[propagated-inputs]: Add python-nptyping and python-typing-extensions.
Change-Id: Ic4dcd0825e71d3eb4acd39694bee9e22e8485f9f
| Sharlatan Hellseher |
| 2024-02-06 | gnu: python-pynrrd: Improve description....* gnu/packages/python-science.scm (python-pynrrd) [description]: Add
definition of NRRD.
Change-Id: I0335df0eb4be600d81799da64374ddfb49b06720
| Sharlatan Hellseher |
| 2024-02-06 | gnu: Add python-pynrrd....* gnu/packages/python-science.scm (python-pynrrd): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Antero Mejr |
