Age | Commit message (Expand) | Author |
2024-12-22 | gnu: Add missing import....This is a followup to 696d949dccf66cbe953eebf329553e4d26ea7f0a.
Change-Id: I27ab43de95f976fc255a3dc9f1b85e906b869e52
| Zheng Junjie |
2024-12-22 | gnu: Add perl-test-postgresql....* gnu/packages/databases.scm (perl-test-postgresql): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-sql-translator....* gnu/packages/databases.scm (perl-sql-translator): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-dbix-class-timestamp....* gnu/packages/databases.scm (perl-dbix-class-timestamp): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-dbix-class-dynamicdefault....* gnu/packages/databases.scm (perl-dbix-class-dynamicdefault): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-dbicx-testdatabase....* gnu/packages/databases.scm (perl-dbicx-testdatabase): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-dbix-simple....* gnu/packages/databases.scm (perl-dbix-simple): New variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-22 | gnu: Add perl-dbix-class-deploymenthandler....* gnu/packages/databases.scm (perl-dbix-class-deploymenthandler): New
variable.
Signed-off-by: Danny Milosavljevic <dannym@friendly-machines.com>
| Antero Mejr |
2024-12-16 | gnu: python-adbc-driver-manager: Fix buld....* gnu/packages/databases.scm (python-adbc-driver-manager):
[native-inputs]: Remove python-pytest; add python-setuptools and
python-wheel.
Change-Id: Idda91f087d8169185a02a61ae6b69d5668ae88b3
| Sharlatan Hellseher |
2024-12-15 | gnu: python-sqlalchemy-2: Fix build....* gnu/packages/databases.scm (python-sqlalchemy-2)[native-inputs]: Add
python-wheel.
Change-Id: Ie35026f3049f9103397979cc6d0b8b347584d92d
| Ian Eure |
2024-12-13 | gnu: python-redis: Fix build....* gnu/packages/databases.scm (python-redis)
[arguments]<test-flags>: Refactor with 'string-join' to simplify test
skip procedure.
<phases>: Remove 'relax-requirements.
[native-inputs]: Add python-pytest-cov.
Change-Id: I595dc2bfe856ebac834ac7a80ac3862126c6b284
| Sharlatan Hellseher |
2024-12-13 | gnu: python-alembic: Update to 1.14.0....* gnu/packages/databases.scm (python-alembic): Update to 1.14.0.
[arguments]<test-flags>: Skip 4 tests requiring latest python-pytz.
[propagated-inputs]: Add python-typing-extensions.
[native-inputs]: Remove python-pytest-cov; add python-pytest,
python-setuptools, and python-wheel.
Change-Id: Ife6a19416839ad1f94e912f926871db362ab820c
| Sharlatan Hellseher |
2024-12-13 | gnu: python-redis: Fix build....* gnu/packages/databases.scm (python-redis)
[arguments]<test-flags>: Exclude one failing test.
[native-inputs]: Remove python-pytest-asyncio; add
python-pytest-asyncio-0.23.
Change-Id: I3660d61dfb6bad8311824c85a2ce7b28facd580b
| Sharlatan Hellseher |
2024-12-13 | gnu: python-pickleshare: Improve package style....* gnu/packages/databases.scm (python-pickleshare)
[build-system]: Swap to pyproject-build-system.
[arguments]<phases>: Use default 'check phase.
[native-inputs]: Add python-setuptools and python-wheel.
Change-Id: Ib53f1d3232112cff000e7413446f42085e945ee9
| Sharlatan Hellseher |
2024-12-13 | gnu: python-pymysql: Adjust inputs....* gnu/packages/databases.scm (python-pymysql) [native-inputs]: Add
python-setuptools and python-wheel.
Change-Id: I56bdbb7f182308fc63a85f3f1868bc245597725d
| Sharlatan Hellseher |
2024-12-13 | gnu: build-system/pyproject: Add missing native-inputs....* gnu/packages/bioinformatics.scm (python-ega-download-client)
[native-inputs]: Add python-setuptools and python-wheel.
* gnu/packages/databases.scm (datasette)[native-inputs]: Add
python-pip.
* gnu/packages/django.scm (python-django-localflavor,
python-django-contact-form)[native-inputs]: Add python-setuptools and
python-wheel.
* gnu/packages/graphviz.scm (python-uqbar)[native-inputs]: Add
python-setuptools and python-wheel.
* gnu/packages/jupyter.scm (python-jupyterlab-server)[native-inputs]:
Add python-wheel.
(python-nbstripout)[native-inputs]: Add python-setuptools and
python-wheel.
* gnu/packages/machine-learning.scm (python-captum,
python-linear-operator, python-gpytorch)[native-inputs]: Add
python-setuptools.
* gnu/packages/music.scm (abjad, abjad-ext-rmarkers,
abjed-ext-nauert, python-mutagen)[native-inputs]: Add
python-setuptools and python-wheel.
* gnu/packages/package-management.scm
(python-conda-package-handling)[native-inputs]: Add python-setuptools
and python-wheel.
(conda)[native-inputs]: Add python-wheel.
* gnu/packages/python-check.scm (python-pyinstrument,
python-pytest-testmon, python-pytest-trio, python-nbval,
python-pytest-toolbox)[native-inputs]: Add python-setuptools and
python-wheel.
(python-nptyping)[native-inputs]: Add python-setuptools.
* gnu/packages/python-check.scm (python-dask-expr)[native-inputs]:
Add python-setuptools and python-wheel.
* gnu/packages/python-web.scm (parfive, python-aioftp, python-hupper,
python-sanic, python-mechanicalsoup, python-tinycss, python-aiostream,
python-cbor2, gunicorn)[native-inputs]: Add python-setuptools and
python-wheel.
* gnu/packages/python-xyz.scm (python-apprise, python-jaraco-classes,
python-sparse, python-shtab, python-pyan3)[native-inputs]: Add
python-setuptools.
(python-jupytext, python-orderedmultidict, python-identify, python-nodeenv,
python-cfgv, python-zarr, python-multipart, python-nbconvert, python-cram,
python-immutables, python-numpydoc, python-cairosvg, python-unidecode,
python-black, python-multidict, python-mpv-jsonipc, python-humanize,
python-cmd2)[native-inputs]: Add python-setuptools and python-wheel.
(python-partd, python-dask, python-zarr)[native-inputs]: Add
python-wheel.
(python-nbconvert)[propagated-inputs]: Add texlive-etoolbox. Remove
duplicate textlive-jknapltx.
(python-isort)[native-inputs]: Add python-pip.
* gnu/packages/simulation.scm (python-fenics-dijitso)[native-inputs]:
Add python-setuptools and python-wheel.
* gnu/packages/sphinx.scm (python-pydata-sphinx-theme,
python-sphinx-autodoc-typehints)[native-inputs]: Add
python-setuptools.
* gnu/packages/syndication.scm (tuir)[native-inputs]: Add
python-setuptools and python-wheel.
* gnu/packages/terminals.scm (python-halo)[native-inputs]: Add
python-setuptools and python-wheel.
* gnu/packages/time.scm (python-arrow, python-dateutil)
[native-inputs]: Add python-setuptools and python-wheel.
* gnu/packages/version-control.scm (pre-commit)[native-inputs]: Add
python-setuptools and python-wheel. Remove input labels.
* gnu/packages/virtualization.scm (python-qemu-qmp,
python-transient)[native-inputs]: Add python-setuptools and
python-wheel.
* gnu/packages/xorg.scm (python-xcffib)[native-inputs]: Add
python-setuptools and python-wheel.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Change-Id: Id61cf8cdc47bd4c2871c0a9c8e9a5bfd51157df0
| Nicolas Graves |
2024-12-13 | gnu: python-alembic: Move to pyproject-build-system....* gnu/packages/databases.scm (python-alembic):
[build-system]: Move to pyproject-build-system.
[arguments]: Remove field, now uneeded.
Change-Id: I5907ff84412d867d094aae5fb4daa8481eb7f30c
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Nicolas Graves |
2024-12-13 | gnu: python-mysqlclient: Add missing inputs....* gnu/packages/databases.scm (python-mysqlclient)[native-inputs]: Add
python-setuptools and python-wheel.
Change-Id: Id0343382f1ef80b0299641e2b588e1687beeab30
| Ricardo Wurmus |
2024-12-13 | gnu: Add python-setuptools/python-wheel where necessary....Changes to pyproject-build-system require explicit dependency on
setuptools/wheel.
Change-Id: Icd7699fc1dc56e974ae7568f2ae916dbf876bea5
| Lars-Dominik Braun |
2024-12-13 | build-system/pyproject: Use python-sans-pip-wrapper as default-python....Also adds python-setuptools and python-wheel to relevant packages,
either to native-inputs or to propagated inputs if the pkg_resources
Python module is loaded at runtime.
* guix/build-system/pyproject.scm (default-python): Default to
python-sans-pip-wrapper.
Change-Id: I2d986c2225114f54459dd6bb360913106e52cdf4
| Lars-Dominik Braun |
2024-12-09 | gnu: duckdb: Build with for core extensions....DuckDB comes with a set of built-in extensions. This commit enables
those that don't require extra dependencies.
* gnu/packages/databases.scm (duckdb)[arguments]<#:configure-flags>: Add
BUILD_EXTENSIONS with autocomplete, fts, icu, json, parquet and tpch.
Change-Id: Ibac5efaeec04dcba98af1c497e75632166941fc2
| Ekaitz Zarraga |
2024-12-03 | gnu: python-fakeredis: Update to 2.26.1....* gnu/packages/databases.scm (python-fakeredis): Update to 2.26.1.
[arguments]: Do not run slow tests; add phases 'poetry-compatibility and
'start-redis.
[propagated-inputs]: Add python-typing-extensions.
[native-inputs]: Add redis.
Change-Id: I18ed122d9e5307d3d723cfc9ef0d51f120b4ccb5
Signed-off-by: Hilton Chain <hako@ultrarare.space>
| Ricardo Wurmus |
2024-12-03 | gnu: python-redis: Update to 5.2.0....* gnu/packages/databases.scm (python-redis): Update to 5.2.0.
[arguments]: Update list of tests to skip; add phase 'relax-requirements.
[native-inputs]: Add python-numpy.
Change-Id: I789c511fb4a516e6cdad06dba695af9bb89f562d
Signed-off-by: Hilton Chain <hako@ultrarare.space>
| Ricardo Wurmus |
2024-12-02 | gnu: redis: Add comment about upcoming license change....* gnu/packages/databases.scm (redis): Add a note with the package to be
aware of the upcoming non-free license change.
Change-Id: I60ef9bce81b6650d88f567e98c5bcf543a13082e
| Efraim Flashner |
2024-12-02 | gnu: redis: Update to 7.2.6....* gnu/packages/databases.scm (redis): Update to 7.2.6.
[arguments]<#:phases>: Update failing tests.
Change-Id: Ife107541697fda4f0928497560871f8ffb07d445
| Hilton Chain |
2024-11-23 | gnu: Respect --cores build argument in some python packages....Reported by Greg Hogan <code@greghogan.com> in #74445.
* gnu/packages/astronomy.scm (python-asdf-astropy, python-astropy,
python-photutils, python-poppy, python-regions, python-reproject,
python-sunpy, python-spectral-cube, python-stdatamodels, python-pysiaf,
python-sbpy, python-asdf-coordinates-schemas, python-roman-datamodels,
python-webbpsf, python-yt):
[arguments]<test-flags>: Adjust "-n" or "--numprocess" to respect
"--cores" build argument.
* gnu/packages/check.scm (python-crosshair): Likewise.
* gnu/packages/databases.scm (python-fastparquet, python-pycurl, awscli,
python-s3transfer): Likewise.
* gnu/packages/python-xyz.scm (python-glymur, python-zarr, python-dask):
Likewise.
Change-Id: Ifbc6435e4ad22b0ae822b485bccca41eaa165cc5
| Sharlatan Hellseher |
2024-11-14 | gnu: postgresql-10: Replace deprecated dependency....* gnu/packages/databases.scm (postgresql-10): Inherit postgresql-13
instead of 11.
Using the deprecated postgresql-11 package was causing warnings to be
printed on `guix pull`.
Change-Id: I36225ff2a1889f94cd5aabe229ee638793594abf
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| David Pflug |
2024-11-12 | gnu: postgresql-15: Update to 16.4. [security fixes]...This fixes CVE-2024-7348.
* /gnu/packages/databases.scm
(postgresql-15): Move from here...
(postgresql-16): ... to here.
[version]: Update to 16.4.
[source]: Adapt source and add patch.
[native-inputs]: Add pkg-config.
[inputs]: Add icu4c.
* gnu/packages/patches/postgresql-disable-normalize_exec_path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: I57771ebcf462bdeca73eda157274db089816fd12
| Nicolas Graves |
2024-11-12 | gnu: postgresql-14: Update to 14.13....* gnu/packages/databases.scm (postgresql-14): Update to 14.13.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Nicolas Graves |
2024-11-12 | gnu: postgresql-13: Update to 13.16. [security fixes]...This fixes CVE-2024-7348.
* gnu/packages/databases.scm (postgresql-13): Update to 13.16.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Nicolas Graves |
2024-10-28 | gnu: postgresql: Deprecate unsupported versions....Versions 10 and 11 are unsupported according to
https://www.postgresql.org/support/versioning/
postgresql-10 also has a CVE.
* doc/guix.texi: Change default value of postgresql-service-type's
postgresql field.
* gnu/packages/databases.scm (postresql-10, postgresql-11): Use
define-deprecated/public to warn users.
* gnu/services/databases.scm (postgresql-configuration): Change the
default value of postgresql-configuration-postgresql.
* gnu/tests/guix.scm (%guix-data-service-os): Change the default value
of postgresql.
Signed-off-by: Andreas Enge <andreas@enge.fr>
Change-Id: Ie8744c8e1f246e9b45ff5e29d4e98214de3ca66a
| Nicolas Graves |
2024-10-22 | gnu: python-sqlalchemy-2: Improve package style....Add missing input as seen python-team build
<https://ci.guix.gnu.org/build/6245544/log/raw>.
* gnu/packages/databases.scm (python-sqlalchemy-2): Improve packge
style. Shift order of the fields.
[arguments]<#:phases>: Remove all custom phases, swap tests deletion
and substitution with "--ignore" and "-k" options in <#:test-flags>.
[propagated-inputs]: Add python-greenlet.
[native-inputs]: Add python-cython and python-setuptools.
[description]: Fix indentation.
Change-Id: Ib1f145efe8d9b24aa069a4c616525855b278568b
| Sharlatan Hellseher |
2024-10-22 | gnu: python-sqlalchemy-2: Update to 2.0.36....* gnu/packages/databases.scm (python-sqlalchemy-2): Update to 2.0.36.
Change-Id: If290390a508f62a71770387a575efe379f171ff6
| Sharlatan Hellseher |
2024-10-20 | gnu: timescaledb: Ignore failing tests....* gnu/packages/databases.scm (timescaledb):
[arguments]<#:phases>: Add phase 'patch-failing-tests.
| Nicolas Graves |
2024-10-20 | gnu: timescaledb: Update to 2.16.1. [security fixes]...This fixes CVE-2023-25149.
* gnu/packages/databases.scm (timescaledb): Update to 2.16.1.
[arguments]<#:phases>: Remove comment and symlink trick in
'prepare-tests phase.
| Nicolas Graves |
2024-10-11 | gnu: duckdb: Update to 1.1.1. [security fixes]...This fixes CVE-2024-41672.
* gnu/packages/databases.scm (duckdb): Update to 1.1.1.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Nicolas Graves |
2024-09-15 | gnu: emacs-rec-mode: Update to 1.9.4....* gnu/packages/databases.scm (emacs-rec-mode): Update to 1.9.4.
Change-Id: Ie0ceea0c9953e4eefb5599c4cf7fa94ecd9ae081
| Nicolas Goaziou |
2024-09-01 | gnu: lmdb: Fix cross-compiling....* gnu/packages/databases.scm (lmdb)[arguments]: When cross-compiling use
the correct CC and AR to produce cross-compiled libraries.
Change-Id: Ie93fe88eff1da4949dfdbdedabc670fa56cbc1c9
| Efraim Flashner |
2024-08-31 | gnu: redis: Skip OOM score test....Since "daemon: Sacrifice builders on OOM." the default OOM score has changed
to 1000, which effictively render this test impossible to pass.
* gnu/packages/databases.scm (redis): Skip OOM score test.
Change-Id: I92ff49425faa755cd4d0a22a33bf8b1fea03d25a
| Josselin Poiret |
2024-08-31 | gnu: tdb: Add libxcrypt dependency....* gnu/packages/databases.scm (tdb): Add libxcrypt dependency.
Change-Id: If44722b61b9ed427665b5939a2c5f5ef35e78691
| Josselin Poiret |
2024-08-31 | gnu: sqlparse: Add bash-minimal to inputs....* gnu/packages/databases.scm (sqlparse)
[inputs]: New field.
Change-Id: Idb5ad3f056236104ac93b21b65e9cf96960c6be7
| Maxim Cournoyer |
2024-08-31 | gnu: sqitch: Add bash-minimal to inputs....* gnu/packages/databases.scm (sqitch)
[inputs]: Add bash-minimal. Remove labels.
Change-Id: If2471815342f5fa1ca299f4e7798cb5c1245a3b0
| Maxim Cournoyer |
2024-08-31 | gnu: mysql: Add bash-minimal to inputs....* gnu/packages/databases.scm (mysql)
[inputs]: Add bash-minimal.
Change-Id: I27645b599cd78806f54dd81cc41fbeb899437d33
| Maxim Cournoyer |
2024-08-31 | gnu: ephemeralpg: Add bash-minimal to inputs....* gnu/packages/databases.scm (ephemeralpg)
[inputs]: Add bash-minimal.
Change-Id: I7f1888b1413f14f1303829aa20e976ccf6d5b86e
| Maxim Cournoyer |
2024-08-31 | gnu: tdb: Build manpages....* gnu/packages/databases.scm (tdb)[native-inputs]: Add docbook-xsl and
libxslt.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Bruno Victal |
2024-08-28 | gnu: python-pyarrow: Fix build....Resolve regression introduced in
c2d172fc74dcb34a34f26e51d7a01fffa1442ea7 as seen in CI
<https://ci.guix.gnu.org/build/5481081/log/raw>.
* gnu/packages/databases.scm (python-pyarrow)
[arguments]: <#:phases>: Add 'set-version phase.
In 'set-pyarrow-build-options phase sort environment variables
alphabetically, add PYARROW_CMAKE_OPTIONS, PYARROW_PARALLEL,
PYARROW_WITH_HDFS.
Change-Id: I85bb78e49fa207d19080e15db09d9764c7f84c25
| Sharlatan Hellseher |
2024-08-28 | gnu: python-pyarrow: Refresh package style....* gnu/packages/databases.scm: Apply new package style.
Change-Id: I2f26ee6569f9d8a5730757ca7a9e3d612ac20f38
| Sharlatan Hellseher |
2024-08-26 | gnu: apache-arrow: Update to 17.0.0....* gnu/packages/databases.scm (apache-arrow): Update to 17.0.0.
Change-Id: If7ad15cbe1070a9132e921c931083deae527a27e
| Ricardo Wurmus |
2024-08-17 | gnu: sqlitebrowser: Update to 3.13.0....* gnu/packages/databases.scm (sqlitebrowser): Update to 3.13.0.
Change-Id: I31e8febfe3d5dd61b27e3f8b4404a529262cea5c
| jgart |
2024-07-25 | gnu: go-github-com-google-go-cmp-cmp: Rename variable....* gnu/packages/golang.scm (go-github-com-google-go-cmp-cmp): Rename
variable to go-github-com-google-go-cmp, which reflects go.mod import
path and improves importer performance.
(go-github-com-zclconf-go-cty, go-golang-org-x-vuln,
go-google-golang-org-protobuf, go-gotest-tools-assert,
go-gotest-tools-internal-source, go-gotest-tools-internal-format,
gofumpt, gopls, gotestsum): Swap go-github-com-google-go-cmp-cmp to
go-github-com-google-go-cmp in inputs, propagated-inputs or
native-inputs.
* gnu/packages/golang-check.scm (go-github-com-frankban-quicktest,
go-github-com-google-go-cmdtest): Likewise.
* gnu/packages/golang-web.scm (go-github-com-aws-aws-sdk-go-v2,
go-github-com-aws-aws-sdk-go-v2-config, go-github-com-aws-smithy-go,
go-github-com-go-jose-go-jose-v3,
go-github-com-makeworld-the-better-one-go-gemini,
go-golang-org-x-oauth2, go-gopkg-in-square-go-jose-v2): Likewise.
* gnu/packages/golang-xyz.scm (go-github-com-goccy-go-yaml): Likewise.
* gnu/packages/check.scm (actionlint): Likewise.
* gnu/packages/databases.scm (sqls): Likewise.
* gnu/packages/ipfs.scm (go-github-com-ipld-go-ipld-prime,
go-github-com-whyrusleeping-cbor-gen): Likewise.
* gnu/packages/web.scm (go-github-com-itchyny-gojq): Likewise.
Change-Id: Ie6eeba936f7da404d70fbbaad34f5b43aec4e05b
| Sharlatan Hellseher |