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2024-08-26gnu: r-hmmcopy: Update to 1.46.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hmmcopy): Update to 1.46.0. Change-Id: I26c091fe4af549b01c98aac0a1fcdb058ff4ea71
2024-08-26gnu: Add r-hmmcopy.Spencer King
* gnu/packages/bioconductor.scm (r-hmmcopy): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Iface547e865609427c356277edc904f3aec386d8
2024-08-26gnu: r-omnipathr: Update to 3.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.12.3. Change-Id: I8ecd13d0d28003bb4ceb54b2c011fe6e8162df66
2024-08-26gnu: r-bgeedb: Update to 2.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.30.1. Change-Id: I31f54552b1e12315657f5bd9b8dbef32f3a20066
2024-08-26gnu: r-universalmotif: Update to 1.22.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.2. Change-Id: I71e3f29a2ec4b15fb6758b4b972d17b5d1f502c8
2024-08-26gnu: r-gdsfmt: Update to 1.40.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.40.1. Change-Id: Ib9f585e2e2ad6ebc883a626da2138caffc909613
2024-08-26gnu: r-xcms: Update to 4.2.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.3. Change-Id: I17355573c0af40aa8b021da3e46a99a9709b411b
2024-08-26gnu: r-clusterprofiler: Update to 4.12.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.12.5. Change-Id: I05468212919db2e385cd4bd604891b7deca4110f
2024-08-26gnu: r-dose: Update to 3.30.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.4. [propagated-inputs]: Remove r-hdo-db and r-yulab-utils. Change-Id: Ia8ed1de853bd80ad4c482667c1b3547b113410ae
2024-08-26gnu: r-gosemsim: Update to 2.30.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.30.2. [propagated-inputs]: Add r-dbi, r-digest, r-httr2, and r-r-utils. Change-Id: Idb915ec70b79f7464011e94256f68e940d63764f
2024-08-26gnu: r-ensembldb: Update to 2.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.1. Change-Id: I8d03eb64092c04e5a05f5371e1d3589a2efcd4f1
2024-08-26gnu: r-dmrcate: Update to 3.0.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.8. Change-Id: I62421e4df317cf33c08bdd4f65221c255d4c2dc7
2024-08-26gnu: r-nmf: Update to 0.28.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.28. Change-Id: I839cc9346bd06fb9a430a6f4754fbe6bc083f7eb
2024-08-17gnu: r-dmrseq: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.24.1. Change-Id: I22fb49eee056e0dd5306fec4575fcb38cbe916aa
2024-08-17gnu: r-bgeecall: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.20.1. [propagated-inputs]: Add r-txdbmaker. Change-Id: Ia51c1ccdb0e49d8dc74a61f605f00c86718bc1f8
2024-08-17gnu: r-mscoreutils: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.16.1. Change-Id: I233a01625f223c571dae863c977825d4a2909ee7
2024-08-17gnu: r-scater: Update to 1.32.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scater): Update to 1.32.1. Change-Id: I0232d463f243505a9b3706d64e6666eb245ceb1c
2024-08-17gnu: r-hdf5array: Update to 1.32.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.32.1. Change-Id: Iebab45185f6f1fe3e6919a1e70e45127d9f1124f
2024-08-17gnu: r-s4vectors: Update to 0.42.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.42.1. Change-Id: I58dc50344c5eb477da9d4ddd4447bcb41f456037
2024-08-17gnu: r-multiassayexperiment: Update to 1.30.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.30.3. Change-Id: Iabbd0c74d7515f8f166827b8b99b2ac49b271c13
2024-08-17gnu: r-universalmotif: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.1. Change-Id: I60a617d120e5da046decb491b7641f1e10aac0cb
2024-08-17gnu: r-clusterprofiler: Update to 4.12.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.12.2. Change-Id: I17d837fb314c26fcb26c13240a01c91bc2da9797
2024-08-17gnu: r-enrichplot: Update to 1.24.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.24.2. Change-Id: I188e7e908a09337d4bacf4802b1557ddd31048f3
2024-08-17gnu: r-dose: Update to 3.30.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.2. Change-Id: Ic07fab82efcbda004d6c7ff21d4ed7b49cc426fb
2024-08-17gnu: r-chippeakanno: Update to 3.38.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.38.1. Change-Id: Ia4c89074674f3473e11f3b9e1f9ed828701591f6
2024-08-17gnu: r-qfeatures: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-qfeatures): Update to 1.14.2. Change-Id: I93c4fc00d19b18a1e0981f21dd0950d1e1a81f37
2024-08-17gnu: r-seqarray: Update to 1.44.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-seqarray): Update to 1.44.1. Change-Id: I06bb0b45d1a4299e835f7a18c7ed70d847bdb565
2024-08-17gnu: r-msa: Update to 1.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-msa): Update to 1.36.1. Change-Id: I91665d8ff4cd7570b5bcad27ff132611a09b8ecc
2024-08-17gnu: r-limma: Update to 3.60.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-limma): Update to 3.60.4. Change-Id: Iaaf9317ab3921070f5b8e06a7948b42575bbe00b
2024-08-17gnu: r-raggedexperiment: Update to 1.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-raggedexperiment): Update to 1.28.1. Change-Id: If7e8b60435413acda999f055bf9f104929e7f50f
2024-08-17gnu: r-edger: Update to 4.2.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-edger): Update to 4.2.1. Change-Id: Ia8cb57ada3f036f7fe45972ad1d3a8ff2e53c27b
2024-08-17gnu: r-iranges: Update to 2.38.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.38.1. Change-Id: I95d34fb3f339590c1980b7a77093835baa0e0136
2024-08-17gnu: r-dmrcate: Update to 3.0.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.5. Change-Id: I88768682f65b821e188f29c4dfee94927040cbbd
2024-08-17gnu: r-degreport: Update to 1.40.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-degreport): Update to 1.40.1. Change-Id: I35e7284270c81cd10178e7d848dfa5872645405d
2024-08-17gnu: r-anvil: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.16.1. Change-Id: Ief1b321d44a3bd534c6107c4434957c0de2dd977
2024-08-17gnu: r-activepathways: Update to 2.0.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.5. Change-Id: Ia67d411d6f07bdf3c733f4eab5527f3706f3134d
2024-08-17gnu: r-metap: Update to 1.11.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-metap): Update to 1.11. Change-Id: I6bf89da4201256ae73206303234a275c011f202d
2024-07-17gnu: r-tximeta: Update to 1.22.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.22.1. Change-Id: I213ab8df594f91a9366a9b3fc7498100a264c40f
2024-07-17gnu: r-sparsearray: Update to 1.4.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.4.8. Change-Id: I58f280938a8436c9ca4ce16f28195aabb4c61da8
2024-07-17gnu: r-s4arrays: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.4.1. Change-Id: Ic271e88efc4bebf001a34147ab99d5cac76899ab
2024-07-17gnu: r-multiassayexperiment: Update to 1.30.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.30.2. Change-Id: Iad9beba82d385c9a9785f243b39238fa7c6cca8c
2024-07-17gnu: r-biocstyle: Update to 2.32.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.32.1. Change-Id: Ic9b3a8596c64c44930fa591527a67c9d80a3b8e5
2024-07-17gnu: r-opencyto: Update to 2.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.16.1. Change-Id: Ica1c5d9cdc5b89fd8d66137deaa37af6405c0e93
2024-07-17gnu: r-xcms: Update to 4.2.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.2. Change-Id: I13a9d324aacd3edc2c9e4f64df68d8efd22a3ca1
2024-07-17gnu: r-dose: Update to 3.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.1. Change-Id: I7839680a6cc3b11083c61c05c392435b985bd522
2024-07-17gnu: r-residualmatrix: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-residualmatrix): Update to 1.14.1. Change-Id: Ibeed009e6ae9892dabb90e714c014f5df0748a3d
2024-07-17gnu: r-goseq: Update to 1.56.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.56.0. Change-Id: I96328b6c9ee60f8ecfc218861da8343c15979270
2024-07-17gnu: r-apeglm: Update to 1.26.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.26.1. Change-Id: I6feea7900ef40e81cecfa48a6b1bc14ebbafc38c
2024-07-17gnu: r-qfeatures: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-qfeatures): Update to 1.14.1. [propagated-inputs]: Add r-reshape2. Change-Id: Id30163d56abcb36778f32279418c10e63a2866b9
2024-07-17gnu: r-oligo: Update to 1.68.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.68.2. Change-Id: Ieb77c06575edf036355b3cb0085f3dfae8bfb9c5
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