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2024-08-26gnu: r-dose: Update to 3.30.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.4. [propagated-inputs]: Remove r-hdo-db and r-yulab-utils. Change-Id: Ia8ed1de853bd80ad4c482667c1b3547b113410ae
2024-08-26gnu: r-gosemsim: Update to 2.30.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.30.2. [propagated-inputs]: Add r-dbi, r-digest, r-httr2, and r-r-utils. Change-Id: Idb915ec70b79f7464011e94256f68e940d63764f
2024-08-26gnu: r-ensembldb: Update to 2.28.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.1. Change-Id: I8d03eb64092c04e5a05f5371e1d3589a2efcd4f1
2024-08-26gnu: r-dmrcate: Update to 3.0.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.8. Change-Id: I62421e4df317cf33c08bdd4f65221c255d4c2dc7
2024-08-26gnu: Add r-shinydisconnect.King, Spencer
* gnu/packages/cran.scm (r-shinydisconnect): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Change-Id: Ibf90c8902b6e6e6c45b7bdb921f310f14ac6b803
2024-08-26committer: Avoid // in xpath.Ricardo Wurmus
When using // we assume that the package definition's S-expression is a nesting of proper lists. This is not guaranteed to be true, because a package definition may contain alists. By using an explicit path to the field of interest we avoid recursion through all child nodes, thus avoiding child nodes that are more likely to contain improper lists. * etc/committer.scm.in (change-commit-message): Replace // with a path for the PACKAGE symbol. Change-Id: Idefaec9f5c3538484432e15a5865a68fc16e7369
2024-08-26gnu: r-desctools: Update to 0.99.56.Ricardo Wurmus
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.56. Change-Id: I00956252d699c06408818cced7c0d04e409c61c7
2024-08-26gnu: r-fdrtool: Update to 1.2.18.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.18. Change-Id: I199c8f82b86c1b8cc40f5dffd6c55f1ff4b727e0
2024-08-26gnu: r-rcppeigen: Update to 0.3.4.0.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.4.0.2. Change-Id: I3f9ddfdeb14da7bd42bd6e46389da2ec11dc9940
2024-08-26gnu: r-minqa: Update to 1.2.8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-minqa): Update to 1.2.8. Change-Id: Ibdf083085acf888be22d807ea77f2b4caf28de44
2024-08-26gnu: r-robust: Update to 0.7-5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-robust): Update to 0.7-5. Change-Id: I14ceb59373e95295b2bb90712258571226f76205
2024-08-26gnu: r-rrcov: Update to 1.7-6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-6. Change-Id: I21b0a480e840999d554dfce503a1e2e9137ea455
2024-08-26gnu: r-pcapp: Update to 2.0-5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-5. Change-Id: I4b4ee28b6777e41fc200e8bad748444b7a34f0e8
2024-08-26gnu: r-robustbase: Update to 0.99-4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-4. Change-Id: I98104ac5700de8e50fcd8dcbcf0745845c809a9e
2024-08-26gnu: r-fastica: Update to 1.2-5.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-5.1. Change-Id: I379e9cb4f704e4c8187152762d65f034fd42bf5a
2024-08-26gnu: r-rann: Update to 2.6.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rann): Update to 2.6.2. Change-Id: I4be5c6a4f63f5bd572d8b35637ee68c65c89a428
2024-08-26gnu: r-sfsmisc: Update to 1.1-19.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-19. Change-Id: Ie8c3682f4b0bf2cc98de7753b0cbed82f6303b48
2024-08-26gnu: r-mvtnorm: Update to 1.2-6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-6. Change-Id: I49def37b078afadc47aaba571fd6ee6a2399f09c
2024-08-26gnu: r-rmarkdown: Update to 2.28.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.28. Change-Id: Id76c14ee9db4e49ecafe5fe0f5e45c0212ad1333
2024-08-26gnu: r-digest: Update to 0.6.37.Ricardo Wurmus
* gnu/packages/statistics.scm (r-digest): Update to 0.6.37. Change-Id: I9445786cc703d704c36cf6c56d06cb53f23505cc
2024-08-26gnu: r-paws-common: Update to 0.7.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-paws-common): Update to 0.7.5. Change-Id: I074d17393bd5ec5bf4ecd860ac0ab0f08bfada04
2024-08-26gnu: r-opencpu: Update to 2.2.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.13. Change-Id: Ia783a7a278852a5bc0136f015624b1c0283a3ac3
2024-08-26gnu: r-webutils: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-webutils): Update to 1.2.1. Change-Id: I680a8ecb149289581ef3cf53fab575b5036191b2
2024-08-26gnu: r-intervals: Update to 0.15.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-intervals): Update to 0.15.5. Change-Id: I587ce6595d3d06177a05f7c719996a6977e09aed
2024-08-26gnu: r-maldiquant: Update to 1.22.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.3. Change-Id: I4a08996f8df6d0c746636cfbdbe9fcbaf234749d
2024-08-26gnu: r-qtl: Update to 1.70.Ricardo Wurmus
* gnu/packages/cran.scm (r-qtl): Update to 1.70. Change-Id: Ic181aaa70c5396e3057ef838a235d36ed19bc31e
2024-08-26gnu: r-hunspell: Update to 3.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-hunspell): Update to 3.0.4. Change-Id: Id818aece69eae53bc83b1a14a881a028bb4b5951
2024-08-26gnu: r-flexsurv: Update to 2.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-flexsurv): Update to 2.3.2. Change-Id: Ia38e29f6fbdafa6e0834bc9d46f7a99e0491c65d
2024-08-26gnu: r-spatstat-utils: Update to 3.1-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.1-0. Change-Id: I2a363b32aee2fa9fc21af493ce6758144833f8bd
2024-08-26gnu: r-spatstat-explore: Update to 3.3-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.3-2. Change-Id: Ied82693302bf66b32e24becc71521a4886408118
2024-08-26gnu: r-bdgraph: Update to 2.73.Ricardo Wurmus
* gnu/packages/cran.scm (r-bdgraph): Update to 2.73. Change-Id: I79671b10863b7f24953a7cd410f237297c623f7f
2024-08-26gnu: r-openmx: Update to 2.21.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-openmx): Update to 2.21.12. Change-Id: I7aee12e733193f4b63fce6149c055dd308a5d920
2024-08-26gnu: r-poibin: Update to 1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-poibin): Update to 1.6. Change-Id: I697841e0d5baf8ef175316f32261438547186467
2024-08-26gnu: r-caretensemble: Update to 4.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-caretensemble): Update to 4.0.0. [propagated-inputs]: Remove r-digest, r-gridextra, and r-plyr; add r-patchwork and r-rlang. Change-Id: I3eccdbc246084030d767451996d9ef70276247e8
2024-08-26gnu: r-yulab-utils: Update to 0.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.6. [propagated-inputs]: Remove r-memoise; add r-httr2. Change-Id: Id3b1958a6eddd3ea2dbc6f5f3e844388220b06d5
2024-08-26gnu: r-rms: Update to 6.8-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rms): Update to 6.8-2. Change-Id: I75e83272049235815680e32cc0a05efccd1b417f
2024-08-26gnu: r-gmp: Update to 0.7-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-gmp): Update to 0.7-5. Change-Id: I874e46d94cfb9ec9c0d9a12a17dd70e488a91b2b
2024-08-26gnu: r-stabledist: Update to 0.7-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-stabledist): Update to 0.7-2. Change-Id: Ic046fcf71118c9050d427de24ce147e04542c9ae
2024-08-26gnu: r-biocmanager: Update to 1.30.24.Ricardo Wurmus
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.24. Change-Id: Ie55c896b11b7c364dbbfd80327722c7ab0d0851d
2024-08-26gnu: r-ncdf4: Update to 1.23.Ricardo Wurmus
* gnu/packages/cran.scm (r-ncdf4): Update to 1.23. Change-Id: I252696f5208b6fe8127393aed40b815924e23296
2024-08-26gnu: r-rcppparallel: Update to 5.1.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.9. Change-Id: I218f03cf3ad85b0c34a662e9241438fcc30018c3
2024-08-26gnu: r-emmeans: Update to 1.10.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.10.4. Change-Id: Iffbac8a82bd0c1b0f29db3853e92eb09f586dcbd
2024-08-26gnu: r-golem: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-golem): Update to 0.5.0. Change-Id: I349cef6afb7fb87c187fd8bb458379d93bf89389
2024-08-26gnu: r-rjags: Update to 4-16.Ricardo Wurmus
* gnu/packages/cran.scm (r-rjags): Update to 4-16. Change-Id: I9232f6cb3b0e6cfb5f130721ab445f1d608ce7c6
2024-08-26gnu: r-rapiclient: Update to 0.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-rapiclient): Update to 0.1.6. Change-Id: I9e0304842b19d20c19382057b95b846a2a7f727c
2024-08-26gnu: r-rio: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rio): Update to 1.2.2. Change-Id: Ie5ec88ad20cfd8a8b2171d2aa7e7bfd8dbb45112
2024-08-26gnu: r-arules: Update to 1.7-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-arules): Update to 1.7-8. Change-Id: I14e917a3787d48eb04bc02d488bbeaf144b56395
2024-08-26gnu: r-expm: Update to 1.0-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-expm): Update to 1.0-0. Change-Id: I9f680588617eb3ba7ec7841ee04e39419e0b96fc
2024-08-26gnu: r-fbasics: Update to 4041.97.Ricardo Wurmus
* gnu/packages/cran.scm (r-fbasics): Update to 4041.97. Change-Id: I682f657c8563965b3c4cce308f03716ae44c5c00
2024-08-26gnu: r-nestedcv: Update to 0.7.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-nestedcv): Update to 0.7.10. Change-Id: I17f803ec880284bd552f1cb114cec2944cd2606d
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