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2019-09-28gnu: r-rhtslib: Update to 1.16.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.2.
2019-09-28gnu: r-rsamtools: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.1.
2019-09-28gnu: r-iranges: Update to 2.18.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.3.
2019-09-28gnu: r-dt: Update to 0.9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): Update to 0.9.
2019-09-28gnu: r-lambda-r: Update to 1.2.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.4.
2019-09-28gnu: r-pkgconfig: Update to 2.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pkgconfig): Update to 2.0.3.
2019-09-28gnu: r-devtools: Update to 2.2.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-devtools): Update to 2.2.1. [propagated-inputs]: Add r-rlang.
2019-09-28gnu: r-microbenchmark: Update to 1.4-7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-7.
2019-09-28gnu: r-knitr: Update to 1.25.Ricardo Wurmus
* gnu/packages/statistics.scm (r-knitr): Update to 1.25.
2019-09-28gnu: r-digest: Update to 0.6.21.Ricardo Wurmus
* gnu/packages/statistics.scm (r-digest): Update to 0.6.21.
2019-09-28gnu: r-mgcv: Update to 1.8-29.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-29.
2019-09-28gnu: r-assertable: Update to 0.2.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-assertable): Update to 0.2.7.
2019-09-28gnu: r-parameters: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-parameters): Update to 0.2.0.
2019-09-28gnu: r-uwot: Update to 0.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-uwot): Update to 0.1.4.
2019-09-28gnu: r-optparse: Update to 1.6.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-optparse): Update to 1.6.4.
2019-09-28gnu: r-spdep: Update to 1.1-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-spdep): Update to 1.1-3.
2019-09-28gnu: r-sf: Update to 0.8-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-sf): Update to 0.8-0.
2019-09-28gnu: r-spdata: Update to 0.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-spdata): Update to 0.3.2.
2019-09-28gnu: r-tidytree: Update to 0.2.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.8.
2019-09-28gnu: r-rcpphnsw: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.2.0.
2019-09-28gnu: r-rcppannoy: Update to 0.0.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.13.
2019-09-28gnu: r-bayestestr: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-bayestestr): Update to 0.3.0.
2019-09-28gnu: r-raster: Update to 3.0-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-raster): Update to 3.0-7.
2019-09-28gnu: r-sjmisc: Update to 2.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.2. [propagated-inputs]: Add r-tidyselect.
2019-09-28gnu: r-shinyace: Update to 0.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-shinyace): Update to 0.4.1.
2019-09-28gnu: r-ttr: Update to 0.23-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-ttr): Update to 0.23-5. [native-inputs]: Remove gfortran.
2019-09-28gnu: r-tinytex: Update to 0.16.Ricardo Wurmus
* gnu/packages/cran.scm (r-tinytex): Update to 0.16.
2019-09-28gnu: r-recipes: Update to 0.1.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 0.1.7.
2019-09-28gnu: r-curl: Update to 4.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-curl): Update to 4.2.
2019-09-28gnu: r-htmltable: Update to 1.13.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-htmltable): Update to 1.13.2.
2019-09-28gnu: r-callr: Update to 3.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-callr): Update to 3.3.2.
2019-09-28gnu: r-ellipsis: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ellipsis): Update to 0.3.0.
2019-09-28gnu: Add stapler.Arun Isaac
* gnu/packages/pdf.scm (stapler): New variable.
2019-09-27compile: Fix race condition on completion progress.Eric Bavier
This prevent a race condition where multiple compilation threads could report the same progress. * guix/build/compile.scm (compile-files)<completed>: Rename to... <progress>: ...this. Increment in same mutex region as the compilation is reported.
2019-09-28gnu: z3: Update to 4.8.6.Tobias Geerinckx-Rice
* gnu/packages/maths.scm (z3): Update to 4.8.6.
2019-09-28gnu: xtensor: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (xtensor)[home-page]: Use HTTPS.
2019-09-28gnu: xtensor: Update to 0.20.9.Tobias Geerinckx-Rice
* gnu/packages/algebra.scm (xtensor): Update to 0.20.9.
2019-09-28gnu: xtl: Update to 0.6.7.Tobias Geerinckx-Rice
* gnu/packages/cpp.scm (xtl): Update to 0.6.7.
2019-09-28gnu: smu: Don't use unstable tarball.Tobias Geerinckx-Rice
* gnu/packages/markup.scm (smu)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2019-09-28gnu: smu: Update to 1.5.Tobias Geerinckx-Rice
* gnu/packages/markup.scm (smu): Update to 1.5.
2019-09-28gnu: youtube-viewer: Update to 3.5.8.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-viewer): Update to 3.5.8.
2019-09-28gnu: ubridge: Update to 0.9.16.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (ubridge): Update to 0.9.16.
2019-09-27gnu: dealii: Update to 9.1.1.Eric Bavier
* gnu/packages/maths.scm (dealii): Update to 9.1.1. [source]: Remove patch no longer needed. * gnu/local.mk (dist_patch_DATA): ditto. * gnu/packages/patches/dealii-mpi-deprecations.patch: Delete it.
2019-09-27gnu: Add emacs-skeletor.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-skeletor): New variable.
2019-09-27gnu: nginx: Update to 1.17.4.Marius Bakke
* gnu/packages/web.scm (nginx): Update to 1.17.4.
2019-09-27gnu: mbedtls-apache: Update to 2.16.3.Marius Bakke
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.16.3.
2019-09-27gnu: WebKitGTK: Update to 2.26.1.Marius Bakke
* gnu/packages/webkit.scm (webkitgtk-2.24): Rename to ... (webkitgtk-2.26): ... this. Update to 2.26.1. [inputs]: Add BUBBLEWRAP, LIBSECCOMP, LIBWPE, WPEBACKEND-FDO, and XDG-DBUS-PROXY. * gnu/packages/gnome.scm (eolie, epiphany)[inputs]: Adjust for changed variable name. * gnu/packages/web-browsers.scm (next-gtk-webkit)[inputs]: Likewise.
2019-09-27gnu: Add xdg-dbus-proxy.Marius Bakke
* gnu/packages/glib.scm (xdg-dbus-proxy): New public variable.
2019-09-27gnu: Add wpebackend-fdo.Marius Bakke
* gnu/packages/webkit.scm (wpebackend-fdo): New public variable.
2019-09-27gnu: Add libwpe.Marius Bakke
* gnu/packages/webkit.scm (libwpe): New public variable.
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