| Age | Commit message (Expand) | Author |
|---|
| 2021-12-10 | gnu: Add rust-argh-derive-0.1....* gnu/packages/crates-io (rust-argh-derive-0.1): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Petr Hodina |
| 2021-12-10 | gnu: Add rust-argh-shared-0.1....* gnu/packages/crates-io.scm (rust-argh-shared-0.1): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Petr Hodina |
| 2021-12-09 | gnu: opam: Update to 2.1.2....* gnu/packages/ocaml.scm (opam): Update to 2.1.2.
| Julien Lepiller |
| 2021-12-09 | gnu: pplacer: Fix build....* gnu/packages/bioinformatics.scm (pplacer)[inputs]: Replace gsl with
gsl-static.
* gnu/packages/ocaml.scm (ocaml4.07-gsl-1)[inputs]: Same.
| Efraim Flashner |
| 2021-12-09 | gnu: Add gsl-static....* gnu/packages/maths.scm (gsl-static): New variable.
| Efraim Flashner |
| 2021-12-09 | gnu: python-dendropy: Skip additional test....* gnu/packages/bioinformatics.scm (python-dendropy)[arguments]: Adjust
custom 'skip-broken-tests phase to skip additional test.
| Efraim Flashner |
| 2021-12-09 | gnu: mumi: Update to 0.0.1-6.8a45281....* gnu/packages/mail.scm (mumi): Update to 0.0.1-6.8a45281.
[arguments]: Remove trailing #T.
| Ricardo Wurmus |
| 2021-12-09 | gnu: python-rich: Remove optional input ipywidgets....* gnu/packages/python-xyz.scm (python-rich)[propagated-inputs]: Remove
python-ipywidgets.
| Ricardo Wurmus |
| 2021-12-09 | gnu: r-minimal: Remove extraneous references....* gnu/packages/statistics.scm (r-minimal)[arguments]: Remove references to
native build-time tools.
| Ricardo Wurmus |
| 2021-12-09 | gnu: uBlock Origin: Update to 1.39.2....* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.39.2.
| Marius Bakke |
| 2021-12-09 | gnu: ungoogled-chromium: Update to 96.0.4664.93-1....* gnu/packages/chromium.scm (%chromium-version): Set to 96.0.4664.93.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
| Marius Bakke |
| 2021-12-09 | gnu: imp: Build with default cmake....* gnu/packages/bioinformatics.scm (imp)[arguments]: Remove cmake flag.
| Efraim Flashner |
| 2021-12-09 | gnu: repeat-masker: Update to 4.1.2-p1....* gnu/packages/bioinformatics.scm (repeat-masker): Update to 4.1.2-p1.
| Ricardo Wurmus |
| 2021-12-09 | gnu: metabat: Update to 2.15....* gnu/packages/bioinformatics.scm (metabat): Update to 2.15.
[source]: Remove patch.
[build-system]: Use cmake-build-system.
[arguments]: Adjust to new build system.
* gnu/packages/patches/metabat-fix-compilation.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
| Ricardo Wurmus |
| 2021-12-09 | gnu: python2-scikit-learn: Disable one more test....* gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]: Do not
inherit; remove obsolete 'make-files-writable phase; disable one more failing
test in 'check phase.
| Ricardo Wurmus |
| 2021-12-09 | gnu: seek: Update to 1-1.196ed4c....* gnu/packages/bioinformatics.scm (seek): Update to 1-1.196ed4c.
[source]: Fetch from github.
[build-system]: Use cmake-build-system.
[arguments]: Remove all custom phases; replace 'check phase; disable tests;
set configure flags.
[inputs]: Add apache-thrift:include, apache-thrift:lib, and python.
[native-inputs]: Remove autoconf, automake, and perl; add pkg-config.
| Ricardo Wurmus |
| 2021-12-09 | gnu: libsvm: Install header and library....* gnu/packages/machine-learning.scm (libsvm)[arguments]: Add build phase
'build-lib; also install header file and shared library in the 'install phase.
| Ricardo Wurmus |
| 2021-12-09 | gnu: miso: Update to 0.5.4-1.b714021....* gnu/packages/bioinformatics.scm (miso): Update to 0.5.4-1.b714021.
[source]: Fetch via git; simplify snippet.
[inputs]: Replace samtools with samtools-1.2.
[home-page]: Update to new location.
| Ricardo Wurmus |
| 2021-12-09 | gnu: Add samtools-1.2....* gnu/packages/bioinformatics.scm (samtools-1.2): New variable.
| Ricardo Wurmus |
| 2021-12-09 | gnu: Add htslib-for-samtools-1.2....* gnu/packages/bioinformatics.scm (htslib-for-samtools-1.2): New variable.
| Ricardo Wurmus |
| 2021-12-09 | gnu: python2-scipy: Override native inputs....* gnu/packages/python-science.scm (python2-scipy)[native-inputs]: Override;
replace gfortran with gfortran-7; add gcc-7.
| Ricardo Wurmus |
| 2021-12-09 | gnu: python2-matplotlib: Fix mpl_toolkits module....* gnu/packages/python-xyz.scm (python2-matplotlib)[arguments]: Add phase
'create-init-file; restore 'sanity-check phase.
| Ricardo Wurmus |
| 2021-12-09 | gnu: Add gfortran-7....* gnu/packages/gcc.scm (gfortran-7): New variable.
| Ricardo Wurmus |
| 2021-12-09 | gnu: emacs-evil-magit: Remove deprecated package....* gnu/packages/emacs-xyz.scm (emacs-evil-magit): Delete variable.
evil-magit has been consolidated into evil-collection. The package has been
removed from MELPA since February. See here:
<https://github.com/emacs-evil/evil-magit>.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| jgart via Guix-patches via |
| 2021-12-09 | gnu: Add emacs-dpd....* gnu/packages/emacs-xyz.scm (emacs-dpd): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Andrew Tropin |
| 2021-12-09 | gnu: valeronoi: Update to 0.1.6....* gnu/packages/engineering.scm (valeronoi): Update to 0.1.6.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Petr Hodina |
| 2021-12-08 | gnu: tiramisu: Update to 2.0.20211107....* gnu/packages/gnome-xyz.scm (tiramisu): Update to 2.0.20211107.
[native-inputs]: Add vala.
Signed-off-by: Leo Famulari <leo@famulari.name>
| terramorpha |
| 2021-12-09 | gnu: isc-dhcp: Update bundled BIND to 9.11.36 [fixes CVE-2021-25219]....* gnu/packages/admin.scm (isc-dhcp)[inputs]:
Update bundled BIND to 9.11.36.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
| Leo Famulari |
| 2021-12-09 | gnu: bind: Update to 9.16.23 [fixes CVE-2021-25218, CVE-2021-25219]....* gnu/packages/dns.scm (isc-bind): Update to 9.16.23.
[source]: Add patch.
* gnu/packages/patches/bind-re-add-attr-constructor-priority.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
| Tobias Geerinckx-Rice |
| 2021-12-08 | Revert "installer: Make LUKS2 the default format for encrypted devices"...This reverts commit a82e9f45fd9f7c67123b7064c60065281035c744 at the
author's request. We are not quite ready to boot all resulting
systems.
See <https://logs.guix.gnu.org/guix/2021-12-08.log#231815>.
| Tobias Geerinckx-Rice |
| 2021-12-08 | gnu: python-slepc4py: Update to 3.16.1....This is a followup 5b4d1e57b6d4931f6ee2a50abf84222fe015d045.
* gnu/packages/maths.scm (slepc-openmpi)[inputs]: Move ARPACK-NG-OPENMPI to...
[propagated-inputs]: ... here.
(python-slepc4py): Update to 3.16.1.
| Ludovic Courtès |
| 2021-12-08 | gnu: python-petsc4py: Update to 3.16.1....This is a followup to 07ac13a26a0d7c8319afb42c55fc2116ec44668f.
* gnu/packages/maths.scm (python-petsc4py): Update to 3.16.1.
| Ludovic Courtès |
| 2021-12-08 | gnu: geeqie: Fix X11 error at startup....Fixes <https://issues.guix.gnu.org/52089>.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.
Patch provided by John Kehayias <john.kehayias@protonmail.com>.
* gnu/packages/patches/geeqie-clutter.patch: New file.
* gnu/packages/image-viewers.scm (geeqie)[sources]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
| Ludovic Courtès |
| 2021-12-08 | bash completion: Complete ‘guix shell -f’....* etc/completion/bash/guix (_guix_complete): Suggest a file name
following ‘guix shell […] -f’.
| Tobias Geerinckx-Rice |
| 2021-12-08 | gnu: Add realmd....* gnu/packages/admin.scm (realmd): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Petr Hodina |
| 2021-12-08 | gnu: go-github-com-alcortesm-tgz: Don't reset gzip timestamps....The tgz files are committed test fixtures, so don't reset their timestamps.
* gnu/packages/golang.scm (go-github-com-alcortesm-tgz)[arguments]:
Remove 'make-git-checkout-writable' phase. Delete 'reset-gzip-timestamps' phase
instead.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Sarah Morgensen |
| 2021-12-08 | gnu: Remove go-gopkg.in-check.v1....This package is a duplicate of go-gopkg-in-check-v1 in golang.scm,
has no binaries, and has no dependents, so remove it.
* gnu/packages/check.scm (go-gopkg.in-check.v1): Remove variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Sarah Morgensen |
| 2021-12-08 | gnu: mumps: Allow compilation with GCC 10....Following the suggestion at
<https://community.freefem.org/t/compline-on-macos-10-15-6/543>.
* gnu/packages/maths.scm (mumps)[arguments]: In 'configure' phase, add
'-fallow-argument-mismatch' to 'OPTF'.
| Ludovic Courtès |
| 2021-12-08 | maint: Don't require unsupported packages such as GNOME on i686-linux....* etc/release-manifest.scm (%system-manifest): Filter out PACKAGE when
it doesn't pass 'supported-package?'.
| Ludovic Courtès |
| 2021-12-08 | services: %desktop-services: Use SDDM rather than GDM on non-x86_64....This works around the fact that Rust is currently unavailable in Guix on
platforms other than x86_64-linux:
https://lists.gnu.org/archive/html/guix-devel/2021-11/msg00197.html
* gnu/services/desktop.scm (desktop-services-for-system): New
procedure.
(%desktop-services): Turn into a macro.
| Ludovic Courtès |
| 2021-12-08 | system: Mark 'services' field as thunked....This allows us to make services dependent on (%current-system), for
example.
* gnu/system.scm (<operating-system>)[services]: Mark as thunked.
| Ludovic Courtès |
| 2021-12-08 | gnu: idutils: Fix build with glibc 2.33....* gnu/packages/idutils.scm (idutils)[source]: Remove reference to 'gets'
from "lib/stdio.in.h".
| Ludovic Courtès |
| 2021-12-08 | gnu: fzf: Wrap with a compliant find(1)....* gnu/packages/terminals.scm (fzf)[inputs]: Add findutils.
[arguments]: Wrap the ‘fzf’ executable with its /bin directory in $PATH.
Addresses <https://issues.guix.gnu.org/52372>.
| Tobias Geerinckx-Rice |
| 2021-12-08 | gnu: libtorrent-rasterbar: Build with default cmake....* gnu/packages/bittorrent.scm (libtorrent-rasterbar)[arguments]: Remove
cmake flag.
| Efraim Flashner |
| 2021-12-08 | gnu: tadbit: Update to 1.0.1-1.5c4c1dd....* gnu/packages/bioinformatics.scm (tadbit): Update to 1.0.1-1.5c4c1dd.
[arguments]: Remove trailing #T from build phases; pass -fcommon to test
binaries; run tests conditionally.
| Ricardo Wurmus |
| 2021-12-08 | gnu: python2-sphinx: Remove websupport test....* gnu/packages/sphinx.scm (python2-sphinx)[arguments]: Remove websupport test
file.
| Ricardo Wurmus |
| 2021-12-08 | gnu: python2-sphinxcontrib-websupport: Downgrade to 1.1.2....* gnu/packages/sphinx.scm (python2-sphinxcontrib-websupport): Downgrade to
1.1.2.
[arguments]: Override; delete 'sanity-check phase.
[propagated-inputs]: Override and add python2-six.
(python-sphinxcontrib-websupport)[properties]: Record python2-variant.
| Ricardo Wurmus |
| 2021-12-08 | gnu: python2-jinja2: Downgrade to 2.11.3...* gnu/packages/python-xyz.scm (python2-jinja2): Downgrade to the last version
supporting Python 2.
(python-jinja2)[properties]: Record python2-variant.
| Ricardo Wurmus |
| 2021-12-08 | gnu: fastboot: Fix ‘--version’ output....* gnu/packages/android.scm (fastboot)[arguments]: Replace broken
‘git rev-parse’ shell command with the actual package VERSION.
Reported by kwjc on #guix.
| Tobias Geerinckx-Rice |
| 2021-12-08 | gnu: rtl8821ce-linux-module: Update to 0.0.0-4-ca204c6....Fixes compatibility with linux-libre@5.15:
[…]/source/core/rtw_br_ext.c:20:11: fatal error: net/ipx.h:
No such file or directory
#include <net/ipx.h>
^~~~~~~~~~~
compilation terminated.
* gnu/packages/linux.scm (rtl8821ce-linux-module):
Update to 0.0.0-4-ca204c6.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
| Zhu Zihao |
