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-rw-r--r--gnu/local.mk1
-rw-r--r--gnu/packages/graphics.scm6
-rw-r--r--gnu/packages/patches/cgal-security-pr-5371.patch1611
3 files changed, 2 insertions, 1616 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 3d4147a879..5c5555069e 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -887,7 +887,6 @@ dist_patch_DATA = \
%D%/packages/patches/cdparanoia-fpic.patch \
%D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch \
%D%/packages/patches/ceph-disable-cpu-optimizations.patch \
- %D%/packages/patches/cgal-security-pr-5371.patch \
%D%/packages/patches/chmlib-inttypes.patch \
%D%/packages/patches/cl-asdf-config-directories.patch \
%D%/packages/patches/clamav-config-llvm-libs.patch \
diff --git a/gnu/packages/graphics.scm b/gnu/packages/graphics.scm
index db04b93f20..4a301d387a 100644
--- a/gnu/packages/graphics.scm
+++ b/gnu/packages/graphics.scm
@@ -718,7 +718,7 @@ more.")
(define-public cgal
(package
(name "cgal")
- (version "5.2")
+ (version "5.2.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -726,9 +726,7 @@ more.")
"/CGAL-" version ".tar.xz"))
(sha256
(base32
- "08sr2k2dm4zasfbvisqpvs6djqw3rywzwpzr701an870nvnqck3l"))
- (patches (search-patches "cgal-security-pr-5371.patch"))
- (patch-flags '("-p2"))))
+ "1rhrpjsp4081nn2q215h78kc4msrj0081zg65k1gfp5hl88bg03y"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f)) ; no test target
diff --git a/gnu/packages/patches/cgal-security-pr-5371.patch b/gnu/packages/patches/cgal-security-pr-5371.patch
deleted file mode 100644
index dea53dceaf..0000000000
--- a/gnu/packages/patches/cgal-security-pr-5371.patch
+++ /dev/null
@@ -1,1611 +0,0 @@
-From 618b409b0fbcef7cb536a4134ae3a424ef5aae45 Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Mon, 18 Jan 2021 15:40:40 +0100
-Subject: [PATCH 1/8] Fix Nef_2 and Nef_S2 IO
-
----
- Nef_2/include/CGAL/Nef_2/PM_io_parser.h | 74 ++++++++++++---
- Nef_2/include/CGAL/Nef_polyhedron_2.h | 2 +
- Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h | 106 ++++++++++++++++------
- 3 files changed, 142 insertions(+), 40 deletions(-)
-
-diff --git a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-index 85295f3d85a..9b84dd37fbe 100644
---- a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-+++ b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-@@ -200,6 +200,11 @@ bool PM_io_parser<PMDEC>::read_vertex(Vertex_handle v)
- !(in >> p) ||
- !check_sep("}") ) return false;
-
-+ if(!(f >= 0 && ((iso && f < fn) || (!iso && f < en))))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- if (iso) v->set_face(Face_of[f]);
- else v->set_halfedge(Halfedge_of[f]);
- mark(v) = m; point(v) = p;
-@@ -229,10 +234,14 @@ bool PM_io_parser<PMDEC>::read_hedge(Halfedge_handle e)
- !(in >> f) || !check_sep(",") ||
- !(in >> m) || !check_sep("}") )
- return false;
-- CGAL_assertion_msg
-- (eo >= 0 || (std::size_t) eo < en || epr >= 0 || (std::size_t) epr < en || ene >= 0 || (std::size_t) ene < en ||
-- v >= 0 || (std::size_t) v < vn || f >= 0 || (std::size_t) f < fn ,
-- "wrong index in read_hedge");
-+
-+ if(!(eo >= 0 && (std::size_t) eo < en && epr >= 0 && (std::size_t) epr < en && ene >= 0 && (std::size_t) ene < en &&
-+ v >= 0 && (std::size_t) v < vn && f >= 0 && (std::size_t) f < fn ))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ std::cerr<<"wrong index in read_hedge"<<std::endl;
-+ return false;
-+ }
-
- // precond: objects exist!
- CGAL_assertion(EI[e->opposite()]);
-@@ -267,14 +276,32 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- int n, ei, vi; Mark m;
- if ( !(in >> n) || !check_sep("{") ) return false;
- if ( !(in >> ei) || !check_sep(",") ) return false;
-- if (ei >= 0) f->set_halfedge(Halfedge_of[ei]);
-+ if (ei >= 0 && ei < en)
-+ {
-+ f->set_halfedge(Halfedge_of[ei]);
-+ }
-+ else
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- while (in >> ei) {
- CGAL_assertion_msg(ei >= 0 && (std::size_t) ei < en, "wrong index in face cycle list.");
-+ if (!(ei >= 0 && ei < en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- f->store_fc(Halfedge_of[ei]);
- } in.clear();
- if (!check_sep(",")) { return false; }
- while (in >> vi) {
- CGAL_assertion_msg(vi >= 0 && (std::size_t) vi < vn, "wrong index in iso vertex list.");
-+ if (!(vi >= 0 && vi < vn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- f->store_iv(Vertex_of[vi]);
- } in.clear();
- if (!check_sep(",") || !(in >> m) || !check_sep("}") )
-@@ -313,13 +340,26 @@ template <typename PMDEC>
- void PM_io_parser<PMDEC>::read()
- {
- if ( !check_sep("Plane_map_2") )
-- CGAL_error_msg("PM_io_parser::read: no embedded_PM header.");
-+ {
-+ std::cerr<<"PM_io_parser::read: no embedded_PM header."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("vertices") && (in >> vn)) )
-- CGAL_error_msg("PM_io_parser::read: wrong node line.");
-+ {
-+ std::cerr<<"PM_io_parser::read: wrong node line."<<std::endl;
-+ return;
-+ }
-+
- if ( !(check_sep("halfedges") && (in >> en) && (en%2==0)) )
-- CGAL_error_msg("PM_io_parser::read: wrong edge line.");
-+ {
-+ std::cerr<<"PM_io_parser::read: wrong edge line."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("faces") && (in >> fn)) )
-- CGAL_error_msg("PM_io_parser::read: wrong face line.");
-+ {
-+ std::cerr<<"PM_io_parser::read: wrong face line."<<std::endl;
-+ return;
-+ }
-
- Vertex_of.resize(vn);
- Halfedge_of.resize(en);
-@@ -333,16 +373,24 @@ void PM_io_parser<PMDEC>::read()
-
- for(i=0; i<vn; i++) {
- if (!read_vertex(Vertex_of[i]))
-- CGAL_error_msg("PM_io_parser::read: error in node line");
-+ {
-+ std::cerr<<"PM_io_parser::read: error in node line"<<std::endl;
-+ return;
-+ }
- }
- for(i=0; i<en; i++) {
- if (!read_hedge(Halfedge_of[i]))
-- CGAL_error_msg("PM_io_parser::read: error in halfedge\
-- line");
-+ {
-+ std::cerr<<"PM_io_parser::read: error in halfedge line"<<std::endl;
-+ return;
-+ }
- }
- for(i=0; i<fn; i++) {
- if (!read_face(Face_of[i]))
-- CGAL_error_msg("PM_io_parser::read: error in face line");
-+ {
-+ std::cerr<<"PM_io_parser::read: error in face line"<<std::endl;
-+ return;
-+ }
- }
- }
-
-diff --git a/Nef_2/include/CGAL/Nef_polyhedron_2.h b/Nef_2/include/CGAL/Nef_polyhedron_2.h
-index 92c54593386..62aad3e5649 100644
---- a/Nef_2/include/CGAL/Nef_polyhedron_2.h
-+++ b/Nef_2/include/CGAL/Nef_polyhedron_2.h
-@@ -1112,6 +1112,8 @@ std::istream& operator>>
- std::cerr << "Nef_polyhedron_2 input corrupted." << std::endl;
- NP = Nef_polyhedron_2<T,Items,Mark>();
- }
-+ if(!is)
-+ return is;
- typename Nef_polyhedron_2<T,Items,Mark>::Topological_explorer D(NP.explorer());
- D.check_integrity_and_topological_planarity();
- return is;
-diff --git a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-index 7bddd3036d5..631c63dc5dc 100644
---- a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-+++ b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-@@ -203,8 +203,14 @@ bool SM_io_parser<Decorator_>::read_vertex(SVertex_handle v)
- !(in >> p) ||
- !check_sep("}") ) return false;
-
-- if (iso) set_face(v,SFace_of[f]);
-- else set_first_out_edge(v,Edge_of[f]);
-+ if(f<0 || (iso && f > fn) || (!iso && f > en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
-+
-+ if (iso) this->set_face(v,SFace_of[f]);
-+ else this->set_first_out_edge(v,Edge_of[f]);
- v->mark() = m; v->point() = p;
- return true;
- }
-@@ -235,17 +241,21 @@ bool SM_io_parser<Decorator_>::read_edge(SHalfedge_handle e)
- !(in >> m) || !check_sep(",") ||
- !(in >> k) || !check_sep("}") )
- return false;
-- CGAL_assertion_msg
-+ if (!
- (eo >= 0 && eo < en && epr >= 0 && epr < en && ene >= 0 && ene < en &&
-- v >= 0 && v < vn && f >= 0 && f < fn ,
-- "wrong index in read_edge");
-+ v >= 0 && v < vn && f >= 0 && f < fn ))
-+ {
-+ std::cerr<<"wrong index in read_edge"<<std::endl;
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
-
- // precond: features exist!
- CGAL_assertion(EI[e->twin()]);
-- set_prev(e,Edge_of[epr]);
-- set_next(e,Edge_of[ene]);
-- set_source(e,SVertex_of[v]);
-- set_face(e,SFace_of[f]);
-+ this->set_prev(e,Edge_of[epr]);
-+ this->set_next(e,Edge_of[ene]);
-+ this->set_source(e,SVertex_of[v]);
-+ this->set_face(e,SFace_of[f]);
- e->mark() = m;
- e->circle() = k;
- return true;
-@@ -274,7 +284,7 @@ bool SM_io_parser<Decorator_>::read_loop(SHalfloop_handle l)
- CGAL_assertion_msg(
- (lo >= 0 && lo < 2 && f >= 0 && f < fn),"wrong index in read_edge");
-
-- set_face(l,SFace_of[f]);
-+ this->set_face(l,SFace_of[f]);
- l->mark() = m;
- l->circle() = k;
- return true;
-@@ -303,21 +313,33 @@ bool SM_io_parser<Decorator_>::read_face(SFace_handle f)
- int n, ei, vi, li; Mark m;
- if ( !(in >> n) || !check_sep("{") ) return false;
- while (in >> ei) {
-- CGAL_assertion_msg(ei >= 0 && ei < en,
-- "wrong index in face cycle list.");
-- store_sm_boundary_object(Edge_of[ei],f);
-+ if(!(ei >= 0 && ei < en))
-+ {
-+ std::cerr<<"wrong index in face cycle list."<<std::endl;
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
-+ this->store_sm_boundary_object(Edge_of[ei],f);
- } in.clear();
- if (!check_sep(",")) { return false; }
- while (in >> vi) {
-- CGAL_assertion_msg(vi >= 0 && vi < vn,
-- "wrong index in iso vertex list.");
-- store_sm_boundary_object(SVertex_of[vi],f);
-+ if(!(vi >= 0 && vi < vn))
-+ {
-+ std::cerr<<"wrong index in iso vertex list."<<std::endl;
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
-+ this->store_sm_boundary_object(SVertex_of[vi],f);
- } in.clear();
- if (!check_sep(",")) { return false; }
- while (in >> li) {
-- CGAL_assertion_msg(li >= 0 && li < 2,
-- "wrong index in iso vertex list.");
-- store_sm_boundary_object(Loop_of[li],f);
-+ if(!(li >= 0 && li < 2))
-+ {
-+ std::cerr<<"wrong index in iso vertex list."<<std::endl;
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
-+ this->store_sm_boundary_object(Loop_of[li],f);
- } in.clear();
- if (!check_sep(",") || !(in >> m) || !check_sep("}") )
- return false;
-@@ -357,16 +379,36 @@ void SM_io_parser<Decorator_>::print() const
- template <typename Decorator_>
- void SM_io_parser<Decorator_>::read()
- {
-+ if ( !check_sep("Nef_polyhedron_S2") )
-+ {
-+ std::cerr<<"Missing line in header"<<std::endl;
-+ return;
-+ }
- if ( !check_sep("Sphere_map_2") )
-- CGAL_error_msg("SM_io_parser::read: no embedded_PM header.");
-+ {
-+ std::cerr<<"SM_io_parser::read: no embedded_PM header."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("vertices") && (in >> vn)) )
-- CGAL_error_msg("SM_io_parser::read: wrong vertex line.");
-+ {
-+ std::cerr<<"SM_io_parser::read: wrong vertex line."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("edges") && (in >> en) && (en%2==0)) )
-- CGAL_error_msg("SM_io_parser::read: wrong edge line.");
-+ {
-+ std::cerr<<"SM_io_parser::read: wrong edge line."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("loops") && (in >> ln)) )
-- CGAL_error_msg("SM_io_parser::read: wrong loop line.");
-+ {
-+ std::cerr<<"SM_io_parser::read: wrong loop line."<<std::endl;
-+ return;
-+ }
- if ( !(check_sep("faces") && (in >> fn)) )
-- CGAL_error_msg("SM_io_parser::read: wrong face line.");
-+ {
-+ std::cerr<<"SM_io_parser::read: wrong face line."<<std::endl;
-+ return;
-+ }
-
- SVertex_of.resize(vn);
- Edge_of.resize(en);
-@@ -383,18 +425,28 @@ void SM_io_parser<Decorator_>::read()
-
- for(i=0; i<vn; i++) {
- if (!read_vertex(SVertex_of[i]))
-- CGAL_error_msg("SM_io_parser::read: error in node line");
-+ {
-+ std::cerr<<"SM_io_parser::read: error in node line"<<std::endl;
-+ return;
-+ }
- }
- for(i=0; i<en; i++) {
- if (!read_edge(Edge_of[i]))
-- CGAL_error_msg("SM_io_parser::read: error in edge line");
-+ {
-+ std::cerr<<"SM_io_parser::read: error in edge line"<<std::endl;
-+ return;
-+ }
-+
- }
- if ( ln == 2 ) {
- read_loop(Loop_of[0]); read_loop(Loop_of[1]);
- }
- for(i=0; i<fn; i++) {
- if (!read_face(SFace_of[i]))
-- CGAL_error_msg("SM_io_parser::read: error in face line");
-+ {
-+ std::cerr<<"SM_io_parser::read: error in face line"<<std::endl;
-+ return;
-+ }
- }
- }
-
-
-From 5a1ab45058112f8647c14c02f58905ecc597ec76 Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Tue, 19 Jan 2021 12:24:08 +0100
-Subject: [PATCH 2/8] Fix Nef_3
-
----
- Nef_3/include/CGAL/Nef_3/SNC_io_parser.h | 195 ++++++++++++++++++++++-
- 1 file changed, 188 insertions(+), 7 deletions(-)
-
-diff --git a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-index 5eee7528ee7..04d9d0ac8e8 100644
---- a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-+++ b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-@@ -1444,40 +1444,61 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- typename std::vector<Vertex_iterator>::iterator vi;
- for(vi=Vertex_of.begin(); vi!=Vertex_of.end(); ++vi) {
- if (!read_vertex<K>(*vi))
-- CGAL_error_msg("SNC_io_parser::read: error in node line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in node line"<<std::endl;
-+ return;
-+ }
- }
-
- typename std::vector<Halfedge_iterator>::iterator ei;
- for(ei=Edge_of.begin(); ei!=Edge_of.end(); ++ei) {
- if (!read_edge<K>(*ei))
-- CGAL_error_msg("SNC_io_parser::read: error in edge line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in edge line"<<std::endl;
-+ return;
-+ }
- }
-
- typedef typename std::vector<Halffacet_iterator>::iterator vhf_iterator;
- vhf_iterator fi;
- for(fi=Halffacet_of.begin(); fi!=Halffacet_of.end(); ++fi) {
- if (!read_facet<K>(*fi))
-- CGAL_error_msg("SNC_io_parser::read: error in facet line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in facet line"<<std::endl;
-+ return;
-+ }
- }
- typename std::vector<Volume_iterator>::iterator ci;
- for(ci=Volume_of.begin()+plus01; ci!=Volume_of.end(); ++ci) {
- if (!read_volume(*ci))
-- CGAL_error_msg("SNC_io_parser::read: error in volume line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in volume line"<<std::endl;
-+ return;
-+ }
- }
- typename std::vector<SHalfedge_iterator>::iterator sei;
- for(sei=SEdge_of.begin(); sei!=SEdge_of.end(); ++sei) {
- if (!read_sedge<K>(*sei))
-- CGAL_error_msg("SNC_io_parser::read: error in sedge line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in sedge line"<<std::endl;
-+ return;
-+ }
- }
- typename std::vector<SHalfloop_iterator>::iterator sli;
- for(sli=SLoop_of.begin(); sli!=SLoop_of.end(); ++sli) {
- if (!read_sloop<K>(*sli))
-- CGAL_error_msg("SNC_io_parser::read: error in sloop line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in sloop line"<<std::endl;
-+ return;
-+ }
- }
- typename std::vector<SFace_iterator>::iterator sfi;
- for(sfi=SFace_of.begin(); sfi!=SFace_of.end(); ++sfi) {
- if (!read_sface(*sfi))
-- CGAL_error_msg("SNC_io_parser::read: error in sface line");
-+ {
-+ std::cerr<<"SNC_io_parser::read: error in sface line"<<std::endl;
-+ return;
-+ }
- }
-
- SNC_constructor C(*this->sncp());
-@@ -1535,21 +1556,56 @@ read_vertex(Vertex_handle vh) {
- vh->sncp() = this->sncp();
-
- in >> index;
-+ if(index >= int(en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->svertices_begin() = (index >= 0 ? Edge_of[index] : this->svertices_end());
- in >> index;
-+ if(index >= int(en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->svertices_last() = index >= 0 ? Edge_of[index] : this->svertices_end();
- OK = OK && test_string(",");
- in >> index;
-+ if(index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->shalfedges_begin() = index >= 0 ? SEdge_of[index] : this->shalfedges_end();
- in >> index;
-+ if(index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->shalfedges_last() = index >= 0 ? SEdge_of[index] : this->shalfedges_end();
- OK = OK && test_string(",");
- in >> index;
-+ if(index >= int(sfn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->sfaces_begin() = index >= 0 ? SFace_of[index] : this->sfaces_end();
- in >> index;
-+ if(index >= int(sfn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->sfaces_last() = index >= 0 ? SFace_of[index] : this->sfaces_end();
- OK = OK && test_string(",");
- in >> index;
-+ if(index >= int(sln))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- vh->shalfloop() = index >= 0 ? SLoop_of[index] : this->shalfloops_end();
- OK = OK && test_string("|");
- #ifdef CGAL_NEF_NATURAL_COORDINATE_INPUT
-@@ -1604,17 +1660,37 @@ read_edge(Halfedge_handle eh) {
- OK = OK && test_string("{");
-
- in >> index;
-+ if(index < 0 || index >= int(en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- eh->twin() = Edge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(vn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- eh->center_vertex() = Vertex_of[index];
- OK = OK && test_string(",");
- in >> index;
- if(index == 0) {
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- eh->out_sedge() = SEdge_of[index];
- } else {
- in >> index;
-+ if(index < 0 || index >= int(sfn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- eh->incident_sface() = SFace_of[index];
- }
- OK = OK && test_string("|");
-@@ -1669,6 +1745,11 @@ read_facet(Halffacet_handle fh) {
- OK = OK && test_string("{");
-
- in >> index;
-+ if(index < 0 || index >= int(fn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- fh->twin() = Halffacet_of[index];
- OK = OK && test_string(",");
-
-@@ -1676,6 +1757,11 @@ read_facet(Halffacet_handle fh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- fh->boundary_entry_objects().push_back(make_object(SEdge_of[index]));
- in >> cc;
- }
-@@ -1684,11 +1770,21 @@ read_facet(Halffacet_handle fh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-+ if(index < 0 || index >= int(sln))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- fh->boundary_entry_objects().push_back(make_object(SLoop_of[index]));
- in >> cc;
- }
-
- in >> index;
-+ if(index < 0 || index >= int(vn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- fh->incident_volume() = Volume_of[index+addInfiBox];
- OK = OK && test_string("|");
- #ifdef CGAL_NEF_NATURAL_COORDINATE_INPUT
-@@ -1731,6 +1827,11 @@ read_volume(Volume_handle ch) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-+ if(index < 0 || index >= int(sfn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- ch->shell_entry_objects().push_back(make_object(SFace_of[index]));
- in >> cc;
- }
-@@ -1781,27 +1882,67 @@ read_sedge(SHalfedge_handle seh) {
- OK = OK && test_string("{");
-
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->twin() = SEdge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->sprev() = SEdge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->snext() = SEdge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(en))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->source() = Edge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(sfn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->incident_sface() = SFace_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->prev() = SEdge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(sen))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->next() = SEdge_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= int(fn))
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- seh->facet() = Halffacet_of[index];
- OK = OK && test_string("|");
- #ifdef CGAL_NEF_NATURAL_COORDINATE_INPUT
-@@ -1852,12 +1993,27 @@ read_sloop(SHalfloop_handle slh) {
- OK = OK && test_string("{");
-
- in >> index;
-+ if(index < 0 || index >= sln)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- slh->twin() = SLoop_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= sfn)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- slh->incident_sface() = SFace_of[index];
- OK = OK && test_string(",");
- in >> index;
-+ if(index < 0 || index >= fn)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- slh->facet() = Halffacet_of[index];
- OK = OK && test_string("|");
- #ifdef CGAL_NEF_NATURAL_COORDINATE_INPUT
-@@ -1904,6 +2060,11 @@ read_sface(SFace_handle sfh) {
- OK = OK && test_string("{");
-
- in >> index;
-+ if(index < 0 || index >= vn)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- sfh->center_vertex() = Vertex_of[index];
- OK = OK && test_string(",");
-
-@@ -1913,6 +2074,11 @@ read_sface(SFace_handle sfh) {
- in >> index;
- // sfh->boundary_entry_objects().push_back(SEdge_of[index]);
- SM_decorator SD(&*sfh->center_vertex());
-+ if(index < 0 || index >= sen)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- SD.link_as_face_cycle(SEdge_of[index],sfh);
- in >> cc;
- }
-@@ -1921,6 +2087,11 @@ read_sface(SFace_handle sfh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-+ if(index < 0 || index >= en)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- sfh->boundary_entry_objects().push_back(make_object(Edge_of[index]));
- this->sncp()->store_sm_boundary_item(Edge_of[index], --(sfh->sface_cycles_end()));
- in >> cc;
-@@ -1930,12 +2101,22 @@ read_sface(SFace_handle sfh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-+ if(index < 0 || index >= sln)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- sfh->boundary_entry_objects().push_back(make_object(SLoop_of[index]));
- this->sncp()->store_sm_boundary_item(SLoop_of[index], --(sfh->sface_cycles_end()));
- in >> cc;
- }
-
- in >> index;
-+ if(index < 0 || index >= vn)
-+ {
-+ in.clear(std::ios_base::badbit);
-+ return false;
-+ }
- sfh->volume() = Volume_of[index+addInfiBox];
- OK = OK && test_string("}");
- in >> sfh->mark();
-
-From 9e291e6bbfe23137fb2dd3a0f8d6461229ca2376 Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Tue, 19 Jan 2021 14:04:54 +0100
-Subject: [PATCH 3/8] replace cerr by CGAL_warning_msg
-
----
- Nef_2/include/CGAL/Nef_2/PM_io_parser.h | 14 +++---
- Nef_3/include/CGAL/Nef_3/SNC_io_parser.h | 53 ++++++++++++++++-------
- Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h | 18 ++++----
- 3 files changed, 54 insertions(+), 31 deletions(-)
-
-diff --git a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-index 9b84dd37fbe..52bc830e115 100644
---- a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-+++ b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-@@ -341,23 +341,23 @@ void PM_io_parser<PMDEC>::read()
- {
- if ( !check_sep("Plane_map_2") )
- {
-- std::cerr<<"PM_io_parser::read: no embedded_PM header."<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: no embedded_PM header.");
- return;
- }
- if ( !(check_sep("vertices") && (in >> vn)) )
- {
-- std::cerr<<"PM_io_parser::read: wrong node line."<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: wrong node line.");
- return;
- }
-
- if ( !(check_sep("halfedges") && (in >> en) && (en%2==0)) )
- {
-- std::cerr<<"PM_io_parser::read: wrong edge line."<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: wrong edge line.");
- return;
- }
- if ( !(check_sep("faces") && (in >> fn)) )
- {
-- std::cerr<<"PM_io_parser::read: wrong face line."<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: wrong face line.");
- return;
- }
-
-@@ -374,21 +374,21 @@ void PM_io_parser<PMDEC>::read()
- for(i=0; i<vn; i++) {
- if (!read_vertex(Vertex_of[i]))
- {
-- std::cerr<<"PM_io_parser::read: error in node line"<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: error in node line");
- return;
- }
- }
- for(i=0; i<en; i++) {
- if (!read_hedge(Halfedge_of[i]))
- {
-- std::cerr<<"PM_io_parser::read: error in halfedge line"<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: error in halfedge line");
- return;
- }
- }
- for(i=0; i<fn; i++) {
- if (!read_face(Face_of[i]))
- {
-- std::cerr<<"PM_io_parser::read: error in face line"<<std::endl;
-+ CGAL_warning_msg(false, "PM_io_parser::read: error in face line");
- return;
- }
- }
-diff --git a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-index 04d9d0ac8e8..21c54dd4133 100644
---- a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-+++ b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-@@ -1400,24 +1400,47 @@ template <typename EW>
- void SNC_io_parser<EW>::read()
- {
- if ( !check_sep("Selective Nef Complex") )
-- CGAL_error_msg("SNC_io_parser::read: no SNC header.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: no SNC header.");
-+ returnl
-+ }
- std::string kernel_type;
- in >> kernel_type;
- CGAL_assertion(kernel_type == "standard" || kernel_type == "extended");
- if ( !(check_sep("vertices") && (in >> vn)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong vertex line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong vertex line.");
-+ return;
-+ }
- if ( !(check_sep("halfedges") && (in >> en) && (en%2==0)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong edge line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong edge line.");
-+ return;
-+ }
- if ( !(check_sep("facets") && (in >> fn) && (fn%2==0)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong facet line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong facet line.");
-+ }
- if ( !(check_sep("volumes") && (in >> cn)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong volume line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong volume line.");
-+ return;
-+ }
- if ( !(check_sep("shalfedges") && (in >> sen)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong sedge line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong sedge line.");
-+ return;
-+ }
- if ( !(check_sep("shalfloops") && (in >> sln)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong sloop line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong sloop line.");
-+ return;
-+ }
- if ( !(check_sep("sfaces") && (in >> sfn)) )
-- CGAL_error_msg("SNC_io_parser::read: wrong sface line.");
-+ {
-+ CGAL_warning_msg(false, "SNC_io_parser::read: wrong sface line.");
-+ return;
-+ }
-
- addInfiBox = (kernel_type == "standard" && Infi_box::extended_kernel());
-
-@@ -1445,7 +1468,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(vi=Vertex_of.begin(); vi!=Vertex_of.end(); ++vi) {
- if (!read_vertex<K>(*vi))
- {
-- std::cerr<<"SNC_io_parser::read: error in node line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in node line");
- return;
- }
- }
-@@ -1454,7 +1477,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(ei=Edge_of.begin(); ei!=Edge_of.end(); ++ei) {
- if (!read_edge<K>(*ei))
- {
-- std::cerr<<"SNC_io_parser::read: error in edge line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in edge line");
- return;
- }
- }
-@@ -1464,7 +1487,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(fi=Halffacet_of.begin(); fi!=Halffacet_of.end(); ++fi) {
- if (!read_facet<K>(*fi))
- {
-- std::cerr<<"SNC_io_parser::read: error in facet line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in facet line");
- return;
- }
- }
-@@ -1472,7 +1495,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(ci=Volume_of.begin()+plus01; ci!=Volume_of.end(); ++ci) {
- if (!read_volume(*ci))
- {
-- std::cerr<<"SNC_io_parser::read: error in volume line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in volume line");
- return;
- }
- }
-@@ -1480,7 +1503,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(sei=SEdge_of.begin(); sei!=SEdge_of.end(); ++sei) {
- if (!read_sedge<K>(*sei))
- {
-- std::cerr<<"SNC_io_parser::read: error in sedge line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in sedge line");
- return;
- }
- }
-@@ -1488,7 +1511,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(sli=SLoop_of.begin(); sli!=SLoop_of.end(); ++sli) {
- if (!read_sloop<K>(*sli))
- {
-- std::cerr<<"SNC_io_parser::read: error in sloop line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in sloop line");
- return;
- }
- }
-@@ -1496,7 +1519,7 @@ void SNC_io_parser<EW>::read_items(int plus01) {
- for(sfi=SFace_of.begin(); sfi!=SFace_of.end(); ++sfi) {
- if (!read_sface(*sfi))
- {
-- std::cerr<<"SNC_io_parser::read: error in sface line"<<std::endl;
-+ CGAL_warning_msg(false, "SNC_io_parser::read: error in sface line");
- return;
- }
- }
-diff --git a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-index 631c63dc5dc..a9377719f93 100644
---- a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-+++ b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-@@ -381,32 +381,32 @@ void SM_io_parser<Decorator_>::read()
- {
- if ( !check_sep("Nef_polyhedron_S2") )
- {
-- std::cerr<<"Missing line in header"<<std::endl;
-+ CGAL_warning_msg(false, "Missing line in header");
- return;
- }
- if ( !check_sep("Sphere_map_2") )
- {
-- std::cerr<<"SM_io_parser::read: no embedded_PM header."<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: no embedded_PM header.");
- return;
- }
- if ( !(check_sep("vertices") && (in >> vn)) )
- {
-- std::cerr<<"SM_io_parser::read: wrong vertex line."<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: wrong vertex line.");
- return;
- }
- if ( !(check_sep("edges") && (in >> en) && (en%2==0)) )
- {
-- std::cerr<<"SM_io_parser::read: wrong edge line."<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: wrong edge line.");
- return;
- }
- if ( !(check_sep("loops") && (in >> ln)) )
- {
-- std::cerr<<"SM_io_parser::read: wrong loop line."<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: wrong loop line.");
- return;
- }
- if ( !(check_sep("faces") && (in >> fn)) )
- {
-- std::cerr<<"SM_io_parser::read: wrong face line."<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: wrong face line.");
- return;
- }
-
-@@ -426,14 +426,14 @@ void SM_io_parser<Decorator_>::read()
- for(i=0; i<vn; i++) {
- if (!read_vertex(SVertex_of[i]))
- {
-- std::cerr<<"SM_io_parser::read: error in node line"<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: error in node line");
- return;
- }
- }
- for(i=0; i<en; i++) {
- if (!read_edge(Edge_of[i]))
- {
-- std::cerr<<"SM_io_parser::read: error in edge line"<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: error in edge line");
- return;
- }
-
-@@ -444,7 +444,7 @@ void SM_io_parser<Decorator_>::read()
- for(i=0; i<fn; i++) {
- if (!read_face(SFace_of[i]))
- {
-- std::cerr<<"SM_io_parser::read: error in face line"<<std::endl;
-+ CGAL_warning_msg(false, "SM_io_parser::read: error in face line");
- return;
- }
- }
-
-From 2e592e0027b2d85680273425161581655f4677fd Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Wed, 20 Jan 2021 08:38:33 +0100
-Subject: [PATCH 4/8] Fix typo and use setstate
-
----
- Nef_2/include/CGAL/Nef_2/PM_io_parser.h | 10 ++--
- Nef_3/include/CGAL/Nef_3/SNC_io_parser.h | 66 +++++++++++------------
- Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h | 10 ++--
- 3 files changed, 43 insertions(+), 43 deletions(-)
-
-diff --git a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-index 52bc830e115..64a3e94916e 100644
---- a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-+++ b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-@@ -202,7 +202,7 @@ bool PM_io_parser<PMDEC>::read_vertex(Vertex_handle v)
-
- if(!(f >= 0 && ((iso && f < fn) || (!iso && f < en))))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- if (iso) v->set_face(Face_of[f]);
-@@ -238,7 +238,7 @@ bool PM_io_parser<PMDEC>::read_hedge(Halfedge_handle e)
- if(!(eo >= 0 && (std::size_t) eo < en && epr >= 0 && (std::size_t) epr < en && ene >= 0 && (std::size_t) ene < en &&
- v >= 0 && (std::size_t) v < vn && f >= 0 && (std::size_t) f < fn ))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- std::cerr<<"wrong index in read_hedge"<<std::endl;
- return false;
- }
-@@ -282,14 +282,14 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- }
- else
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- while (in >> ei) {
- CGAL_assertion_msg(ei >= 0 && (std::size_t) ei < en, "wrong index in face cycle list.");
- if (!(ei >= 0 && ei < en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- f->store_fc(Halfedge_of[ei]);
-@@ -299,7 +299,7 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- CGAL_assertion_msg(vi >= 0 && (std::size_t) vi < vn, "wrong index in iso vertex list.");
- if (!(vi >= 0 && vi < vn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- f->store_iv(Vertex_of[vi]);
-diff --git a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-index 21c54dd4133..e5530445153 100644
---- a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-+++ b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-@@ -1402,7 +1402,7 @@ void SNC_io_parser<EW>::read()
- if ( !check_sep("Selective Nef Complex") )
- {
- CGAL_warning_msg(false, "SNC_io_parser::read: no SNC header.");
-- returnl
-+ return;
- }
- std::string kernel_type;
- in >> kernel_type;
-@@ -1581,14 +1581,14 @@ read_vertex(Vertex_handle vh) {
- in >> index;
- if(index >= int(en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->svertices_begin() = (index >= 0 ? Edge_of[index] : this->svertices_end());
- in >> index;
- if(index >= int(en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->svertices_last() = index >= 0 ? Edge_of[index] : this->svertices_end();
-@@ -1596,14 +1596,14 @@ read_vertex(Vertex_handle vh) {
- in >> index;
- if(index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->shalfedges_begin() = index >= 0 ? SEdge_of[index] : this->shalfedges_end();
- in >> index;
- if(index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->shalfedges_last() = index >= 0 ? SEdge_of[index] : this->shalfedges_end();
-@@ -1611,14 +1611,14 @@ read_vertex(Vertex_handle vh) {
- in >> index;
- if(index >= int(sfn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->sfaces_begin() = index >= 0 ? SFace_of[index] : this->sfaces_end();
- in >> index;
- if(index >= int(sfn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->sfaces_last() = index >= 0 ? SFace_of[index] : this->sfaces_end();
-@@ -1626,7 +1626,7 @@ read_vertex(Vertex_handle vh) {
- in >> index;
- if(index >= int(sln))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- vh->shalfloop() = index >= 0 ? SLoop_of[index] : this->shalfloops_end();
-@@ -1685,7 +1685,7 @@ read_edge(Halfedge_handle eh) {
- in >> index;
- if(index < 0 || index >= int(en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- eh->twin() = Edge_of[index];
-@@ -1693,7 +1693,7 @@ read_edge(Halfedge_handle eh) {
- in >> index;
- if(index < 0 || index >= int(vn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- eh->center_vertex() = Vertex_of[index];
-@@ -1703,7 +1703,7 @@ read_edge(Halfedge_handle eh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- eh->out_sedge() = SEdge_of[index];
-@@ -1711,7 +1711,7 @@ read_edge(Halfedge_handle eh) {
- in >> index;
- if(index < 0 || index >= int(sfn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- eh->incident_sface() = SFace_of[index];
-@@ -1770,7 +1770,7 @@ read_facet(Halffacet_handle fh) {
- in >> index;
- if(index < 0 || index >= int(fn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- fh->twin() = Halffacet_of[index];
-@@ -1782,7 +1782,7 @@ read_facet(Halffacet_handle fh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- fh->boundary_entry_objects().push_back(make_object(SEdge_of[index]));
-@@ -1795,7 +1795,7 @@ read_facet(Halffacet_handle fh) {
- in >> index;
- if(index < 0 || index >= int(sln))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- fh->boundary_entry_objects().push_back(make_object(SLoop_of[index]));
-@@ -1805,7 +1805,7 @@ read_facet(Halffacet_handle fh) {
- in >> index;
- if(index < 0 || index >= int(vn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- fh->incident_volume() = Volume_of[index+addInfiBox];
-@@ -1852,7 +1852,7 @@ read_volume(Volume_handle ch) {
- in >> index;
- if(index < 0 || index >= int(sfn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- ch->shell_entry_objects().push_back(make_object(SFace_of[index]));
-@@ -1907,7 +1907,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->twin() = SEdge_of[index];
-@@ -1915,7 +1915,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->sprev() = SEdge_of[index];
-@@ -1923,7 +1923,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->snext() = SEdge_of[index];
-@@ -1931,7 +1931,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->source() = Edge_of[index];
-@@ -1939,7 +1939,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sfn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->incident_sface() = SFace_of[index];
-@@ -1947,7 +1947,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->prev() = SEdge_of[index];
-@@ -1955,7 +1955,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(sen))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->next() = SEdge_of[index];
-@@ -1963,7 +1963,7 @@ read_sedge(SHalfedge_handle seh) {
- in >> index;
- if(index < 0 || index >= int(fn))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- seh->facet() = Halffacet_of[index];
-@@ -2018,7 +2018,7 @@ read_sloop(SHalfloop_handle slh) {
- in >> index;
- if(index < 0 || index >= sln)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- slh->twin() = SLoop_of[index];
-@@ -2026,7 +2026,7 @@ read_sloop(SHalfloop_handle slh) {
- in >> index;
- if(index < 0 || index >= sfn)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- slh->incident_sface() = SFace_of[index];
-@@ -2034,7 +2034,7 @@ read_sloop(SHalfloop_handle slh) {
- in >> index;
- if(index < 0 || index >= fn)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- slh->facet() = Halffacet_of[index];
-@@ -2085,7 +2085,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- if(index < 0 || index >= vn)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- sfh->center_vertex() = Vertex_of[index];
-@@ -2099,7 +2099,7 @@ read_sface(SFace_handle sfh) {
- SM_decorator SD(&*sfh->center_vertex());
- if(index < 0 || index >= sen)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- SD.link_as_face_cycle(SEdge_of[index],sfh);
-@@ -2112,7 +2112,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- if(index < 0 || index >= en)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- sfh->boundary_entry_objects().push_back(make_object(Edge_of[index]));
-@@ -2126,7 +2126,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- if(index < 0 || index >= sln)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- sfh->boundary_entry_objects().push_back(make_object(SLoop_of[index]));
-@@ -2137,7 +2137,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- if(index < 0 || index >= vn)
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- sfh->volume() = Volume_of[index+addInfiBox];
-diff --git a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-index a9377719f93..d58126bac9c 100644
---- a/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-+++ b/Nef_S2/include/CGAL/Nef_S2/SM_io_parser.h
-@@ -205,7 +205,7 @@ bool SM_io_parser<Decorator_>::read_vertex(SVertex_handle v)
-
- if(f<0 || (iso && f > fn) || (!iso && f > en))
- {
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
-
-@@ -246,7 +246,7 @@ bool SM_io_parser<Decorator_>::read_edge(SHalfedge_handle e)
- v >= 0 && v < vn && f >= 0 && f < fn ))
- {
- std::cerr<<"wrong index in read_edge"<<std::endl;
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
-
-@@ -316,7 +316,7 @@ bool SM_io_parser<Decorator_>::read_face(SFace_handle f)
- if(!(ei >= 0 && ei < en))
- {
- std::cerr<<"wrong index in face cycle list."<<std::endl;
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- this->store_sm_boundary_object(Edge_of[ei],f);
-@@ -326,7 +326,7 @@ bool SM_io_parser<Decorator_>::read_face(SFace_handle f)
- if(!(vi >= 0 && vi < vn))
- {
- std::cerr<<"wrong index in iso vertex list."<<std::endl;
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- this->store_sm_boundary_object(SVertex_of[vi],f);
-@@ -336,7 +336,7 @@ bool SM_io_parser<Decorator_>::read_face(SFace_handle f)
- if(!(li >= 0 && li < 2))
- {
- std::cerr<<"wrong index in iso vertex list."<<std::endl;
-- in.clear(std::ios_base::badbit);
-+ in.setstate(std::ios_base::badbit);
- return false;
- }
- this->store_sm_boundary_object(Loop_of[li],f);
-
-From ffa019712b0ad3b20e3d02edad4d731fda04a2ef Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Mon, 25 Jan 2021 12:59:48 +0100
-Subject: [PATCH 5/8] First face may be -1, don't fail on it, just don't use it
-
----
- Nef_2/include/CGAL/Nef_2/PM_io_parser.h | 6 +-----
- 1 file changed, 1 insertion(+), 5 deletions(-)
-
-diff --git a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-index 64a3e94916e..d08b08180d6 100644
---- a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-+++ b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-@@ -280,11 +280,7 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- {
- f->set_halfedge(Halfedge_of[ei]);
- }
-- else
-- {
-- in.setstate(std::ios_base::badbit);
-- return false;
-- }
-+
- while (in >> ei) {
- CGAL_assertion_msg(ei >= 0 && (std::size_t) ei < en, "wrong index in face cycle list.");
- if (!(ei >= 0 && ei < en))
-
-From d78842712cdfcbb3bdfc5f7cb252d3772fd6a16f Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Tue, 26 Jan 2021 09:55:20 +0100
-Subject: [PATCH 6/8] Fix conversion warnigns
-
----
- Nef_2/include/CGAL/Nef_2/PM_io_parser.h | 8 ++++----
- Nef_3/include/CGAL/Nef_3/SNC_io_parser.h | 18 +++++++++---------
- 2 files changed, 13 insertions(+), 13 deletions(-)
-
-diff --git a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-index d08b08180d6..39b99b37d7c 100644
---- a/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-+++ b/Nef_2/include/CGAL/Nef_2/PM_io_parser.h
-@@ -200,7 +200,7 @@ bool PM_io_parser<PMDEC>::read_vertex(Vertex_handle v)
- !(in >> p) ||
- !check_sep("}") ) return false;
-
-- if(!(f >= 0 && ((iso && f < fn) || (!iso && f < en))))
-+ if(!(f >= 0 && ((iso && (std::size_t)f < fn) || (!iso && (std::size_t)f < en))))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -276,14 +276,14 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- int n, ei, vi; Mark m;
- if ( !(in >> n) || !check_sep("{") ) return false;
- if ( !(in >> ei) || !check_sep(",") ) return false;
-- if (ei >= 0 && ei < en)
-+ if (ei >= 0 && (std::size_t) ei < en)
- {
- f->set_halfedge(Halfedge_of[ei]);
- }
-
- while (in >> ei) {
- CGAL_assertion_msg(ei >= 0 && (std::size_t) ei < en, "wrong index in face cycle list.");
-- if (!(ei >= 0 && ei < en))
-+ if (!(ei >= 0 && (std::size_t)ei < en))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -293,7 +293,7 @@ bool PM_io_parser<PMDEC>::read_face(Face_handle f)
- if (!check_sep(",")) { return false; }
- while (in >> vi) {
- CGAL_assertion_msg(vi >= 0 && (std::size_t) vi < vn, "wrong index in iso vertex list.");
-- if (!(vi >= 0 && vi < vn))
-+ if (!(vi >= 0 && (std::size_t)vi < vn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-diff --git a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-index e5530445153..1dde7f8d0b3 100644
---- a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-+++ b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-@@ -1579,7 +1579,7 @@ read_vertex(Vertex_handle vh) {
- vh->sncp() = this->sncp();
-
- in >> index;
-- if(index >= int(en))
-+ if(index >= (int)en)
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2016,7 +2016,7 @@ read_sloop(SHalfloop_handle slh) {
- OK = OK && test_string("{");
-
- in >> index;
-- if(index < 0 || index >= sln)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2024,7 +2024,7 @@ read_sloop(SHalfloop_handle slh) {
- slh->twin() = SLoop_of[index];
- OK = OK && test_string(",");
- in >> index;
-- if(index < 0 || index >= sfn)
-+ if(index < 0 || index >= (int)(sfn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2032,7 +2032,7 @@ read_sloop(SHalfloop_handle slh) {
- slh->incident_sface() = SFace_of[index];
- OK = OK && test_string(",");
- in >> index;
-- if(index < 0 || index >= fn)
-+ if(index < 0 || index >= (int)(fn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2083,7 +2083,7 @@ read_sface(SFace_handle sfh) {
- OK = OK && test_string("{");
-
- in >> index;
-- if(index < 0 || index >= vn)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2097,7 +2097,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- // sfh->boundary_entry_objects().push_back(SEdge_of[index]);
- SM_decorator SD(&*sfh->center_vertex());
-- if(index < 0 || index >= sen)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2110,7 +2110,7 @@ read_sface(SFace_handle sfh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-- if(index < 0 || index >= en)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2124,7 +2124,7 @@ read_sface(SFace_handle sfh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-- if(index < 0 || index >= sln)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2135,7 +2135,7 @@ read_sface(SFace_handle sfh) {
- }
-
- in >> index;
-- if(index < 0 || index >= vn)
-+ if(index < 0 || index >= (int)(sln))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-
-From 23cc6b0f4a2ac6061b01d86411d58b6da7ff5a34 Mon Sep 17 00:00:00 2001
-From: Maxime Gimeno <maxime.gimeno@gmail.com>
-Date: Wed, 27 Jan 2021 10:04:45 +0100
-Subject: [PATCH 7/8] Fix read_sface
-
----
- .../Convex_decomposition_3/check_decomposition.cpp | 2 ++
- Nef_3/include/CGAL/Nef_3/SNC_io_parser.h | 10 +++++-----
- 2 files changed, 7 insertions(+), 5 deletions(-)
-
-diff --git a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-index 1dde7f8d0b3..a31a07c5d99 100644
---- a/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-+++ b/Nef_3/include/CGAL/Nef_3/SNC_io_parser.h
-@@ -1803,7 +1803,7 @@ read_facet(Halffacet_handle fh) {
- }
-
- in >> index;
-- if(index < 0 || index >= int(vn))
-+ if(index < 0 || index >= int(cn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2083,7 +2083,7 @@ read_sface(SFace_handle sfh) {
- OK = OK && test_string("{");
-
- in >> index;
-- if(index < 0 || index >= (int)(sln))
-+ if(index < 0 || index >= (int)(vn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2097,7 +2097,7 @@ read_sface(SFace_handle sfh) {
- in >> index;
- // sfh->boundary_entry_objects().push_back(SEdge_of[index]);
- SM_decorator SD(&*sfh->center_vertex());
-- if(index < 0 || index >= (int)(sln))
-+ if(index < 0 || index >= (int)(sen))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2110,7 +2110,7 @@ read_sface(SFace_handle sfh) {
- while(isdigit(cc)) {
- in.putback(cc);
- in >> index;
-- if(index < 0 || index >= (int)(sln))
-+ if(index < 0 || index >= (int)(en))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-@@ -2135,7 +2135,7 @@ read_sface(SFace_handle sfh) {
- }
-
- in >> index;
-- if(index < 0 || index >= (int)(sln))
-+ if(index < 0 || index >= (int)(cn))
- {
- in.setstate(std::ios_base::badbit);
- return false;
-