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-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 8 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 8ca3d120c4..50f1a182e7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2243,6 +2243,14 @@ and more accurate. BWA-MEM also has better performance than BWA-backtrack for
(base32
"076c4q0cdqz8jgylb067y9zmvxglppnzi3qiscn0xiypgc6lgb5r"))))
(build-system gnu-build-system)
+ (arguments
+ (substitute-keyword-arguments (package-arguments bwa)
+ ((#:phases phases '%standard-phases)
+ `(modify-phases ,phases
+ (add-after 'unpack 'patch-C-error
+ (lambda _
+ (substitute* "pssm.c"
+ (("inline int map") "int map"))))))))
(inputs
`(("gdsl" ,gdsl)
("zlib" ,zlib)