diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/astronomy.scm | 86 |
1 files changed, 46 insertions, 40 deletions
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 11cdd9e862..9db5b080cc 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1499,46 +1499,52 @@ accurately in real time at any rate desired.") (for-each delete-file-recursively '("expat" "wcslib"))))))) (build-system python-build-system) (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'preparations - (lambda _ - ;; Use our own libraries in place of bundles. - (setenv "ASTROPY_USE_SYSTEM_ALL" "1") - ;; Some tests require a writable home. - (setenv "HOME" "/tmp") - ;; Relax xfail tests. - (substitute* "pyproject.toml" - (("xfail_strict = true") "xfail_strict = false")) - ;; Replace reference to external ply. - (substitute* "astropy/utils/parsing.py" - (("astropy.extern.ply") "ply")) - ;; Replace reference to external configobj. - (with-directory-excursion "astropy/config" - (substitute* "configuration.py" - (("from astropy.extern.configobj ") ""))))) - ;; This file is opened in both install and check phases. - (add-before 'install 'writable-compiler - (lambda _ (make-file-writable "astropy/_compiler.c"))) - (add-before 'check 'writable-compiler - (lambda _ (make-file-writable "astropy/_compiler.c"))) - (replace 'check - (lambda* (#:key inputs outputs tests? #:allow-other-keys) - (when tests? - (add-installed-pythonpath inputs outputs) - ;; Extensions have to be rebuilt before running the tests. - (invoke "python" "setup.py" "build_ext" "--inplace") - (invoke "python" "-m" "pytest" "--pyargs" "astropy" - ;; Skip tests that need remote data. - "-k" (string-append - "not remote_data" - ;; XXX: Check why this tests failing. - " and not test_ignore_sigint" - " and not test_parquet_filter" - ;; See https://github.com/astropy/astropy/issues/15537 - " and not test_pvstar" - ;; E ModuleNotFoundError: No module named 'wofz' - " and not test_pickle_functional")))))))) + (list + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'preparations + (lambda _ + ;; Use our own libraries in place of bundles. + (setenv "ASTROPY_USE_SYSTEM_ALL" "1") + ;; Relax xfail tests. + (substitute* "pyproject.toml" + (("xfail_strict = true") "xfail_strict = false")) + ;; Replace reference to external ply. + (substitute* "astropy/utils/parsing.py" + (("astropy.extern.ply") "ply")) + ;; Replace reference to external configobj. + (substitute* "astropy/config/configuration.py" + (("from astropy.extern.configobj ") "")))) + ;; This file is opened in both install and check phases. + (add-before 'install 'writable-compiler + (lambda _ + (make-file-writable "astropy/_compiler.c"))) + (add-before 'check 'prepare-test-environment + (lambda _ + ;; Some tests require a writable home. + (setenv "HOME" "/tmp") + (make-file-writable "astropy/_compiler.c") + ;; Extensions have to be rebuilt before running the tests. + (invoke "python" "setup.py" "build_ext" "--inplace" + "-j" (number->string (parallel-job-count))))) + ;; TODO: The swap to pyproject-build-system introduced all tests + ;; failed due to pytest could not load conftest.py, find out how + ;; to resolve it and migrate completely to pyproject-build-system. + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "python" "-m" "pytest" "--pyargs" "astropy" + ;; with -n : 133.00s + ;; without -n : 326.14s + "-n" (number->string (parallel-job-count)) + "-k" (string-append + ;; Skip tests that need remote data. + "not remote_data" + ;; E astropy.samp.errors.SAMPProxyError: + ;; <SAMPProxyError 1: 'Timeout expired!'> + " and not test_main" + ;; E ModuleNotFoundError: No module named 'wofz' + " and not test_pickle_functional")))))))) (native-inputs (list pkg-config python-colorlog |