diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a66cc22fff..3dc8c61c4e 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1610,6 +1610,33 @@ array-like objects like @code{DataFrame} objects (typically with Rle columns), @code{Matrix} objects, and ordinary arrays and data frames.") (license license:artistic2.0))) +(define-public r-derfinderhelper + (package + (name "r-derfinderhelper") + (version "1.28.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "derfinderHelper" version)) + (sha256 + (base32 "06x0wy2wzpngak1pnrj2p0xzlx1nbcz0hs3p9q5ic6ib2rgwrh35")))) + (properties `((upstream-name . "derfinderHelper"))) + (build-system r-build-system) + (propagated-inputs + `(("r-iranges" ,r-iranges) + ("r-matrix" ,r-matrix) + ("r-s4vectors" ,r-s4vectors))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/leekgroup/derfinderHelper") + (synopsis "Helper for derfinder") + (description + "This package speeds up the derfinder package when using multiple cores. +It is particularly useful when using BiocParallel and it helps reduce the time +spent loading the full derfinder package when running the F-statistics +calculation in parallel.") + (license license:artistic2.0))) + (define-public r-bluster (package (name "r-bluster") |