diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/julia.scm | 113 |
1 files changed, 49 insertions, 64 deletions
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm index 78488a4e99..65fa726d92 100644 --- a/gnu/packages/julia.scm +++ b/gnu/packages/julia.scm @@ -2,6 +2,7 @@ ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016, 2020 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz> +;;; Copyright © 2020 Tim Howes <timhowes@lavabit.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -53,7 +54,7 @@ (let ((commit "35b1504507a7a4168caae3d78db54d1121b121e1") (revision "1")) ;; When upgrading Julia, also upgrade this. Get the commit from - ;; https://github.com/JuliaLang/julia/blob/v1.4.1/deps/libuv.version + ;; https://github.com/JuliaLang/julia/blob/v1.5.2/deps/libuv.version (package (inherit libuv) (name "libuv-julia") @@ -103,7 +104,7 @@ "/deps/patches/" name ".patch")) (define (julia-patch name sha) - (let ((version "1.4.1")) + (let ((version "1.5.2")) (origin (method url-fetch) (uri (julia-patch-url version name)) (sha256 (base32 sha)) @@ -111,63 +112,52 @@ (define llvm-julia (package - (inherit llvm-8) + (inherit llvm-9) (name "llvm-julia") (source (origin - (inherit (package-source llvm-8)) + (inherit (package-source llvm-9)) ;; Those patches are inside the Julia source repo. ;; They are _not_ Julia specific (https://github.com/julialang/julia#llvm) ;; but they are required to build Julia. ;; Discussion: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919628 (patches - (map (match-lambda - ((name hash) - (julia-patch name hash))) - (list - '("llvm-7.0-D44650" - "1h55kkmkiisfj6sk956if2bcj9s0v6n5czn8dxb870vp5nccj3ir") - '("llvm-6.0-DISABLE_ABI_CHECKS" - "014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg") - '("llvm-6.0-NVPTX-addrspaces" - "1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc") - '("llvm-D27629-AArch64-large_model_6.0.1" - "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z") - '("llvm8-D34078-vectorize-fdiv" - "19spqc3xsazn1xs9gpcgv9ldadfkv49rmc5khl7sf1dlmhgi4602") - '("llvm7-D50010-VNCoercion-ni" - "18scg6aa036xa1508s7q93w9dvc5gp69fz6yl6fkh4yffw4gymw6") - '("llvm-8.0-D50167-scev-umin" - "0g9w2x8yryjdkihnrf18x0yi5bi14c5p8wffda1w732dr5ckzk94") - '("llvm-D57118-powerpc" - "0vxz5s0s9b625v1rv8lg1566yhxh1i91ydzmvy5s7njvzc7p19aw") - '("llvm8-WASM-addrspaces" - "1176agj9hh7csdm2lnklb42zcdsb3q6lx9jiyp2shn4p2678y76q") - '("llvm-exegesis-mingw" - "0ph1cj1j7arvf1xq2xcr7qf9g0cpdl14fincgr67vpi520zvd3vp") - '("llvm-test-plugin-mingw" - "12z738cnahbf6n381im7i0hxp1m6k9hrnfjlmq9sac46nxly9gnj") - '("llvm-8.0-D66401-mingw-reloc" - "15v3p5sznn979cfnd7gdn3nd701fd7xd5aks6lnj1mslvljlq3ls") - '("llvm7-revert-D44485" - "0f59kq3p3mpwsbmskypbi4zn01l6ig0x7v2rjp08k2r8z8m6fa8n") - '("llvm-8.0-D63688-wasm-isLocal" - "0i9wi5n63ip3802z6m7aj3p07hkqjlmp4vg4wq3xkf9f6w9rksab") - '("llvm-8.0-D55758-tablegen-cond" - "1l08mg7qigravi7plsq3yzya80fljnp95n8faddr29wbr2qr0655") - '("llvm-8.0-D59389-refactor-wmma" - "0rgrwk4xlwpk7yai2j7xadcfws93rmk2hhh44fysa88imvrbp478") - '("llvm-8.0-D59393-mma-ptx63-fix" - "094jcsxbcx9fljj623mgmc0rjpk12s2rs0di0ck0hakzhr8mbv5n") - '("llvm-8.0-D66657-codegen-degenerate" - "1n1ddx19h90bbpimdyd9dh8fsm6gb93xxyqm4ljkxa1k3cx2vm72") - '("llvm-8.0-D71495-vectorize-freduce" - "1zff08wvji9lnpskk4b3p5zyjsy5hhy23ynxjqlj9dw7jvvfrf0p") - '("llvm-8.0-D75072-SCEV-add-type" - "0amlyyndsc90ml2k6prdahf24q0j23nfmlbqf8gcqcxpl5sqq3i6") - '("llvm-8.0-D65174-limit-merge-stores" - "1ls5114fhgip9rbqabqc16mi367ra0k75ngc1vyqqhq1ghm9x7y9")))))) + (map (match-lambda + ((name hash) + (julia-patch name hash))) + (list + '("llvm-D27629-AArch64-large_model_6.0.1" + "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z") + '("llvm8-D34078-vectorize-fdiv" + "19spqc3xsazn1xs9gpcgv9ldadfkv49rmc5khl7sf1dlmhgi4602") + '("llvm-7.0-D44650" + "1h55kkmkiisfj6sk956if2bcj9s0v6n5czn8dxb870vp5nccj3ir") + '("llvm9-D50010-VNCoercion-ni" + "1s1d3sjsiq4vxg7ncy5cz56zgy5vcq6ls3iqaiqkvr23wyryqmdx") + '("llvm-exegesis-mingw" + "0ph1cj1j7arvf1xq2xcr7qf9g0cpdl14fincgr67vpi520zvd3vp") + '("llvm-test-plugin-mingw" + "12z738cnahbf6n381im7i0hxp1m6k9hrnfjlmq9sac46nxly9gnj") + '("llvm7-revert-D44485" + "0f59kq3p3mpwsbmskypbi4zn01l6ig0x7v2rjp08k2r8z8m6fa8n") + '("llvm-8.0-D66657-codegen-degenerate" + "1n1ddx19h90bbpimdyd9dh8fsm6gb93xxyqm4ljkxa1k3cx2vm72") + '("llvm-8.0-D71495-vectorize-freduce" + "1zff08wvji9lnpskk4b3p5zyjsy5hhy23ynxjqlj9dw7jvvfrf0p") + '("llvm-D75072-SCEV-add-type" + "029a3fywsm233vf48mscina24idd50dc75wr70lmimrhwnw27p0z") + '("llvm-9.0-D65174-limit-merge-stores" + "04bff1mnblfj9mxfdwr1qdnw3i3szmp60gnhxwas5y68qg33z6j0") + '("llvm9-D71443-PPC-MC-redef-symbol" + "1c93nv7rgc9jg5mqrnvv08xib1789qvlql94fwggh18mp3b9hbgy") + '("llvm-9.0-D78196" + "08a43hyg7yyqjq2vmfsmppf34xcz60wq6y9zw5fdyhw2h1mcnmns") + '("llvm-julia-tsan-custom-as" + "0awh40kf6lm4wn1nsjd1bmhfwq7rqj811szanp2xkpspykw9hg9s") + '("llvm-9.0-D85499" + "0vxlr35srvbvihlgrxq15v6dylp90vgi0qahj22j01jgqmdasjkm")))) + (patch-flags '("-p1")))) (arguments - (substitute-keyword-arguments (package-arguments llvm-8) + (substitute-keyword-arguments (package-arguments llvm-9) ((#:configure-flags flags) `(list ;; Taken from NixOS. Only way I could get libLLVM-6.0.so "-DCMAKE_BUILD_TYPE=Release" @@ -231,7 +221,7 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (define-public julia (package (name "julia") - (version "1.4.1") + (version "1.5.2") (source (origin (method url-fetch) (uri (string-append @@ -239,7 +229,7 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") version "/julia-" version ".tar.gz")) (sha256 (base32 - "030aza3qj5zcinxbrbqgi7p64q6klwq2bhwccraarx7l0hg9lw3i")) + "08wazf3f1lb2c2c5s700kyak8llfqwki8xlnqyrbwmwxjj801p2n")) (patches (search-patches "julia-SOURCE_DATE_EPOCH-mtime.patch")))) (build-system gnu-build-system) @@ -344,16 +334,6 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") "tests = filter(e->!in(e,[\"backtrace\",\"exceptions\",\"precompile\", \"client\",\"stacktraces\"]), testnames)")) - ;; precompile test is broken, fixed in - ;; fed29f893544d1dc8f86444c65d632c68168d0f3 - (substitute* "test/precompile.jl" - (("@test !isdefined\\(Base.Nothing.name.mt") - "# @test !isdefined(Base.Nothing.name.mt")) - ;; When HOME is not set, julia calls uv_os_homedir, which in - ;; turns call getpwuid_r. Add the HOME env variable to the - ;; external julia call to fix this - (substitute* "test/cmdlineargs.jl" - (("\"JULIA_PROJECT\"") "\"HOME\"=>\"/tmp\", \"JULIA_PROJECT\"")) ;; Marking the test as broken as it's a known bug: ;; https://github.com/JuliaLang/julia/issues/32377 (substitute* "stdlib/REPL/test/replcompletions.jl" @@ -361,11 +341,16 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") ;; Dates has a similar bug: ;; https://github.com/JuliaLang/julia/issues/34655 (substitute* "stdlib/Dates/test/io.jl" + (("\"Dates.Date") "\"Date") (("\"Dates.Time") "\"Time")) ;; Upstream bug I found when packaging ;; https://github.com/JuliaLang/julia/issues/35785 (substitute* "test/file.jl" (("@test dirname\\(t\\) == d") "@test_broken dirname(t) == d")) + ;; Deprecation test fails with --depwarn=no + ;; https://github.com/JuliaLang/julia/issues/37673 + (substitute* "test/Makefile" + (("./runtests.jl") "--depwarn=error ./runtests.jl")) #t)) (add-after 'install 'make-wrapper (lambda* (#:key inputs outputs #:allow-other-keys) @@ -416,7 +401,7 @@ libraries. It is also a bit like @code{ldd} and @code{otool -L}.") (assoc-ref %build-inputs "utf8proc") "/include") "USE_SYSTEM_LLVM=1" - "LLVM_VER=8.0.0" + "LLVM_VER=9.0.1" "USE_LLVM_SHLIB=1" "USE_SYSTEM_LIBUNWIND=1" |