diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b76aadc6a2..bcb27571a1 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -922,6 +922,34 @@ also includes an interface for tabix.") (define-public python2-pysam (package-with-python2 python-pysam)) +(define-public python-twobitreader + (package + (name "python-twobitreader") + (version "3.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "twobitreader" version)) + (sha256 + (base32 + "0y408fp6psqzwxpcpqn0wp7fr41dwz8d54wpj6j261fj5q8vs169")))) + (properties `((python2-variant . ,(delay python2-twobitreader)))) + (build-system python-build-system) + (native-inputs + `(("python-sphinx" ,python-sphinx))) + (home-page "https://github.com/benjschiller/twobitreader") + (synopsis "Python library for reading .2bit files") + (description + "twobitreader is a Python library for reading .2bit files as used by the +UCSC genome browser.") + (license license:artistic2.0))) + +(define-public python2-twobitreader + (let ((base (package-with-python2 (strip-python2-variant python-twobitreader)))) + (package + (inherit base) + (native-inputs `(("python2-setuptools" ,python2-setuptools) + ,@(package-native-inputs base)))))) + (define-public cd-hit (package (name "cd-hit") |