diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 110 |
1 files changed, 57 insertions, 53 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index c837be2269..5ab2c5e764 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -507,14 +507,14 @@ D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.") (define-public r-mass (package (name "r-mass") - (version "7.3-57") + (version "7.3-58.1") (source (origin (method url-fetch) (uri (cran-uri "MASS" version)) (sha256 (base32 - "13asg609szqq8d1a4ybr508qcanr9gvqd439vfras6mw0l0qi2xx")))) + "080l4gqkaw9r4s7b0q9hda489rn24p4ma5xf4g8405qkzgif817p")))) (properties `((upstream-name . "MASS"))) (build-system r-build-system) (home-page "http://www.stats.ox.ac.uk/pub/MASS4/") @@ -974,13 +974,13 @@ OpenSSL should be used.") (define-public r-estimability (package (name "r-estimability") - (version "1.3") + (version "1.4.1") (source (origin (method url-fetch) (uri (cran-uri "estimability" version)) (sha256 (base32 - "0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3")))) + "090i1xwdp4fwj8jr8nk13w49516lfkk5mq1w7l0lff9g8lgaynn6")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/estimability") (synopsis "Tools for assessing estimability of linear predictions") @@ -1160,14 +1160,14 @@ solution for sending email, including attachments, from within R.") (define-public r-stringi (package (name "r-stringi") - (version "1.7.6") + (version "1.7.8") (source (origin (method url-fetch) (uri (cran-uri "stringi" version)) (sha256 (base32 - "1v0rj5svgvn1mlf69yzm6jm00fxmrsxazs9xymzrf0apxjpxb8qf")))) + "074b8wky3dhm4vcdqliwz6cqw20ah2x4dcasvnidilbfrnqii2ak")))) (build-system r-build-system) (inputs (list icu4c)) (native-inputs (list pkg-config)) @@ -1756,13 +1756,13 @@ defined in different packages.") (define-public r-rlang (package (name "r-rlang") - (version "1.0.3") + (version "1.0.4") (source (origin (method url-fetch) (uri (cran-uri "rlang" version)) (sha256 (base32 - "0ghfbs0sw502hk5amxr8i5lwgv6vyqcq2a2liqf57k9dm6qlik04")))) + "15l65as409b3y9sn1jm7lb2019jsp19w6qxsgvimr1badka8kdqz")))) (build-system r-build-system) (home-page "http://rlang.tidyverse.org") (synopsis "Functions for base types, core R and Tidyverse features") @@ -1774,18 +1774,17 @@ like tidy evaluation.") (define-public r-tibble (package (name "r-tibble") - (version "3.1.7") + (version "3.1.8") (source (origin (method url-fetch) (uri (cran-uri "tibble" version)) (sha256 (base32 - "0wn8j7slfqrdl126g536sg1xkrvjd9rlsk0bjqk3b03nyj8hi9g1")))) + "1spdbk5s0wlipfq8jc08p2mk5fq2ql9hm8iwwlfzdlhqbl3hxwxc")))) (build-system r-build-system) (propagated-inputs - (list r-ellipsis - r-fansi + (list r-fansi r-lifecycle r-magrittr r-pkgconfig @@ -1923,14 +1922,14 @@ side.") (define-public r-locfit (package (name "r-locfit") - (version "1.5-9.5") + (version "1.5-9.6") (source (origin (method url-fetch) (uri (cran-uri "locfit" version)) (sha256 (base32 - "08yywswywmvyys8380576n43h3xyiviq1p2392zcivlbknnjp7zx")))) + "0xilf6gp3m8xla2fvxr491j31pvim707mnhswvm9yxnb0d09xs0y")))) (build-system r-build-system) (propagated-inputs (list r-lattice)) @@ -2399,13 +2398,13 @@ tables, autolinks and strikethrough text.") (define-public r-roxygen2 (package (name "r-roxygen2") - (version "7.2.0") + (version "7.2.1") (source (origin (method url-fetch) (uri (cran-uri "roxygen2" version)) (sha256 (base32 - "12s436jn7aagjpc2lnlrhzwqgsdl8lbbwhkddih6rnxrczawzgrf")))) + "08fs5jw6npriqsr8pribs2yy1r8163xzcv4gmlgmcaywj4jk9w6j")))) (build-system r-build-system) (propagated-inputs (list r-brew @@ -2544,33 +2543,34 @@ informative error messages when it's not available.") (define-public r-devtools (package (name "r-devtools") - (version "2.4.3") + (version "2.4.4") (source (origin (method url-fetch) (uri (cran-uri "devtools" version)) (sha256 (base32 - "0kvbw218jp8pd2lgdjyn94v2iji75s385hkn1qbikcm0pjlmj8g4")))) + "0kckjr12qi8nw498x3iw648pllz63j5p6fhpv8z8jc4z4sfpbmmc")))) (build-system r-build-system) (propagated-inputs - (list r-callr - r-cli + (list r-cli r-desc r-ellipsis r-fs - r-httr r-lifecycle r-memoise + r-miniui r-pkgbuild + r-pkgdown r-pkgload + r-profvis r-rcmdcheck r-remotes r-rlang r-roxygen2 - r-rstudioapi r-rversions r-sessioninfo r-testthat + r-urlchecker r-usethis r-withr)) (native-inputs @@ -2693,18 +2693,23 @@ scaling functions for R.") (define-public r-latticeextra (package (name "r-latticeextra") - (version "0.6-29") + (version "0.6-30") (source (origin (method url-fetch) (uri (cran-uri "latticeExtra" version)) (sha256 (base32 - "04fzwcqs594rk5qp98yilh3kdh3sw4xf8wld5rp94ggpaqfw7bbc")))) + "1vcy4xr6c53nbvnxikjnlf5kd3n5hf4d8dzj5d41hj322dlsfl65")))) (properties `((upstream-name . "latticeExtra"))) (build-system r-build-system) (propagated-inputs - (list r-jpeg r-lattice r-png r-rcolorbrewer)) + (list r-interp + r-jpeg + r-lattice + r-mass + r-png + r-rcolorbrewer)) (home-page "http://latticeextra.r-forge.r-project.org/") (synopsis "Extra graphical utilities based on lattice") (description @@ -2923,13 +2928,13 @@ a column in data frame.") (define-public r-rsqlite (package (name "r-rsqlite") - (version "2.2.14") + (version "2.2.15") (source (origin (method url-fetch) (uri (cran-uri "RSQLite" version)) (sha256 (base32 - "0z307d7rx7blh2apc9dbw9vgad2ldbf9vbdjhmwlj0mwbs3nmqra")))) + "1cypz9i85fnp3izk0px9r8s3l1jwn5kmgs2avc0fi3fad1775029")))) (properties `((upstream-name . "RSQLite"))) (build-system r-build-system) (propagated-inputs @@ -2953,13 +2958,13 @@ engine (version 3.8.8.2) is included.") (define-public r-rcurl (package (name "r-rcurl") - (version "1.98-1.7") + (version "1.98-1.8") (source (origin (method url-fetch) (uri (cran-uri "RCurl" version)) (sha256 (base32 - "138qfkw03j0g5wby24811w9f3virz1fxlgkgnavf6gv3c00jvhia")))) + "0a4gr264ycy6am4849y79h3vc9vg7cgpizb88v4xw076pyn52fqy")))) (properties `((upstream-name . "RCurl"))) (build-system r-build-system) (arguments @@ -2976,7 +2981,7 @@ if (certs != \"\") { .opts = merge.list(.opts, list(cainfo=certs)) } (native-inputs (list libxml2)) (inputs - (list curl)) + (list curl zlib)) (propagated-inputs (list r-bitops)) (home-page "http://www.omegahat.net/RCurl") @@ -3991,13 +3996,13 @@ developing R packages.") (define-public r-r-cache (package (name "r-r-cache") - (version "0.15.0") + (version "0.16.0") (source (origin (method url-fetch) (uri (cran-uri "R.cache" version)) (sha256 (base32 - "09pipn1974ivjh4sm3n5fjlh31rilf87p30qwq7y25vriyqd7d5d")))) + "14cja0d78mzipb94cwgdl00k5r7awjclzxl30c77j6jpc68l0lvq")))) (properties `((upstream-name . "R.cache"))) (build-system r-build-system) (arguments @@ -4588,14 +4593,14 @@ Zurich, including many that are related to graphics.") (define-public r-gtools (package (name "r-gtools") - (version "3.9.2.2") + (version "3.9.3") (source (origin (method url-fetch) (uri (cran-uri "gtools" version)) (sha256 (base32 - "0hyqh1r9vxy7hfnir22439k4jlk4adcxdf78ryz5bk06blvqc81m")))) + "0criwc0jmbrgaslh2kdjirgdzbf0ycry8yjryi95fb9qgckm7yvs")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/gtools") (synopsis "Various R programming tools") @@ -5218,14 +5223,14 @@ regression methodology including model selections and multivariate statistics.") (define-public r-pcapp (package (name "r-pcapp") - (version "2.0-1") + (version "2.0-2") (source (origin (method url-fetch) (uri (cran-uri "pcaPP" version)) (sha256 (base32 - "06hjhr0dzdp5yhd421q9scbv6w6bchicbn2bl7am490ncgrf544n")))) + "0jxm1cl48bzfi0s0f2b0y0r5nq7x0iypgkasa3v5myhb9sbnd2x1")))) (properties `((upstream-name . "pcaPP"))) (build-system r-build-system) (propagated-inputs @@ -5291,14 +5296,14 @@ generally.") (define-public r-robust (package (name "r-robust") - (version "0.7-0") + (version "0.7-1") (source (origin (method url-fetch) (uri (cran-uri "robust" version)) (sha256 (base32 - "1fc4h19b7gn9ya2j2ia8vfgsycwlyc23frj54k11dr45w4qaq6jy")))) + "1pv5xvns3p8dpaadf6v0fqz099ml768ahgp271wpiclrcc6cgapg")))) (build-system r-build-system) (propagated-inputs (list r-fit-models r-lattice r-mass r-robustbase r-rrcov)) @@ -5368,13 +5373,13 @@ groupings.") (define-public r-vgam (package (name "r-vgam") - (version "1.1-6") + (version "1.1-7") (source (origin (method url-fetch) (uri (cran-uri "VGAM" version)) (sha256 - (base32 "05yl1lbpambwg3i3rqn6aanaym7c3s8g7hi0bph98iyxqnx62sj4")))) + (base32 "0zkmj7crkkvi7ki88f6vfn7x8gf0ycrbg13wann7wirj4cwjvid4")))) (properties `((upstream-name . "VGAM"))) (build-system r-build-system) (native-inputs @@ -5503,13 +5508,13 @@ using modular prediction and response module classes.") (define-public r-quantreg (package (name "r-quantreg") - (version "5.93") + (version "5.94") (source (origin (method url-fetch) (uri (cran-uri "quantreg" version)) (sha256 - (base32 "0fg5x6sa8mz2hh9nak0wajh4l6h03x216462vs94rgq0ln24kafl")))) + (base32 "1h8p3gzaas8gdvyh13ir8xc92hiybmizb0yhnwk7gvbjp768bmaj")))) (build-system r-build-system) (arguments `(#:phases @@ -5562,14 +5567,14 @@ algorithms.") (define-public r-lme4 (package (name "r-lme4") - (version "1.1-29") + (version "1.1-30") (source (origin (method url-fetch) (uri (cran-uri "lme4" version)) (sha256 (base32 - "09p836an3pap7vdbhf1zkl0a7wc63ax2dc8mjrd6lw64ikj7vnc3")))) + "03rhg6cnsvdk06a1yxkivfvfwlx9934nd9q6jnp0bzscnv2dzazx")))) (build-system r-build-system) (propagated-inputs (list r-boot @@ -5856,14 +5861,14 @@ genome-wide association studies can be analyzed efficiently.") (define-public r-cairo (package (name "r-cairo") - (version "1.5-15") + (version "1.6-0") (source (origin (method url-fetch) (uri (cran-uri "Cairo" version)) (sha256 (base32 - "17g8s80h9kc0a4zpb153sprjm6ndjl3gkpb63aq5xh9ickzv2fmv")))) + "1lxpmzy6k8y9b6g7x68x0giy8bblxmbc4q136hkzajmailfsqqn7")))) (properties `((upstream-name . "Cairo"))) (build-system r-build-system) (inputs @@ -6624,7 +6629,7 @@ or eta squared effect size.") (description "Contains routines for logspline density estimation. The function @code{oldlogspline()} uses the same algorithm as the logspline package version -1.0.x; i.e. the Kooperberg and Stone (1992) algorithm (with an improved +1.0.x; i.e., the Kooperberg and Stone (1992) algorithm (with an improved interface). The recommended routine @code{logspline()} uses an algorithm from @url{doi:10.1214/aos/1031594728,Stone et al (1997)}.") (license license:asl2.0))) @@ -6632,14 +6637,14 @@ interface). The recommended routine @code{logspline()} uses an algorithm from (define-public r-effects (package (name "r-effects") - (version "4.2-1") + (version "4.2-2") (source (origin (method url-fetch) (uri (cran-uri "effects" version)) (sha256 (base32 - "0h3n2kd43fddy29hlv1nckw3wglykwrgk1hp8khb0pnm2i12b5sk")))) + "0nlj79am9a1yg737dhfa8dj1kj2hly9pfknmphsbcvlgxqn35vig")))) (properties `((upstream-name . "effects"))) (build-system r-build-system) (propagated-inputs @@ -6652,7 +6657,7 @@ interface). The recommended routine @code{logspline()} uses an algorithm from r-nnet r-survey)) (native-inputs - (list r-knitr r-car)) + (list r-knitr)) (home-page "https://www.r-project.org") (synopsis "Effect Displays for Linear, Generalized Linear, and Other Models") @@ -6664,19 +6669,18 @@ various statistical models with linear predictors.") (define-public r-bayesfactor (package (name "r-bayesfactor") - (version "0.9.12-4.3") + (version "0.9.12-4.4") (source (origin (method url-fetch) (uri (cran-uri "BayesFactor" version)) (sha256 (base32 - "171hbr445v8mq4hqi1k8q3h8zqsccwjv0a2mj98h9b77667ziyfw")))) + "02bhlamnkxp9wqi2cp1i0dxmqdf3y3l872ad9z39xwripbi4kc7a")))) (properties `((upstream-name . "BayesFactor"))) (build-system r-build-system) (propagated-inputs (list r-coda - r-gtools r-hypergeo r-matrix r-matrixmodels |