diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 79 |
1 files changed, 61 insertions, 18 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 712b1a9c37..80d8ff2f93 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -18,6 +18,7 @@ ;;; Copyright © 2021 Frank Pursel <frank.pursel@gmail.com> ;;; Copyright © 2022 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2023 gemmaro <gemmaro.dev@gmail.com> +;;; Copyright © 2023 Troy Figiel <troy@troyfigiel.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -1430,13 +1431,13 @@ R/DBMS implementations.") (define-public r-bh (package (name "r-bh") - (version "1.81.0-1") + (version "1.84.0-0") (source (origin (method url-fetch) (uri (cran-uri "BH" version)) (sha256 (base32 - "0r7zjxpbm2paliplprwf9769a57clqaiskiiadiy10gissnqn77m")))) + "1b7igvvy9f13l969a26j2bdzib2laq3m4w1x0xsxjb2pbxsn1dkg")))) (build-system r-build-system) (home-page "https://github.com/eddelbuettel/bh") (synopsis "R package providing subset of Boost headers") @@ -1781,13 +1782,13 @@ defined in different packages.") (define-public r-rlang (package (name "r-rlang") - (version "1.1.2") + (version "1.1.3") (source (origin (method url-fetch) (uri (cran-uri "rlang" version)) (sha256 (base32 - "14l0dz36wav2jbz0dd3w34va68lrhr7fgd9dqf1v4nawdvff23ia")))) + "02mz53g8lk26yi0js6qq57ijhl1mw7xm82vwbwzbvi62bm5l58r4")))) (build-system r-build-system) (home-page "http://rlang.tidyverse.org") (synopsis "Functions for base types, core R and Tidyverse features") @@ -3032,13 +3033,13 @@ time-of-day values, based on the @code{difftime} class.") (define-public r-readr (package (name "r-readr") - (version "2.1.4") + (version "2.1.5") (source (origin (method url-fetch) (uri (cran-uri "readr" version)) (sha256 (base32 - "03gbzf29kdvf4rdqgdq2jm7c9ifjla3qzpiyqzw1x9jgijj4y54q")))) + "02p1jjal73j39r49ba4jlvbx8bdqmm96nsdp47igyv54w1gmm9hg")))) (build-system r-build-system) (propagated-inputs (list r-cli @@ -3047,9 +3048,9 @@ time-of-day values, based on the @code{difftime} class.") r-crayon r-hms r-lifecycle - r-tibble r-r6 r-rlang + r-tibble r-tzdb r-vroom)) (native-inputs @@ -3372,13 +3373,13 @@ engine (version 3.8.8.2) is included.") (define-public r-rcurl (package (name "r-rcurl") - (version "1.98-1.13") + (version "1.98-1.14") (source (origin (method url-fetch) (uri (cran-uri "RCurl" version)) (sha256 (base32 - "01pkmip1sllislmp34c25i9m9mlrid9b48xfjbf93sml55ijz985")))) + "1kq3ydvm7hvy8pxk9iy13pkq5mxyxqlx4mpjsadzl7a7jj32gbgf")))) (properties `((upstream-name . "RCurl"))) (build-system r-build-system) (arguments @@ -3392,10 +3393,8 @@ engine (version 3.8.8.2) is included.") certs = Sys.getenv(\"CURL_CA_BUNDLE\") if (certs != \"\") { .opts = merge.list(.opts, list(cainfo=certs)) } " m)))))))) - (native-inputs - (list libxml2)) (inputs - (list curl)) + (list curl libxml2)) (propagated-inputs (list r-bitops)) (home-page "https://www.omegahat.net/RCurl") @@ -4181,13 +4180,13 @@ computation, bagged clustering, naive Bayes classifier, and more.") (define-public r-bigmemory-sri (package (name "r-bigmemory-sri") - (version "0.1.6") + (version "0.1.8") (source (origin (method url-fetch) (uri (cran-uri "bigmemory.sri" version)) (sha256 - (base32 "03468ak0lgd9m0f7synxms2zzr8f7n2nm1gmhcraj3nfcv4nmyiv")))) + (base32 "0wbpk3naipl0ab3wnixnp2n874kazrapv1c31fi3cxm19b94x6h2")))) (properties `((upstream-name . "bigmemory.sri"))) (build-system r-build-system) @@ -4201,14 +4200,14 @@ bigmemory and synchronicity packages.") (define-public r-synchronicity (package (name "r-synchronicity") - (version "1.3.5") + (version "1.3.10") (source (origin (method url-fetch) (uri (cran-uri "synchronicity" version)) (sha256 (base32 - "1kgsk64aifjm3mfj102y3va7x1abypq2zi0cqbnjhl8fqyzp69hx")))) + "12svf4xzb9s3m1h2ddqgl6q2v57ifsj2p80j8cg2k0543a43pww2")))) (build-system r-build-system) (propagated-inputs (list r-bh r-bigmemory-sri r-rcpp r-uuid)) @@ -4223,14 +4222,14 @@ message passing.") (define-public r-bigmemory (package (name "r-bigmemory") - (version "4.6.1") + (version "4.6.4") (source (origin (method url-fetch) (uri (cran-uri "bigmemory" version)) (sha256 (base32 - "0hainqkm7cs8gjm42vkpdrr0284smsbwdfackp34yv7dhxy1avmm")))) + "0b80c2nsgphgr3cnvf75a0z3bzqx4q1a4dplq0h2izc71mn5fgzy")))) (build-system r-build-system) (propagated-inputs (list r-bh r-bigmemory-sri r-rcpp r-uuid)) @@ -6919,6 +6918,50 @@ files, including Rmarkdown files.") popular stats packages like SAS, Stata and SPSS.") (license license:expat))) +(define-public python-pyreadstat + (package + (name "python-pyreadstat") + (version "1.2.4") + ;; No tests in the PyPI tarball. + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Roche/pyreadstat") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0zysrzixvqw2lwwykxqg5yj8a0zyv5s2bmk22x30f4rj2hgvq1pv")) + (patches (search-patches "python-pyreadstat-link-libiconv.patch")))) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'check 'change-home-dir + (lambda _ + ;; test_sav_expand and test_sav_write_basic_expanduser need a + ;; home directory with write permissions. + (setenv "HOME" "/tmp"))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + ;; The source also contains tests/test_version.py + ;; which checks the version in __init__.py against the + ;; one in setup.py. Since this requires texlive + ;; dependencies to run and is also not mentioned in + ;; how_to_test.md, this test is skipped. + (invoke "python" "tests/test_basic.py"))))))) + (build-system python-build-system) + (propagated-inputs (list python-pandas)) + (inputs (list libiconv zlib)) + (native-inputs (list python-cython-3)) + (home-page "https://github.com/Roche/pyreadstat") + (synopsis + "Read and write SAS, SPSS and Stata files into/from Pandas DataFrames") + (description + "This Python package can be used to read and write SAS, SPSS and Stata +files into/from Pandas DataFrames. It is a wrapper around the C library +@code{readstat}.") + (license license:asl2.0))) + (define-public r-quantpsyc (package (name "r-quantpsyc") |