diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 148 |
1 files changed, 135 insertions, 13 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 44f6153011..b6d3ed3680 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr> +;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2014 John Darrington <jmd@gnu.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> @@ -29,6 +29,7 @@ #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix svn-download) #:use-module (guix utils) #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) @@ -65,7 +66,8 @@ #:use-module (gnu packages tcl) #:use-module (gnu packages texinfo) #:use-module (gnu packages texlive) - #:use-module (gnu packages xml)) + #:use-module (gnu packages xml) + #:use-module (gnu packages zip)) (define-public units (package @@ -236,7 +238,7 @@ be output in text, PostScript, PDF or HTML.") (description "ARPACK-NG is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.") - (license (license:bsd-style "file://COPYING" + (license (license:non-copyleft "file://COPYING" "See COPYING in the distribution.")))) (define-public lapack @@ -269,7 +271,7 @@ large scale eigenvalue problems.") (description "LAPACK is a Fortran 90 library for solving the most commonly occurring problems in numerical linear algebra.") - (license (license:bsd-style "file://LICENSE" + (license (license:non-copyleft "file://LICENSE" "See LICENSE in the distribution.")))) (define-public gnuplot @@ -316,6 +318,8 @@ plotting engine by third-party applications like Octave.") (sha256 (base32 "0f9n0v3p3lwc7564791a39c6cn1d3dbrn7d1j3ikqsi27a8hy23d")))) (build-system gnu-build-system) + (inputs + `(("zlib" ,zlib))) (arguments `(#:phases (alist-cons-before @@ -324,7 +328,6 @@ plotting engine by third-party applications like Octave.") (substitute* "configure" (("/bin/mv") "mv"))) %standard-phases))) - (outputs '("out" "bin" "lib" "include")) (home-page "http://www.hdfgroup.org") (synopsis "Management suite for extremely large and complex data") (description "HDF5 is a suite that makes possible the management of @@ -357,8 +360,7 @@ extremely large and complex data collections.") ("fltk" ,fltk) ("fontconfig" ,fontconfig) ("freetype" ,freetype) - ("hdf5-lib" ,hdf5 "lib") - ("hdf5-include" ,hdf5 "include") + ("hdf5" ,hdf5) ("libxft" ,libxft) ("mesa" ,mesa) ("zlib" ,zlib))) @@ -410,8 +412,7 @@ files.") `(("fltk" ,fltk) ("gfortran" ,gfortran-4.8) ("gmp" ,gmp) - ("hdf5-lib" ,hdf5 "lib") - ("hdf5-include" ,hdf5 "include") + ("hdf5" ,hdf5) ("lapack" ,lapack) ("mesa" ,mesa) ("glu" ,glu) @@ -521,7 +522,7 @@ ASCII text files using Gmsh's own scripting language.") (description "PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.") - (license (license:bsd-style + (license (license:non-copyleft "http://www.mcs.anl.gov/petsc/documentation/copyright.html")))) (define-public petsc-complex @@ -965,6 +966,105 @@ point numbers") ;; GPLv2 only is therefore the smallest subset. (license license:gpl2))) +(define-public muparser + (package + (name "muparser") + (version "2.2.5") + (source + (origin + (method svn-fetch) + (uri (svn-reference + (url "http://muparser.googlecode.com/svn/trunk/") + (revision 34))) + (sha256 + (base32 + "1d6bdbhx9zj3srwj3m7c9hvr18gnx1fx43h6d25my7q85gicpcwn")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags '("--enable-samples=no") + #:tests? #f)) ;no "check" target + (home-page "http://muparser.beltoforion.de/") + (synopsis "Fast parser library for mathematical expressions") + (description + "muParser is an extensible high performance math parser library. It is +based on transforming an expression into a bytecode and precalculating +constant parts of it.") + (license license:expat))) + +(define-public openlibm + (package + (name "openlibm") + (version "0.4.1") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/JuliaLang/openlibm/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0cwqqqlblj3kzp9aq1wnpfs1fl0qd1wp1xzm5shb09w06i4rh9nn")))) + (build-system gnu-build-system) + (arguments + `(#:make-flags + (list (string-append "prefix=" (assoc-ref %outputs "out"))) + #:phases + ;; no configure script + (alist-delete 'configure %standard-phases) + #:tests? #f)) ;the tests are part of the default target + (home-page "http://openlibm.org/") + (synopsis "Portable C mathematical library (libm)") + (description + "OpenLibm is an effort to have a high quality, portable, standalone C +mathematical library (libm). It can be used standalone in applications and +programming language implementations. The project was born out of a need to +have a good libm for the Julia programming langage that worked consistently +across compilers and operating systems, and in 32-bit and 64-bit +environments.") + ;; See LICENSE.md for details. + (license (list license:expat + license:isc + license:bsd-2 + license:public-domain + license:lgpl2.1+)))) + +(define-public openspecfun + (package + (name "openspecfun") + (version "0.4") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/JuliaLang/openspecfun/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "0nsa3jjmlhcqkw5ba5ypbn3n0c8b6lc22zzlxnmxkxi9shhdx65z")))) + (build-system gnu-build-system) + (arguments + '(#:tests? #f ;no "check" target + #:make-flags + (list (string-append "prefix=" (assoc-ref %outputs "out"))) + ;; no configure script + #:phases (alist-delete 'configure %standard-phases))) + (inputs + `(("fortran" ,gfortran-4.8))) + (home-page "https://github.com/JuliaLang/openspecfun") + (synopsis "Collection of special mathematical functions") + (description + "Openspecfun provides AMOS and Faddeeva. AMOS (from Netlib) is a +portable package for Bessel Functions of a Complex Argument and Nonnegative +Order; it contains subroutines for computing Bessel functions and Airy +functions. Faddeeva allows computing the various error functions of arbitrary +complex arguments (Faddeeva function, error function, complementary error +function, scaled complementary error function, imaginary error function, and +Dawson function); given these, one can also easily compute Voigt functions, +Fresnel integrals, and similar related functions as well.") + ;; Faddeeva is released under the Expat license; AMOS is included as + ;; public domain software. + (license (list license:expat license:public-domain)))) + (define-public atlas (package (name "atlas") @@ -998,7 +1098,7 @@ point numbers") (srfi srfi-1) (guix build gnu-build-system) (guix build utils)) - #:configure-flags + #:configure-flags `(;; Generate position independent code suitable for dynamic libraries ;; and use WALL timer to get more accurate timing. "-Fa" "alg" "-fPIC" "-D" "c" "-DWALL" @@ -1025,10 +1125,10 @@ point numbers") (alist-cons-after 'install 'install-doc (lambda* (#:key outputs inputs #:allow-other-keys) - (let ((doc (string-append (assoc-ref outputs "doc") + (let ((doc (string-append (assoc-ref outputs "doc") "/share/doc/atlas"))) (mkdir-p doc) - (fold (lambda (file previous) + (fold (lambda (file previous) (and previous (zero? (system* "cp" file doc)))) #t (find-files "../ATLAS/doc" ".*")))) (alist-cons-after @@ -1094,3 +1194,25 @@ cpufreq-selector -g performance -c N-1 where N is the number of cores of your CPU. Failure to do so will result in a library with poor performance.") (license license:bsd-3))) + +(define-public glm + (package + (name "glm") + (version "0.9.6.3") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/ogl-math/glm-" + version ".zip")) + (sha256 + (base32 + "1cnjmi033a16a95v6xfkr1bvfmkd26hzdjka8j1819hgn5b1nr8l")))) + (build-system cmake-build-system) + (native-inputs + `(("unzip" ,unzip))) + (home-page "http://glm.g-truc.net") + (synopsis "OpenGL Mathematics library") + (description "OpenGL Mathematics (GLM) is a header-only C++ mathematics +library for graphics software based on the OpenGL Shading Language (GLSL) +specifications.") + (license license:expat))) |