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| -rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index e9430b7412..18571d55a1 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -13986,6 +13986,34 @@ eliminating obsolete caches generated by old versions of packages.") package, primarily for creation of the underlying Conda instance.") (license license:gpl3))) +(define-public r-basilisk + (package + (name "r-basilisk") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "basilisk" version)) + (sha256 + (base32 + "1nzbn3f2jzvg3a3m6wgksi4cvamqas2q7csdk4ir7fcirasf536v")))) + (properties `((upstream-name . "basilisk"))) + (build-system r-build-system) + (propagated-inputs + `(("r-basilisk-utils" ,r-basilisk-utils) + ("r-dir-expiry" ,r-dir-expiry) + ("r-reticulate" ,r-reticulate))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/basilisk") + (synopsis "Freeze Python dependencies inside Bioconductor packages") + (description + "This package installs a self-contained Conda instance that is managed by +the R/Bioconductor installation machinery. This aims to provide a consistent +Python environment that can be used reliably by Bioconductor packages. +Functions are also provided to enable smooth interoperability of multiple +Python environments in a single R session.") + (license license:gpl3))) + (define-public r-tximeta (package (name "r-tximeta") |