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| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 80acaee764..321a9621f1 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3296,6 +3296,33 @@ Shiraishi-model signatures), computing weights that reflect the contributions of the signatures to the mutation load of the tumor.") (license license:gpl2))) +(define-public r-deconrnaseq + (package + (name "r-deconrnaseq") + (version "1.38.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "DeconRNASeq" version)) + (sha256 + (base32 + "10smk88srxm58hli0fhkdfd6l5z02q58xc9mww39gkn71y0127k6")))) + (properties `((upstream-name . "DeconRNASeq"))) + (build-system r-build-system) + (propagated-inputs + (list r-ggplot2 + r-limsolve + r-pcamethods)) + (home-page "https://bioconductor.org/packages/DeconRNASeq") + (synopsis + "Deconvolution of heterogeneous tissue samples for mRNA-Seq data") + (description + "DeconSeq is an R package for deconvolution of heterogeneous tissues +based on mRNA-Seq data. It models the expression levels from heterogeneous +cell populations in mRNA-Seq as the weighted average of expression from +different constituting cell types and predicted cell type proportions of +single expression profiles.") + (license license:gpl2))) + (define-public r-deconvr (package (name "r-deconvr") |