diff options
| -rw-r--r-- | gnu/packages/image-processing.scm | 63 |
1 files changed, 63 insertions, 0 deletions
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm index 9c084e111d..2f1f0ade59 100644 --- a/gnu/packages/image-processing.scm +++ b/gnu/packages/image-processing.scm @@ -36,6 +36,7 @@ #:use-module (gnu packages algebra) #:use-module (gnu packages bison) #:use-module (gnu packages boost) + #:use-module (gnu packages check) #:use-module (gnu packages compression) #:use-module (gnu packages documentation) #:use-module (gnu packages flex) @@ -60,6 +61,7 @@ #:use-module (gnu packages python) #:use-module (gnu packages python-xyz) #:use-module (gnu packages serialization) + #:use-module (gnu packages tbb) #:use-module (gnu packages tls) #:use-module (gnu packages video) #:use-module (gnu packages xiph) @@ -608,3 +610,64 @@ libraries designed for computer vision research and implementation.") `(#:configure-flags ;; Needed for itk-snap (list "-DVNL_CONFIG_LEGACY_METHODS=ON"))))) + +(define-public insight-toolkit + (package + (name "insight-toolkit") + (version "5.0.0") + (source + (origin + (method url-fetch) + (uri (string-append "https://github.com/InsightSoftwareConsortium/ITK/" + "releases/download/v" version "/InsightToolkit-" + version ".tar.xz")) + (sha256 + (base32 "0bs63mk4q8jmx38f031jy5w5n9yy5ng9x8ijwinvjyvas8cichqi")))) + (build-system cmake-build-system) + (arguments + `(#:tests? #f ; tests require network access and external data + #:configure-flags + '("-DITK_USE_GPU=ON" + "-DITK_USE_SYSTEM_LIBRARIES=ON" + "-DITK_USE_SYSTEM_GOOGLETEST=ON" + "-DITK_BUILD_SHARED=ON" + ;; This prevents "GTest::GTest" from being added to the ITK_LIBRARIES + ;; variable in the installed CMake files. This is necessary as other + ;; packages using insight-toolkit could not be configured otherwise. + "-DGTEST_ROOT=gtest") + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'do-not-tune + (lambda _ + (substitute* "CMake/ITKSetStandardCompilerFlags.cmake" + (("-mute=native") "")) + #t))))) + (inputs + `(("eigen" ,eigen) + ("expat" ,expat) + ("fftw" ,fftw) + ("fftwf" ,fftwf) + ("hdf5" ,hdf5) + ("libjpeg" ,libjpeg) + ("libpng" ,libpng) + ("libtiff" ,libtiff) + ("mesa" ,mesa-opencl) + ("perl" ,perl) + ("python" ,python) + ("tbb" ,tbb) + ("vxl" ,vxl-1) + ("zlib" ,zlib))) + (native-inputs + `(("googletest" ,googletest) + ("pkg-config" ,pkg-config))) + (home-page "https://github.com/InsightSoftwareConsortium/ITK/") + (synopsis "Scientific image processing, segmentation and registration") + (description "The Insight Toolkit (ITK) is a toolkit for N-dimensional +scientific image processing, segmentation, and registration. Segmentation is +the process of identifying and classifying data found in a digitally sampled +representation. Typically the sampled representation is an image acquired +from such medical instrumentation as CT or MRI scanners. Registration is the +task of aligning or developing correspondences between data. For example, in +the medical environment, a CT scan may be aligned with a MRI scan in order to +combine the information contained in both.") + (license license:asl2.0))) |