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| -rw-r--r-- | gnu/packages/bioconductor.scm | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a0ecec8498..67a62faa46 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2317,6 +2317,35 @@ reproducible gene expression signatures capable of accurately distinguishing tumor samples from healthy controls.") (license license:artistic2.0))) +(define-public r-assessorf + (package + (name "r-assessorf") + (version "1.14.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AssessORF" version)) + (sha256 + (base32 + "1l87bpny9k3jbzbzmb9h2ijvblrj471gqv26fyzbvb3vr6y406z7")))) + (properties `((upstream-name . "AssessORF"))) + (build-system r-build-system) + (propagated-inputs + (list r-biostrings + r-decipher + r-genomicranges + r-iranges)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/AssessORF") + (synopsis "Assess gene predictions using proteomics and evolutionary conservation") + (description + "In order to assess the quality of a set of predicted genes for a genome, +evidence must first be mapped to that genome. Next, each gene must be +categorized based on how strong the evidence is for or against that gene. The +AssessORF package provides the functions and class structures necessary for +accomplishing those tasks, using proteomics hits and evolutionarily conserved +start codons as the forms of evidence.") + (license license:gpl3))) + (define-public r-asset (package (name "r-asset") |