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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f7f2f4a52f..cf6d9f5c14 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -20317,6 +20317,52 @@ of statistics & QC, interaction with the Seurat object. Some functionalities require functions from CodeAndRoll and MarkdownReports libraries.") (license license:gpl3)))) +(define-public r-seuratextend + (let ((commit "5382e921f7b365c7b75b20d07cb455e4390fe36f") + (revision "1")) + (package + (name "r-seuratextend") + (version (git-version "1.0.7" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/huayc09/SeuratExtend") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1rlx20jyfdrymxn8b9dsf9n9jk9rwjjx1wy2f00layvd57g9ch2q")))) + (properties `((upstream-name . "SeuratExtend"))) + (build-system r-build-system) + (propagated-inputs (list r-biocmanager + r-dplyr + r-ggplot2 + r-ggpubr + r-glue + r-hdf5r + r-magrittr + r-mosaic + r-purrr + r-remotes + r-reshape2 + r-reticulate + r-rlist + r-scales + r-seurat + r-seuratextenddata + r-seuratobject + r-tidyr)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/huayc09/SeuratExtend") + (synopsis "Enhanced toolkit for scRNA-seq analysis") + (description + "This package is designed to improve and simplify the analysis of +scRNA-seq data. It uses the Seurat object for this purpose. It provides an +array of enhanced visualization tools, an integrated functional and pathway +analysis pipeline, seamless integration with popular Python tools, and a suite +of utility functions to aid in data manipulation and presentation.") + (license license:gpl3+)))) + (define-public r-seuratextenddata (let ((commit "e7f17d4bacca436705b06b2cd0c879f83add9271") (revision "1")) |