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-rw-r--r--gnu/packages/bioconductor.scm33
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 70ad6edc2f..6590f6eb5b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -7171,3 +7171,36 @@ has associated metadata, tags and date of modification. The client creates
and manages a local cache of files retrieved enabling quick and reproducible
access.")
(license license:artistic2.0)))
+
+(define-public r-multiassayexperiment
+ (package
+ (name "r-multiassayexperiment")
+ (version "1.12.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MultiAssayExperiment" version))
+ (sha256
+ (base32
+ "0hqg0b0hd5msnb4jcn1nbfyy1n1llfkipy2ivwncivkmbdn8psp4"))))
+ (properties
+ `((upstream-name . "MultiAssayExperiment")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
+ ("r-tidyr" ,r-tidyr)))
+ (home-page "http://waldronlab.io/MultiAssayExperiment/")
+ (synopsis "Integration of multi-omics experiments in Bioconductor")
+ (description
+ "MultiAssayExperiment harmonizes data management of multiple assays
+performed on an overlapping set of specimens. It provides a familiar
+Bioconductor user experience by extending concepts from
+@code{SummarizedExperiment}, supporting an open-ended mix of standard data
+classes for individual assays, and allowing subsetting by genomic ranges or
+rownames.")
+ (license license:artistic2.0)))