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authorRicardo Wurmus <rekado@elephly.net>2024-01-11 14:41:22 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-01-11 14:41:31 +0100
commit4ca94066f1a2faa63331fdc74c5f578842836fe6 (patch)
tree00e53e9bfba42de9f10b00b4967953bf4f854390 /tests/texlive.scm
parent6e21d78b32301da77daacd9ce63af547c233086b (diff)
downloadguix-4ca94066f1a2faa63331fdc74c5f578842836fe6.tar.gz
guix-4ca94066f1a2faa63331fdc74c5f578842836fe6.zip
gnu: r-genomicalignments: Update to 1.38.1.
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.38.1. Change-Id: I5309ec8dd3b464ba54bc94a7d0a5115cc38ecf40
Diffstat (limited to 'tests/texlive.scm')
0 files changed, 0 insertions, 0 deletions
;https://issues.guix.gnu.org/52831>. Make sure to install the en_US.utf8 fallback locale if the selected locale is not supported. * gnu/installer/final.scm (install-locale): New procedure. (install-system): Call it. Mathieu Othacehe 2022-01-14installer: Do not set the locale in run-command....Installing the locale inside the container, once the cow-store is mounted, causes the process to keep opened locale files that can later prevent the cow-store umount. * gnu/installer/utils.scm (run-command): Remove locale argument. * gnu/installer/final.scm (install-system): Adapt it. Mathieu Othacehe 2022-01-14installer: Remove an unused procedure....* gnu/installer/final.scm (kill-cow-users): Remove it. Mathieu Othacehe 2020-09-10installer: final: Introduce call-with-mnt-container....* gnu/installer/final.scm (call-with-mnt-container): New procedure, (install-system): use it instead of call-with-container, to make sure that the container is not jailed. Mathieu Othacehe 2020-09-02installer: Run the installation inside a container....When the store overlay is mounted, other processes such as kmscon, udev and guix-daemon may open files from the store, preventing the underlying install support from being umounted. See: https://lists.gnu.org/archive/html/guix-devel/2018-12/msg00161.html. To avoid this situation, mount the store overlay inside a container, and run the installation from within that container. * gnu/build/shepherd.scm (fork+exec-command/container): New procedure. * gnu/services/base.scm (guix-shepherd-service): Support an optional PID argument passed to the "start" method. If that argument is passed, ensure that guix-daemon enters the given PID MNT namespace by using fork+exec-command/container procedure. * gnu/installer/final.scm (umount-cow-store): Remove it, (install-system): run the installation from within a container. * gnu/installer/newt/final.scm (run-install-shell): Remove the display hack. Mathieu Othacehe 2020-06-16installer: final: Remove restart-service procedure....* gnu/installer/final.scm (umount-cow-store): Remove "restart-service" that is now provided by (gnu services herd). Mathieu Othacehe 2020-06-13install: final: Add some logging....* gnu/installer/final.scm (umount-cow-store): Add some logging. Mathieu Othacehe 2020-06-09installer: final: Dump "guix system init" command output when testing....When debugging the installation tests, it can be very handy to be able to read "guix system init" command output. * gnu/installer/final.scm (install-system): Dump installation command output to the console when running the installation tests. Mathieu Othacehe 2020-06-09installer: final: Remove left-over pk call....* gnu/installer/final.scm (kill-cow-users): Remove pk call. Mathieu Othacehe 2020-06-05installer: final: Add some extra logging....* gnu/installer/final.scm (kill-cow-users): Log the killed process name, (umount-cow-store): inform that we are umounting the cow-store. Mathieu Othacehe 2020-03-23installer: Fix cow-store umount issue....* gnu/installer/final.scm (kill-cow-users): Ignore exception that could be raised if a process disappears between reading its pid and its maps file. Mathieu Othacehe 2020-03-05installer: Fix cow-store umount....This fixes <https://bugs.gnu.org/39712>. The guix-daemon was preventing the cow-store umount, so restart it. Some udevd workers, using cow-store files might also still be around, so have some umount retries. * gnu/installer/final.scm (kill-cow-users): New procedure, (umount-cow-store): restart guix-daemon and kill all processes started from within the cow-store before trying to umount the store overlay. Also try 5 times to umount the overlay in case it is still busy. Mathieu Othacehe 2020-03-05installer: Honor /tmp/installer-system-init-options....* gnu/installer/final.scm (install-system): Honor "/tmp/installer-system-init-options". Ludovic Courtès 2020-03-05installer: Run commands without hopping through the shell....* gnu/installer/utils.scm (run-shell-command): Rename to... (run-command): Remove call to 'call-with-temporary-output-file' and hop through Bash. Expect COMMAND to be a list of strings rather than a string. * gnu/installer/final.scm (install-system): Turn INSTALL-COMMAND into a list of strings and pass it to 'run-command'. * gnu/installer/newt/page.scm (edit-file): Likewise. Ludovic Courtès 2020-02-12installer: Remove the cow-store overlay after system installation....Fixes <https://issues.guix.info/issue/39217>. Fixes <https://issues.guix.info/issue/38447>. * gnu/installer/final.scm (umount-cow-store): New procedure ..., (install-system): ... used here, to remove the store overlay so that the target device is not seen as busy during further umount calls. Mathieu Othacehe