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authorRicardo Wurmus <rekado@elephly.net>2023-03-30 13:55:40 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-03-30 13:55:40 +0200
commitfcc8b808e78ce66b9f2b55dfd432dcb97fdb3933 (patch)
tree8356736ae96ceb15f42e9f599517cb452190b0b2 /gnu
parent884daf0f4b46842fd0c988e1f5193b780722ec3f (diff)
downloadguix-fcc8b808e78ce66b9f2b55dfd432dcb97fdb3933.tar.gz
guix-fcc8b808e78ce66b9f2b55dfd432dcb97fdb3933.zip
gnu: Add r-champdata.
* gnu/packages/bioconductor.scm (r-champdata): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm20
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7690382dc7..3d2a1dba74 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1414,6 +1414,26 @@ curated cell type labels, for use in procedures like automated annotation of
single-cell data or deconvolution of bulk RNA-seq.")
(license license:gpl3)))
+(define-public r-champdata
+ (package
+ (name "r-champdata")
+ (version "2.30.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ChAMPdata" version 'experiment))
+ (sha256
+ (base32
+ "0rz762szfl02h4d3dj7ckd41ji9mdsja8nxqw6fl086z337041zw"))))
+ (properties `((upstream-name . "ChAMPdata")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biocgenerics r-genomicranges))
+ (home-page "https://bioconductor.org/packages/ChAMPdata")
+ (synopsis "Data packages for ChAMP package")
+ (description
+ "This package provides datasets needed for ChAMP including a test dataset
+and blood controls for CNA analysis.")
+ (license license:gpl3)))
+
(define-public r-chromstardata
(package
(name "r-chromstardata")