aboutsummaryrefslogtreecommitdiff
path: root/gnu
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2023-11-03 16:37:16 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-11-03 22:49:12 +0100
commitf625fab931bd601964113662a1b69d8e9fee998d (patch)
tree319772487a925daf6fd92f2ca27fc7aa7eedb9c3 /gnu
parentd79c200c1e0359b6f14a9b6b3676e984b783a507 (diff)
downloadguix-f625fab931bd601964113662a1b69d8e9fee998d.tar.gz
guix-f625fab931bd601964113662a1b69d8e9fee998d.zip
gnu: r-aneufinder: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.30.0. Change-Id: Ib57882838b947c014b2fad4c8c829d91c7aa6a17
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 15 insertions, 15 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3654fae09f..f2ba502d29 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3454,37 +3454,37 @@ create an alternative mapping from sequences.")
(define-public r-aneufinder
(package
(name "r-aneufinder")
- (version "1.28.0")
+ (version "1.30.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "AneuFinder" version))
(sha256
(base32
- "1l33yb20pynkvlla1dmgbwjhnhxh067fci0ciryxmbzqwq2sn1kc"))))
+ "0x7v60j1c1g12qlqxgshpmbnwzjbmlnkrfh60wl43inr0wyllq1l"))))
(build-system r-build-system)
(native-inputs
(list r-knitr))
(propagated-inputs
- (list r-genomicranges
- r-aneufinderdata
+ (list r-aneufinderdata
+ r-bamsignals
+ r-biocgenerics
+ r-biostrings
+ r-cowplot
+ r-dnacopy
+ r-doparallel
r-ecp
r-foreach
- r-doparallel
- r-biocgenerics
- r-s4vectors
r-genomeinfodb
- r-iranges
- r-rsamtools
- r-bamsignals
- r-dnacopy
- r-biostrings
r-genomicalignments
- r-ggplot2
- r-reshape2
+ r-genomicranges
r-ggdendro
+ r-ggplot2
r-ggrepel
+ r-iranges
r-mclust
- r-cowplot))
+ r-reshape2
+ r-rsamtools
+ r-s4vectors))
(home-page "https://bioconductor.org/packages/AneuFinder/")
(synopsis "Copy number variation analysis in single-cell-sequencing data")
(description "This package implements functions for copy number variant