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authorRicardo Wurmus <rekado@elephly.net>2023-03-30 14:40:01 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-03-30 14:40:01 +0200
commitcaf163536afa02844c49b21726758854f871ea7a (patch)
tree7cc597197f5f0b46df0570a6d416b1ccea268b42 /gnu
parent033955b4e8fbace7d3ddbf71eeeab63e07679b70 (diff)
downloadguix-caf163536afa02844c49b21726758854f871ea7a.tar.gz
guix-caf163536afa02844c49b21726758854f871ea7a.zip
gnu: Add r-maxprobes.
* gnu/packages/bioinformatics.scm (r-maxprobes): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d0bcee5260..f7adca0860 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14156,6 +14156,32 @@ spatial single-cell expression data.")
annotation 1.0B5.")
(license license:artistic2.0))))
+(define-public r-maxprobes
+ (let ((commit "c2120dba972e12115280ef274ff80550cee5b264")
+ (revision "1"))
+ (package
+ (name "r-maxprobes")
+ (version (git-version "0.0.2" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/markgene/maxprobes")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1kij9bds2l9mwm519bzyd2608563qjlmbrayhva1s0vgml5iq9wh"))))
+ (properties `((upstream-name . "maxprobes")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-minfi r-minfidata))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/markgene/maxprobes")
+ (synopsis "Methylation array cross-reactive probes")
+ (description
+ "The Maxprobes package collects cross-reactive probes of Illumina
+methylation array 450K and EPIC/850K.")
+ (license license:gpl2+))))
+
(define-public gffread
;; We cannot use the tagged release because it is not in sync with gclib.
;; See https://github.com/gpertea/gffread/issues/26