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author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-27 15:45:00 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-27 16:17:19 +0100 |
commit | b5b0a2ff493ba1a6a401522b7a34c73fa7c05134 (patch) | |
tree | 5dc80fd4509cf0b5448be428866a52c49fb16baf /gnu | |
parent | 83f43284c31f0cb83afb6210c3e07cc4954c1545 (diff) | |
download | guix-b5b0a2ff493ba1a6a401522b7a34c73fa7c05134.tar.gz guix-b5b0a2ff493ba1a6a401522b7a34c73fa7c05134.zip |
gnu: Add r-europepmc.
* gnu/packages/cran.scm (r-europepmc): New variable.
Diffstat (limited to 'gnu')
-rw-r--r-- | gnu/packages/cran.scm | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 43b738c377..92f9513de4 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -13303,3 +13303,38 @@ This focus has led to a lack of facilities for composing specialized plots. Thi package aims to be a collection of mainly new statistics and geometries that fills this gap.") (license license:expat))) + +(define-public r-europepmc + (package + (name "r-europepmc") + (version "0.3") + (source + (origin + (method url-fetch) + (uri (cran-uri "europepmc" version)) + (sha256 + (base32 + "1ngqs1sqzkbwv98dd5z4cxj8bnz41wyd0g060a2vpqi3s99s4i2h")))) + (build-system r-build-system) + (propagated-inputs + `(("r-dplyr" ,r-dplyr) + ("r-httr" ,r-httr) + ("r-jsonlite" ,r-jsonlite) + ("r-plyr" ,r-plyr) + ("r-progress" ,r-progress) + ("r-purrr" ,r-purrr) + ("r-urltools" ,r-urltools) + ("r-xml2" ,r-xml2))) + (home-page "https://github.com/ropensci/europepmc/") + (synopsis "R Interface to the Europe PubMed Central RESTful Web Service") + (description + "This package provides an R Client for the +@url{https://europepmc.org/RestfulWebService,Europe PubMed Central RESTful Web +Service}. It gives access to both metadata on life science literature and +open access full texts. Europe PMC indexes all PubMed content and other +literature sources including Agricola, a bibliographic database of citations +to the agricultural literature, or Biological Patents. In addition to +bibliographic metadata, the client allows users to fetch citations and +reference lists. Links between life-science literature and other EBI +databases, including ENA, PDB or ChEMBL are also accessible.") + (license license:gpl3))) |