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authorRicardo Wurmus <rekado@elephly.net>2020-06-13 01:13:00 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-06-13 01:20:02 +0200
commit9ae4bd0b77db21d3e352560511d974bcc15df5db (patch)
tree14123655ea8f3b605cd001f74824257f1ec90d5e /gnu
parent6b9e3b92c4730c48232a3740adccbf301cde4ebb (diff)
downloadguix-9ae4bd0b77db21d3e352560511d974bcc15df5db.tar.gz
guix-9ae4bd0b77db21d3e352560511d974bcc15df5db.zip
gnu: r-mzr: Update to 2.22.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.22.0. [native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 5 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 405cb9b724..f60a918d75 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9571,14 +9571,14 @@ proteomics packages.")
(define-public r-mzr
(package
(name "r-mzr")
- (version "2.20.0")
+ (version "2.22.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "mzR" version))
(sha256
(base32
- "1cwd7phlc5jbx6r6cznyfbdpvcin5fvsaasbbi65zn0s92a80r13"))
+ "1r8j8yiz5lcan7j4h37sza2kwczl48dxvld3da3ghjjq67cdc2cm"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -9600,7 +9600,7 @@ proteomics packages.")
#t)))))
(inputs
`(;; Our default boost package won't work here, unfortunately, even with
- ;; mzR version 2.20.0.
+ ;; mzR version 2.22.0.
("boost" ,boost-for-mysql) ; use this instead of the bundled boost sources
("zlib" ,zlib)))
(propagated-inputs
@@ -9611,6 +9611,8 @@ proteomics packages.")
("r-rcpp" ,r-rcpp)
("r-rhdf5lib" ,r-rhdf5lib)
("r-zlibbioc" ,r-zlibbioc)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/sneumann/mzR/")
(synopsis "Parser for mass spectrometry data files")
(description