aboutsummaryrefslogtreecommitdiff
path: root/gnu
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2023-05-09 14:45:13 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-05-09 15:24:14 +0200
commit7a58dc01d301cdc3d036bba92c0b9dc27a7fb9bb (patch)
tree0c1ab0b3593f78743d96d2dfbd0fddd672dc4da1 /gnu
parente2c47544a5087316551d7cc2e49ac7d9dbca62db (diff)
downloadguix-7a58dc01d301cdc3d036bba92c0b9dc27a7fb9bb.tar.gz
guix-7a58dc01d301cdc3d036bba92c0b9dc27a7fb9bb.zip
gnu: Add r-s4arrays.
* gnu/packages/bioconductor.scm (r-s4arrays): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm32
1 files changed, 32 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c8582bddbb..9ccebec76f 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -18211,6 +18211,38 @@ generated.")
routines.")
(license license:lgpl2.0+)))
+(define-public r-s4arrays
+ (package
+ (name "r-s4arrays")
+ (version "1.0.1")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "S4Arrays" version))
+ (sha256
+ (base32
+ "05nbdz8c2qfkbflbn5acf4bvdb20rj83nb4aii0c5v4zvxxrs3js"))))
+ (properties `((upstream-name . "S4Arrays")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics r-crayon r-iranges r-matrix r-s4vectors))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/S4Arrays")
+ (synopsis "Foundation of array-like containers in Bioconductor")
+ (description
+ "The S4Arrays package defines the @code{Array} virtual class to be
+extended by other S4 classes that wish to implement a container with an
+array-like semantic. It also provides:
+
+@enumerate
+@item low-level functionality meant to help the developer of such container to
+ implement basic operations like display, subsetting, or coercion of their
+ array-like objects to an ordinary matrix or array, and
+@item a framework that facilitates block processing of array-like
+ objects (typically on-disk objects).
+@end enumerate
+")
+ (license license:artistic2.0)))
+
(define-public r-s4vectors
(package
(name "r-s4vectors")