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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-11-11 13:49:12 +0000 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-11-11 15:39:19 +0000 |
| commit | 4052310e91456530f0b5362f5895255e36d53055 (patch) | |
| tree | 860dc5294d22cb37e900d985c6b985cf340720ac /gnu | |
| parent | b905d7c1d6b5ab6dc8363b142ae46069838bc200 (diff) | |
| download | guix-4052310e91456530f0b5362f5895255e36d53055.tar.gz guix-4052310e91456530f0b5362f5895255e36d53055.zip | |
gnu: Add biosoup.
* gnu/packages/bioinformatics.scm (biosoup): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a731b9af06..8139ce43de 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1323,6 +1323,37 @@ relying on a complex dependency tree.") (define-public python2-fastalite (package-with-python2 python-fastalite)) +(define-public biosoup + (package + (name "biosoup") + (version "0.10.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/rvaser/biosoup") + ;; Corresponds to version 0.10.0 + (commit "38181f09854ff42cbd9632200a2ec9fb37a4b7b6"))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "02hvyka703zagx0nvv2yx3dkc748zc8g6qbrpya7r8kfkcl7y8hw")))) + (build-system cmake-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "./bin/biosoup_test"))))))) + (native-inputs + `(("googletest" ,googletest))) + (home-page "https://github.com/rvaser/biosoup") + (synopsis "C++ support library for bioinformatics tools") + (description "Biosoup is a C++ collection of header-only data structures +used for storage and logging in bioinformatics tools.") + (license license:expat))) + (define-public ciri-long (package (name "ciri-long") |