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authorRicardo Wurmus <rekado@elephly.net>2024-11-27 17:08:38 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-12-03 16:59:55 +0100
commit041a02c2ad1349403a739f7ba85184e670c37ee5 (patch)
treecf59f824e77c4fa9ff0258e9e9d303371a351821 /gnu
parent6a03ed4b28c42c21a1db09007c184bae26452dba (diff)
downloadguix-041a02c2ad1349403a739f7ba85184e670c37ee5.tar.gz
guix-041a02c2ad1349403a739f7ba85184e670c37ee5.zip
gnu: Add r-derfinderdata.
* gnu/packages/bioconductor.scm (r-derfinderdata): New variable. Change-Id: I735030fad98b4eb20e0898d7f4779cd4c06ec82c
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm22
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d9744cf936..bb858dd100 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2203,6 +2203,28 @@ display copy number variation. Files are stored as GRanges objects from the
GenomicRanges Bioconductor package.")
(license license:gpl2)))
+(define-public r-derfinderdata
+ (package
+ (name "r-derfinderdata")
+ (version "2.24.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "derfinderData" version
+ 'experiment))
+ (sha256
+ (base32 "0rkc54gh3yasms4nrayi58ly2raad0ksid3wmzbmhy22zib4n9hy"))))
+ (properties `((upstream-name . "derfinderData")))
+ (build-system r-build-system)
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/leekgroup/derfinderData")
+ (synopsis "Processed BigWigs from BrainSpan for examples")
+ (description
+ "This package provides processed 22 samples from @code{BrainSpan} keeping
+only the information for chromosome 21. Data is stored in the @code{BigWig}
+format and is used for examples in other packages.")
+ (license license:artistic2.0)))
+
(define-public r-flowsorted-blood-450k
(package
(name "r-flowsorted-blood-450k")