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authorRicardo Wurmus <rekado@elephly.net>2023-04-27 21:48:12 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-04-29 20:09:30 +0200
commitec52655ce60d67a0e87d4b9c495c107f1c0a3be1 (patch)
tree7aba4c2774cf38a53a572b74f507cc8d8c6f669c /gnu/system/shadow.scm
parentcb8d080349a0691f4d563fcdd7bc8d8c40d0d88b (diff)
downloadguix-ec52655ce60d67a0e87d4b9c495c107f1c0a3be1.tar.gz
guix-ec52655ce60d67a0e87d4b9c495c107f1c0a3be1.zip
guix: Upgrade to Bioconductor 3.16.
* guix/build-system/r.scm (bioconductor-uri): Bump Bioconductor version to 3.17. * guix/import/cran.scm (%bioconductor-version): Same.
Diffstat (limited to 'gnu/system/shadow.scm')
0 files changed, 0 insertions, 0 deletions
register-path). * tests/store.scm ("register-path"): Remove. Ludovic Courtès 2018-06-14database: 'sqlite-register' takes a database, not a file name....* guix/store/database.scm (sqlite-register): Remove #:db-file and add 'db' parameter. Remove #:schema and 'parameterize'. (register-path): Wrap 'sqlite-register' call in 'with-database' and in 'parameterize'. * tests/store-database.scm ("new database") ("register-path with unregistered references"): Adjust accordingly. Ludovic Courtès 2018-06-14database: Fail registration when encountering unregistered references....* guix/store/database.scm (add-reference-sql): Remove nested SELECT. (add-references): Expect REFERENCES to be a list of ids. (sqlite-register): Call 'path-id' for each of REFERENCES and pass it to 'add-references'. * tests/store-database.scm ("register-path with unregistered references"): New test. Ludovic Courtès 2018-06-14database: 'with-database' can now initialize new databases....* nix/libstore/schema.sql: Rename to... * guix/store/schema.sql: ... this. * Makefile.am (nobase_dist_guilemodule_DATA): Add it. * nix/local.mk (%D%/libstore/schema.sql.hh): Adjust accordingly. * guix/store/database.scm (sql-schema): New variable. (sqlite-exec, initialize-database, call-with-database): New procedures. (with-database): Rewrite in terms of 'call-with-database'. * tests/store-database.scm ("new database"): New test. * guix/self.scm (compiled-guix)[*core-modules*]: Add 'schema.sql' to #:extra-files. Ludovic Courtès 2018-06-01Add (gnu store database)....* guix/config.scm.in (%store-database-directory): New variable. * guix/store/database.scm: New file. * tests/store-database.scm: New file. * Makefile.am (STORE_MODULES): New variable. (MODULES, MODULES_NOT_COMPILED): Adjust accordingly. (SCM_TESTS) [HAVE_GUILE_SQLITE3]: Add tests/store-database.scm. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Caleb Ristvedt